RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 PGBD3Q8N328 593 aa8.02□□□□□ -1.12
NIPBL-208ENST00000514335 LMBR1Q8WVP7 490 aa8.02□□□□□ -1.12
NIPBL-208ENST00000514335 TEKT4Q8WW24 435 aa8.02□□□□□ -1.12
NIPBL-208ENST00000514335 NTPCRQ9BSD7 190 aaKnown RBP8.02□□□□□ -1.12
NIPBL-208ENST00000514335 B3GNT4Q9C0J1 378 aa8.02□□□□□ -1.12
NIPBL-208ENST00000514335 ANO2Q9NQ90 1003 aa8.02□□□□□ -1.12
NIPBL-208ENST00000514335 PAIP2BQ9ULR5 123 aaKnown RBP8.02□□□□□ -1.12
NIPBL-208ENST00000514335 EFR3BQ9Y2G0 817 aa8.02□□□□□ -1.12
NIPBL-208ENST00000514335 ATP5DP30049 168 aa8.02□□□□□ -1.13
NIPBL-208ENST00000514335 PHEXP78562 749 aa8.02□□□□□ -1.13
NIPBL-208ENST00000514335 TRIM28Q13263 835 aaKnown RBP8.02□□□□□ -1.13
NIPBL-208ENST00000514335 BEND6Q5SZJ8 279 aaPredicted RBP8.02□□□□□ -1.13
NIPBL-208ENST00000514335 CCDC121Q6ZUS5 278 aa8.02□□□□□ -1.13
NIPBL-208ENST00000514335 SPERTQ8NA61 448 aa8.02□□□□□ -1.13
NIPBL-208ENST00000514335 ZNF397Q8NF99 534 aaPredicted RBP8.02□□□□□ -1.13
NIPBL-208ENST00000514335 ZKSCAN4Q969J2 545 aaPredicted RBP8.02□□□□□ -1.13
NIPBL-208ENST00000514335 ZSWIM6Q9HCJ5 1215 aa8.02□□□□□ -1.13
NIPBL-208ENST00000514335 PCDH18Q9HCL0 1135 aa8.02□□□□□ -1.13
NIPBL-208ENST00000514335 GOLGA6L10A6NI86 522 aa8.02□□□□□ -1.13
NIPBL-208ENST00000514335 RNGTTO60942 597 aaKnown RBP8.02□□□□□ -1.13
NIPBL-208ENST00000514335 LARGE1O95461 756 aa8.02□□□□□ -1.13
NIPBL-208ENST00000514335 DNAJB2P25686 324 aa8.02□□□□□ -1.13
NIPBL-208ENST00000514335 NFKBIAP25963 317 aa8.02□□□□□ -1.13
NIPBL-208ENST00000514335 DDX10Q13206 875 aaKnown RBP8.02□□□□□ -1.13
NIPBL-208ENST00000514335 G3BP1Q13283 466 aaKnown RBP eCLIP8.02□□□□□ -1.13
NIPBL-208ENST00000514335 NAA25Q14CX7 972 aa8.02□□□□□ -1.13
NIPBL-208ENST00000514335 LRRFIP1Q32MZ4 808 aaKnown RBP8.02□□□□□ -1.13
NIPBL-208ENST00000514335 ADALQ6DHV7 355 aa8.02□□□□□ -1.13
NIPBL-208ENST00000514335 KRT27Q7Z3Y8 459 aa8.02□□□□□ -1.13
NIPBL-208ENST00000514335 UTP14AQ9BVJ6 771 aaKnown RBP8.02□□□□□ -1.13
NIPBL-208ENST00000514335 PAPOLBQ9NRJ5 636 aaKnown RBP8.02□□□□□ -1.13
NIPBL-208ENST00000514335 ZRANB1Q9UGI0 708 aa8.02□□□□□ -1.13
NIPBL-208ENST00000514335 PHF24Q9UPV7 400 aa8.02□□□□□ -1.13
NIPBL-208ENST00000514335 A0A087WUV0 522 aaPredicted RBP8.01□□□□□ -1.13
NIPBL-208ENST00000514335 FAM221BA6H8Z2 402 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 DDX11L8A8MPP1 907 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 PRRT4C9JH25 899 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 TOR1BO14657 336 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 NBNO60934 754 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 FBXO21O94952 628 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 GCLCP48506 637 aaPredicted RBP8.01□□□□□ -1.13
NIPBL-208ENST00000514335 TNIP1Q15025 636 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 FAM83BQ5T0W9 1011 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 METTL11BQ5VVY1 283 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 MAATS1Q7Z4T9 603 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 RSPH3Q86UC2 560 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 DGKHQ86XP1 1220 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 SIX5Q8N196 739 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 MAML3Q96JK9 1138 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 TCEANC2Q96MN5 208 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 ALS2CR12Q96Q35 445 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 NR1H4Q96RI1 486 aaPredicted RBP8.01□□□□□ -1.13
NIPBL-208ENST00000514335 BRINP2Q9C0B6 783 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 KANSL2Q9H9L4 492 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 HOOK1Q9UJC3 728 aaKnown RBP8.01□□□□□ -1.13
NIPBL-208ENST00000514335 TSKSQ9UJT2 592 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 EXOC6BQ9Y2D4 811 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 TMED5Q9Y3A6 229 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 PAPPAQ13219 1627 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 PDLIM1O00151 329 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 POLR3GO15318 223 aaPredicted RBP8.01□□□□□ -1.13
NIPBL-208ENST00000514335 IVLP07476 585 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 ATP2B2Q01814 1243 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 ROR2Q01974 943 aaKnown RBP8.01□□□□□ -1.13
NIPBL-208ENST00000514335 MTX1Q13505 466 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 IGSF11Q5DX21 431 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 LRRTM3Q86VH5 581 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 FAM20CQ8IXL6 584 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 KIAA1524Q8TCG1 905 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 ATP6V0A1Q93050 837 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 GIMAP5Q96F15 307 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 NLRP3Q96P20 1036 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 AATFQ9NY61 560 aaKnown RBP eCLIP8.01□□□□□ -1.13
NIPBL-208ENST00000514335 HESX1Q9UBX0 185 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 MYO6Q9UM54 1294 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 PTPRCP08575 1304 aa8.01□□□□□ -1.13
NIPBL-208ENST00000514335 TMEM247A6NEH6 219 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 GNPATO15228 680 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 TTI1O43156 1089 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 ZW10O43264 779 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 EVI5O60447 810 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 DNAJC6O75061 913 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 DDX5P17844 614 aaKnown RBP8□□□□□ -1.13
NIPBL-208ENST00000514335 HSD3B2P26439 372 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 ACTN2P35609 894 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 PSMD7P51665 324 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 MRPS35P82673 323 aaKnown RBP8□□□□□ -1.13
NIPBL-208ENST00000514335 FOXK1P85037 733 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 ROR1Q01973 937 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 PRKG1Q13976 671 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 VPS72Q15906 364 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 MAJINQ3KP22 176 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 ZNF831Q5JPB2 1677 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 NBPF14Q5TI25 921 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 DPY19L2Q6NUT2 758 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 C3orf67Q6ZVT6 689 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 C17orf53Q8N3J3 647 aaPredicted RBP8□□□□□ -1.13
NIPBL-208ENST00000514335 ZBTB8BQ8NAP8 495 aaPredicted RBP8□□□□□ -1.13
NIPBL-208ENST00000514335 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms