RNA–Protein interactions for RNA: ENST00000515215.6

SNCAIP-221, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,708 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-221ENST00000515215 GTF2A2P52657 109 aa14.29□□□□□ -0.12
SNCAIP-221ENST00000515215 ATP2C1P98194 919 aaPredicted RBP14.29□□□□□ -0.12
SNCAIP-221ENST00000515215 MUM1L1Q5H9M0 696 aa14.29□□□□□ -0.12
SNCAIP-221ENST00000515215 SAPCD2Q86UD0 394 aa14.29□□□□□ -0.12
SNCAIP-221ENST00000515215 JMYQ8N9B5 988 aa14.29□□□□□ -0.12
SNCAIP-221ENST00000515215 SMC1BQ8NDV3 1235 aa14.29□□□□□ -0.12
SNCAIP-221ENST00000515215 FBXO2Q9UK22 296 aaPredicted RBP14.29□□□□□ -0.12
SNCAIP-221ENST00000515215 RIPK3Q9Y572 518 aa14.29□□□□□ -0.12
SNCAIP-221ENST00000515215 CTDP1Q9Y5B0 961 aaPredicted RBP14.29□□□□□ -0.12
SNCAIP-221ENST00000515215 MRVI1Q9Y6F6 885 aa14.29□□□□□ -0.12
SNCAIP-221ENST00000515215 A0A1W2PQ27 194 aa14.28□□□□□ -0.12
SNCAIP-221ENST00000515215 A0A1W2PQ64 194 aa14.28□□□□□ -0.12
SNCAIP-221ENST00000515215 A0A1W2PQD8 194 aa14.28□□□□□ -0.12
SNCAIP-221ENST00000515215 GCOM1H8Y6P7 765 aaPredicted RBP14.28□□□□□ -0.12
SNCAIP-221ENST00000515215 CFBP00751 764 aa14.28□□□□□ -0.12
SNCAIP-221ENST00000515215 POLR2MP0CAP2 368 aa14.28□□□□□ -0.12
SNCAIP-221ENST00000515215 CETPP11597 493 aa14.28□□□□□ -0.12
SNCAIP-221ENST00000515215 HOXA13P31271 388 aaPredicted RBP14.28□□□□□ -0.12
SNCAIP-221ENST00000515215 MCM7P33993 719 aa14.28□□□□□ -0.12
SNCAIP-221ENST00000515215 HERVK_113P62684 666 aa14.28□□□□□ -0.12
SNCAIP-221ENST00000515215 IRX3P78415 501 aaPredicted RBP14.28□□□□□ -0.12
SNCAIP-221ENST00000515215 PTGDRQ13258 359 aa14.28□□□□□ -0.12
SNCAIP-221ENST00000515215 PABPC4Q13310 644 aaKnown RBP eCLIP14.28□□□□□ -0.12
SNCAIP-221ENST00000515215 ORC2Q13416 577 aaPredicted RBP14.28□□□□□ -0.12
SNCAIP-221ENST00000515215 MB21D1Q8N884 522 aa14.28□□□□□ -0.12
SNCAIP-221ENST00000515215 BRI3BPQ8WY22 251 aa14.28□□□□□ -0.12
SNCAIP-221ENST00000515215 TEX13BQ9BXU2 312 aa14.28□□□□□ -0.12
SNCAIP-221ENST00000515215 GOLGA6L4A6NEF3 574 aa14.27□□□□□ -0.12
SNCAIP-221ENST00000515215 MKRN3Q13064 507 aaKnown RBP14.27□□□□□ -0.12
SNCAIP-221ENST00000515215 LETM2Q2VYF4 491 aa14.27□□□□□ -0.12
SNCAIP-221ENST00000515215 SNRNP48Q6IEG0 339 aaKnown RBP14.27□□□□□ -0.12
SNCAIP-221ENST00000515215 MCF2L2Q86YR7 1114 aa14.27□□□□□ -0.12
SNCAIP-221ENST00000515215 RASAL3Q86YV0 1011 aa14.27□□□□□ -0.12
SNCAIP-221ENST00000515215 SAMD3Q8N6K7 520 aa14.27□□□□□ -0.12
SNCAIP-221ENST00000515215 TRERF1Q96PN7 1200 aa14.27□□□□□ -0.12
SNCAIP-221ENST00000515215 BTBD7Q9P203 1132 aa14.27□□□□□ -0.12
SNCAIP-221ENST00000515215 SLC45A1Q9Y2W3 748 aa14.27□□□□□ -0.12
SNCAIP-221ENST00000515215 SRPRBQ9Y5M8 271 aaKnown RBP14.27□□□□□ -0.12
SNCAIP-221ENST00000515215 CCL15-CCL14A0A0B4J2E2 113 aa14.27□□□□□ -0.13
SNCAIP-221ENST00000515215 SPDYE3A6NKU9 549 aa14.27□□□□□ -0.13
SNCAIP-221ENST00000515215 CUTAO60888 179 aa14.27□□□□□ -0.13
SNCAIP-221ENST00000515215 CNMDO75829 334 aa14.27□□□□□ -0.13
SNCAIP-221ENST00000515215 LIG1P18858 919 aa14.27□□□□□ -0.13
SNCAIP-221ENST00000515215 OSBPP22059 807 aa14.27□□□□□ -0.13
SNCAIP-221ENST00000515215 SREBF1P36956 1147 aa14.27□□□□□ -0.13
SNCAIP-221ENST00000515215 STAT3P40763 770 aa14.27□□□□□ -0.13
SNCAIP-221ENST00000515215 GRIN1Q05586 938 aa14.27□□□□□ -0.13
SNCAIP-221ENST00000515215 CCL15Q16663 113 aa14.27□□□□□ -0.13
SNCAIP-221ENST00000515215 TKFCQ3LXA3 575 aa14.27□□□□□ -0.13
SNCAIP-221ENST00000515215 PPP4R3AQ6IN85 833 aa14.27□□□□□ -0.13
SNCAIP-221ENST00000515215 KRI1Q8N9T8 703 aaKnown RBP14.27□□□□□ -0.13
SNCAIP-221ENST00000515215 TMEM60Q9H2L4 133 aa14.27□□□□□ -0.13
SNCAIP-221ENST00000515215 HOMER2Q9NSB8 354 aa14.27□□□□□ -0.13
SNCAIP-221ENST00000515215 RNF146Q9NTX7 359 aa14.27□□□□□ -0.13
SNCAIP-221ENST00000515215 MAP3K20Q9NYL2 800 aaKnown RBP14.27□□□□□ -0.13
SNCAIP-221ENST00000515215 BTBD19C9JJ37 291 aa14.26□□□□□ -0.13
SNCAIP-221ENST00000515215 CCNT1O60563 726 aaKnown RBP14.26□□□□□ -0.13
SNCAIP-221ENST00000515215 TOMM70O94826 608 aa14.26□□□□□ -0.13
SNCAIP-221ENST00000515215 USP11P51784 963 aa14.26□□□□□ -0.13
SNCAIP-221ENST00000515215 TPRNQ4KMQ1 711 aa14.26□□□□□ -0.13
SNCAIP-221ENST00000515215 ARL6IP4Q66PJ3 421 aaKnown RBP14.26□□□□□ -0.13
SNCAIP-221ENST00000515215 MBOAT7Q96N66 472 aa14.26□□□□□ -0.13
SNCAIP-221ENST00000515215 CLIC6Q96NY7 704 aa14.26□□□□□ -0.13
SNCAIP-221ENST00000515215 GOLPH3LQ9H4A5 285 aa14.26□□□□□ -0.13
SNCAIP-221ENST00000515215 COL20A1Q9P218 1284 aa14.26□□□□□ -0.13
SNCAIP-221ENST00000515215 TLL2Q9Y6L7 1015 aa14.26□□□□□ -0.13
SNCAIP-221ENST00000515215 LCTP09848 1927 aa14.26□□□□□ -0.13
SNCAIP-221ENST00000515215 CYP3A7-CYP3A51PA0A087WV96 503 aa14.25□□□□□ -0.13
SNCAIP-221ENST00000515215 TESPA1A2RU30 521 aaPredicted RBP14.25□□□□□ -0.13
SNCAIP-221ENST00000515215 LAD1O00515 517 aa14.25□□□□□ -0.13
SNCAIP-221ENST00000515215 PEX10O60683 326 aa14.25□□□□□ -0.13
SNCAIP-221ENST00000515215 TDP2O95551 362 aa14.25□□□□□ -0.13
SNCAIP-221ENST00000515215 CMA1P23946 247 aa14.25□□□□□ -0.13
SNCAIP-221ENST00000515215 CYP3A7P24462 503 aa14.25□□□□□ -0.13
SNCAIP-221ENST00000515215 ARHGAP4P98171 946 aa14.25□□□□□ -0.13
SNCAIP-221ENST00000515215 RGMBQ6NW40 437 aa14.25□□□□□ -0.13
SNCAIP-221ENST00000515215 SHC4Q6S5L8 630 aa14.25□□□□□ -0.13
SNCAIP-221ENST00000515215 MOXD1Q6UVY6 613 aa14.25□□□□□ -0.13
SNCAIP-221ENST00000515215 ANKRD23Q86SG2 305 aa14.25□□□□□ -0.13
SNCAIP-221ENST00000515215 FCHSD1Q86WN1 690 aa14.25□□□□□ -0.13
SNCAIP-221ENST00000515215 RIOX2Q8IUF8 465 aa14.25□□□□□ -0.13
SNCAIP-221ENST00000515215 CCAR1Q8IX12 1150 aaKnown RBP14.25□□□□□ -0.13
SNCAIP-221ENST00000515215 ZNF579Q8NAF0 562 aaKnown RBP14.25□□□□□ -0.13
SNCAIP-221ENST00000515215 MRPS27Q92552 414 aaKnown RBP14.25□□□□□ -0.13
SNCAIP-221ENST00000515215 FERMT2Q96AC1 680 aa14.25□□□□□ -0.13
SNCAIP-221ENST00000515215 TMEM63CQ9P1W3 806 aa14.25□□□□□ -0.13
SNCAIP-221ENST00000515215 PNMA3Q9UL41 463 aa14.25□□□□□ -0.13
SNCAIP-221ENST00000515215 FAM237AA0A1B0GTK4 181 aa14.24□□□□□ -0.13
SNCAIP-221ENST00000515215 SLC37A4O43826 429 aa14.24□□□□□ -0.13
SNCAIP-221ENST00000515215 NEMFO60524 1076 aa14.24□□□□□ -0.13
SNCAIP-221ENST00000515215 CYP3A4P08684 503 aa14.24□□□□□ -0.13
SNCAIP-221ENST00000515215 GCFC2P16383 781 aaKnown RBP14.24□□□□□ -0.13
SNCAIP-221ENST00000515215 PRPHP41219 470 aa14.24□□□□□ -0.13
SNCAIP-221ENST00000515215 ZNF157P51786 506 aaPredicted RBP14.24□□□□□ -0.13
SNCAIP-221ENST00000515215 RPS6P62753 249 aaKnown RBP14.24□□□□□ -0.13
SNCAIP-221ENST00000515215 IL17AQ16552 155 aa14.24□□□□□ -0.13
SNCAIP-221ENST00000515215 RESP18Q5W5W9 173 aa14.24□□□□□ -0.13
SNCAIP-221ENST00000515215 CAVIN1Q6NZI2 390 aaKnown RBP14.24□□□□□ -0.13
SNCAIP-221ENST00000515215 FSIP1Q8NA03 581 aa14.24□□□□□ -0.13
SNCAIP-221ENST00000515215 ENGASEQ8NFI3 743 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms