RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 ZSCAN26Q16670 478 aa12.66□□□□□ -0.38
NUDCD1-203ENST00000519607 COBLL1Q53SF7 1204 aa12.66□□□□□ -0.38
NUDCD1-203ENST00000519607 TXNRD3Q86VQ6 643 aa12.66□□□□□ -0.38
NUDCD1-203ENST00000519607 NOA1Q8NC60 698 aaKnown RBP12.66□□□□□ -0.38
NUDCD1-203ENST00000519607 CAGE1Q8TC20 777 aa12.66□□□□□ -0.38
NUDCD1-203ENST00000519607 DUSP9Q99956 384 aaKnown RBP12.66□□□□□ -0.38
NUDCD1-203ENST00000519607 VIPAS39Q9H9C1 493 aa12.66□□□□□ -0.38
NUDCD1-203ENST00000519607 ENC1O14682 589 aa12.65□□□□□ -0.38
NUDCD1-203ENST00000519607 ANKRD40Q6AI12 368 aa12.65□□□□□ -0.38
NUDCD1-203ENST00000519607 SV2BQ7L1I2 683 aa12.65□□□□□ -0.38
NUDCD1-203ENST00000519607 CCDC42Q96M95 316 aa12.65□□□□□ -0.38
NUDCD1-203ENST00000519607 ERGIC2Q96RQ1 377 aa12.65□□□□□ -0.38
NUDCD1-203ENST00000519607 RAB34Q9BZG1 259 aa12.65□□□□□ -0.38
NUDCD1-203ENST00000519607 TSPYL1Q9H0U9 437 aa12.65□□□□□ -0.38
NUDCD1-203ENST00000519607 AGPAT5Q9NUQ2 364 aa12.65□□□□□ -0.38
NUDCD1-203ENST00000519607 TRIM10Q9UDY6 481 aa12.65□□□□□ -0.38
NUDCD1-203ENST00000519607 hCG_1984214I3L0E3 225 aa12.65□□□□□ -0.38
NUDCD1-203ENST00000519607 ATP1A1P05023 1023 aaKnown RBP12.65□□□□□ -0.38
NUDCD1-203ENST00000519607 PLCG2P16885 1265 aa12.65□□□□□ -0.38
NUDCD1-203ENST00000519607 TECP42680 631 aa12.65□□□□□ -0.38
NUDCD1-203ENST00000519607 ZSCAN29Q8IWY8 852 aaPredicted RBP12.65□□□□□ -0.38
NUDCD1-203ENST00000519607 ZNF713Q8N859 430 aaPredicted RBP12.65□□□□□ -0.38
NUDCD1-203ENST00000519607 CDK5RAP3Q96JB5 506 aa12.65□□□□□ -0.38
NUDCD1-203ENST00000519607 EYA3Q99504 573 aa12.65□□□□□ -0.38
NUDCD1-203ENST00000519607 TTYH3Q9C0H2 523 aa12.65□□□□□ -0.38
NUDCD1-203ENST00000519607 LRRC27Q9C0I9 530 aa12.65□□□□□ -0.38
NUDCD1-203ENST00000519607 FLT1P17948 1338 aa12.65□□□□□ -0.38
NUDCD1-203ENST00000519607 TFRCP02786 760 aaKnown RBP12.64□□□□□ -0.39
NUDCD1-203ENST00000519607 GOLGA8HP0CJ92 632 aa12.64□□□□□ -0.39
NUDCD1-203ENST00000519607 RASA1P20936 1047 aa12.64□□□□□ -0.39
NUDCD1-203ENST00000519607 STK4Q13043 487 aa12.64□□□□□ -0.39
NUDCD1-203ENST00000519607 TMEM266Q2M3C6 531 aa12.64□□□□□ -0.39
NUDCD1-203ENST00000519607 CCDC84Q86UT8 332 aaPredicted RBP12.64□□□□□ -0.39
NUDCD1-203ENST00000519607 SECISBP2LQ93073 1101 aaKnown RBP12.64□□□□□ -0.39
NUDCD1-203ENST00000519607 JADE2Q9NQC1 790 aa12.64□□□□□ -0.39
NUDCD1-203ENST00000519607 STK17AQ9UEE5 414 aa12.64□□□□□ -0.39
NUDCD1-203ENST00000519607 COL24A1Q17RW2 1714 aa12.64□□□□□ -0.39
NUDCD1-203ENST00000519607 IVLP07476 585 aa12.64□□□□□ -0.39
NUDCD1-203ENST00000519607 IDEP14735 1019 aa12.64□□□□□ -0.39
NUDCD1-203ENST00000519607 ACTN2P35609 894 aa12.64□□□□□ -0.39
NUDCD1-203ENST00000519607 VAV2P52735 878 aa12.64□□□□□ -0.39
NUDCD1-203ENST00000519607 GYS2P54840 703 aa12.64□□□□□ -0.39
NUDCD1-203ENST00000519607 MAPKAPK5Q8IW41 473 aa12.64□□□□□ -0.39
NUDCD1-203ENST00000519607 REXO1Q8N1G1 1221 aaKnown RBP12.64□□□□□ -0.39
NUDCD1-203ENST00000519607 TRIM58Q8NG06 486 aa12.64□□□□□ -0.39
NUDCD1-203ENST00000519607 NEDD1Q8NHV4 660 aa12.64□□□□□ -0.39
NUDCD1-203ENST00000519607 HDAC6Q9UBN7 1215 aa12.64□□□□□ -0.39
NUDCD1-203ENST00000519607 RTCBQ9Y3I0 505 aaKnown RBP12.64□□□□□ -0.39
NUDCD1-203ENST00000519607 PVALEFA0A1B0GWK0 134 aa12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 ESYT2A0FGR8 921 aa12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 TACC1O75410 805 aa12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 CAPN2P17655 700 aa12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 CDK8P49336 464 aa12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 DIXDC1Q155Q3 683 aa12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 SLF2Q8IX21 1173 aa12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 FNBP4Q8N3X1 1017 aaPredicted RBP12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 SLC44A5Q8NCS7 719 aa12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 TBCKQ8TEA7 893 aa12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 MMS19Q96T76 1030 aa12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 SUGCTQ9HAC7 445 aa12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 SRP68Q9UHB9 627 aaKnown RBP12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 SAP30BPQ9UHR5 308 aaKnown RBP12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 IRS2Q9Y4H2 1338 aa12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 A0A0U1RQG5 324 aaPredicted RBP12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 GNPATO15228 680 aa12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 TM4SF1P30408 202 aa12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 TNNT3P45378 269 aaPredicted RBP12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 GRAPQ13588 217 aa12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 CCDC96Q2M329 555 aa12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 SLC35G1Q2M3R5 365 aa12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 C16orf86Q6ZW13 317 aa12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 GRAPLQ8TC17 118 aaPredicted RBP12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 CAPZA3Q96KX2 299 aa12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 DEF6Q9H4E7 631 aa12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 LRWD1Q9UFC0 647 aa12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 PLAGL2Q9UPG8 496 aa12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 FAN1Q9Y2M0 1017 aa12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 JRKLQ9Y4A0 524 aa12.63□□□□□ -0.39
NUDCD1-203ENST00000519607 ABCB11O95342 1321 aa12.62□□□□□ -0.39
NUDCD1-203ENST00000519607 MACROD2A1Z1Q3 448 aa12.62□□□□□ -0.39
NUDCD1-203ENST00000519607 FCER1AP12319 257 aa12.62□□□□□ -0.39
NUDCD1-203ENST00000519607 TXKP42681 527 aa12.62□□□□□ -0.39
NUDCD1-203ENST00000519607 KCNQ4P56696 695 aa12.62□□□□□ -0.39
NUDCD1-203ENST00000519607 CALCRLQ16602 461 aa12.62□□□□□ -0.39
NUDCD1-203ENST00000519607 VWA3BQ502W6 1294 aa12.62□□□□□ -0.39
NUDCD1-203ENST00000519607 MIIPQ5JXC2 388 aa12.62□□□□□ -0.39
NUDCD1-203ENST00000519607 CENPPQ6IPU0 288 aa12.62□□□□□ -0.39
NUDCD1-203ENST00000519607 UNC13DQ70J99 1090 aa12.62□□□□□ -0.39
NUDCD1-203ENST00000519607 CCDC24Q8N4L8 307 aa12.62□□□□□ -0.39
NUDCD1-203ENST00000519607 ALS2CR12Q96Q35 445 aa12.62□□□□□ -0.39
NUDCD1-203ENST00000519607 VAT1LQ9HCJ6 419 aa12.62□□□□□ -0.39
NUDCD1-203ENST00000519607 SRGAP2O75044 1071 aa12.62□□□□□ -0.39
NUDCD1-203ENST00000519607 HNRNPH3P31942 346 aaKnown RBP12.62□□□□□ -0.39
NUDCD1-203ENST00000519607 BTDP43251 543 aa12.62□□□□□ -0.39
NUDCD1-203ENST00000519607 LRRC63Q05C16 580 aa12.62□□□□□ -0.39
NUDCD1-203ENST00000519607 MAN2A1Q16706 1144 aa12.62□□□□□ -0.39
NUDCD1-203ENST00000519607 USP17L2Q6R6M4 530 aa12.62□□□□□ -0.39
NUDCD1-203ENST00000519607 TEX11Q8IYF3 940 aa12.62□□□□□ -0.39
NUDCD1-203ENST00000519607 LARP4BQ92615 738 aaKnown RBP12.62□□□□□ -0.39
NUDCD1-203ENST00000519607 EEF2KMTQ96G04 330 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms