RNA–Protein interactions for RNA: ENST00000513159.5

PTPN20-227, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-227ENST00000513159 SYTL5Q8TDW5 730 aaPredicted RBP11.94□□□□□ -0.5
PTPN20-227ENST00000513159 TRIB2Q92519 343 aa11.94□□□□□ -0.5
PTPN20-227ENST00000513159 NUDT12Q9BQG2 462 aa11.94□□□□□ -0.5
PTPN20-227ENST00000513159 BARHL2Q9NY43 387 aa11.94□□□□□ -0.5
PTPN20-227ENST00000513159 SEC63Q9UGP8 760 aaKnown RBP11.94□□□□□ -0.5
PTPN20-227ENST00000513159 MRPL11Q9Y3B7 192 aaKnown RBP11.94□□□□□ -0.5
PTPN20-227ENST00000513159 DOCK5Q9H7D0 1870 aa11.93□□□□□ -0.5
PTPN20-227ENST00000513159 FRMPD3Q5JV73 1810 aa11.93□□□□□ -0.5
PTPN20-227ENST00000513159 CPLX1O14810 134 aa11.93□□□□□ -0.5
PTPN20-227ENST00000513159 XRCC5P13010 732 aaKnown RBP11.93□□□□□ -0.5
PTPN20-227ENST00000513159 ELNP15502 786 aa11.93□□□□□ -0.5
PTPN20-227ENST00000513159 HOXA13P31271 388 aaPredicted RBP11.93□□□□□ -0.5
PTPN20-227ENST00000513159 KCTD2Q14681 263 aa11.93□□□□□ -0.5
PTPN20-227ENST00000513159 USP17L6PQ6QN14 398 aa11.93□□□□□ -0.5
PTPN20-227ENST00000513159 CCAR1Q8IX12 1150 aaKnown RBP11.93□□□□□ -0.5
PTPN20-227ENST00000513159 ANKRD35Q8N283 1001 aa11.93□□□□□ -0.5
PTPN20-227ENST00000513159 SOCS4Q8WXH5 440 aa11.93□□□□□ -0.5
PTPN20-227ENST00000513159 DDX11Q96FC9 970 aa11.93□□□□□ -0.5
PTPN20-227ENST00000513159 MAML3Q96JK9 1138 aa11.93□□□□□ -0.5
PTPN20-227ENST00000513159 TAAR1Q96RJ0 339 aa11.93□□□□□ -0.5
PTPN20-227ENST00000513159 VPS54Q9P1Q0 977 aa11.93□□□□□ -0.5
PTPN20-227ENST00000513159 ORC3Q9UBD5 711 aaPredicted RBP11.93□□□□□ -0.5
PTPN20-227ENST00000513159 PNMA2Q9UL42 364 aa11.93□□□□□ -0.5
PTPN20-227ENST00000513159 IVNS1ABPQ9Y6Y0 642 aa11.93□□□□□ -0.5
PTPN20-227ENST00000513159 EDIL3O43854 480 aa11.92□□□□□ -0.5
PTPN20-227ENST00000513159 ADCY3O60266 1144 aa11.92□□□□□ -0.5
PTPN20-227ENST00000513159 DEXIO95424 95 aa11.92□□□□□ -0.5
PTPN20-227ENST00000513159 CFBP00751 764 aa11.92□□□□□ -0.5
PTPN20-227ENST00000513159 RGS2P41220 211 aa11.92□□□□□ -0.5
PTPN20-227ENST00000513159 MCM2P49736 904 aa11.92□□□□□ -0.5
PTPN20-227ENST00000513159 UBE2SQ16763 222 aa11.92□□□□□ -0.5
PTPN20-227ENST00000513159 RNF207Q6ZRF8 634 aa11.92□□□□□ -0.5
PTPN20-227ENST00000513159 APBA2Q99767 749 aa11.92□□□□□ -0.5
PTPN20-227ENST00000513159 LLPHQ9BRT6 129 aaKnown RBP11.92□□□□□ -0.5
PTPN20-227ENST00000513159 MCOLN1Q9GZU1 580 aa11.92□□□□□ -0.5
PTPN20-227ENST00000513159 ZMYND12Q9H0C1 365 aa11.92□□□□□ -0.5
PTPN20-227ENST00000513159 PFASO15067 1338 aa11.91□□□□□ -0.5
PTPN20-227ENST00000513159 ESYT2A0FGR8 921 aa11.91□□□□□ -0.5
PTPN20-227ENST00000513159 SMCO2A6NFE2 343 aa11.91□□□□□ -0.5
PTPN20-227ENST00000513159 POTEB2H3BUK9 544 aa11.91□□□□□ -0.5
PTPN20-227ENST00000513159 hCG_1984214I3L0E3 225 aa11.91□□□□□ -0.5
PTPN20-227ENST00000513159 K7ELQ4 463 aaPredicted RBP11.91□□□□□ -0.5
PTPN20-227ENST00000513159 M0R2N6 131 aa11.91□□□□□ -0.5
PTPN20-227ENST00000513159 PIK3CDO00329 1044 aa11.91□□□□□ -0.5
PTPN20-227ENST00000513159 SNAI1O95863 264 aaPredicted RBP11.91□□□□□ -0.5
PTPN20-227ENST00000513159 CALML3P27482 149 aa11.91□□□□□ -0.5
PTPN20-227ENST00000513159 HOXD10P28358 340 aa11.91□□□□□ -0.5
PTPN20-227ENST00000513159 CLK2P49760 499 aaKnown RBP11.91□□□□□ -0.5
PTPN20-227ENST00000513159 NAPAP54920 295 aa11.91□□□□□ -0.5
PTPN20-227ENST00000513159 PRMT2P55345 433 aa11.91□□□□□ -0.5
PTPN20-227ENST00000513159 FBXO46Q6PJ61 603 aaPredicted RBP11.91□□□□□ -0.5
PTPN20-227ENST00000513159 DPP9Q86TI2 863 aa11.91□□□□□ -0.5
PTPN20-227ENST00000513159 ZNF713Q8N859 430 aaPredicted RBP11.91□□□□□ -0.5
PTPN20-227ENST00000513159 TRPV1Q8NER1 839 aa11.91□□□□□ -0.5
PTPN20-227ENST00000513159 IL31RAQ8NI17 732 aa11.91□□□□□ -0.5
PTPN20-227ENST00000513159 SH3TC2Q8TF17 1288 aa11.91□□□□□ -0.5
PTPN20-227ENST00000513159 MAF1Q9H063 256 aa11.91□□□□□ -0.5
PTPN20-227ENST00000513159 KATNBL1Q9H079 304 aa11.91□□□□□ -0.5
PTPN20-227ENST00000513159 RIC8AQ9NPQ8 531 aa11.91□□□□□ -0.5
PTPN20-227ENST00000513159 RBM27Q9P2N5 1060 aaKnown RBP11.91□□□□□ -0.5
PTPN20-227ENST00000513159 KCNJ14Q9UNX9 436 aa11.91□□□□□ -0.5
PTPN20-227ENST00000513159 DIS3Q9Y2L1 958 aaKnown RBP11.91□□□□□ -0.5
PTPN20-227ENST00000513159 BRCA2P51587 3418 aa11.91□□□□□ -0.5
PTPN20-227ENST00000513159 CDKL5O76039 1030 aa11.9□□□□□ -0.5
PTPN20-227ENST00000513159 EDNRBP24530 442 aa11.9□□□□□ -0.5
PTPN20-227ENST00000513159 CYP2C19P33261 490 aa11.9□□□□□ -0.5
PTPN20-227ENST00000513159 ARHGEF6Q15052 776 aa11.9□□□□□ -0.5
PTPN20-227ENST00000513159 PRAMEF19Q5SWL8 479 aa11.9□□□□□ -0.5
PTPN20-227ENST00000513159 MAP3K21Q5TCX8 1036 aa11.9□□□□□ -0.5
PTPN20-227ENST00000513159 OLFML2BQ68BL8 750 aa11.9□□□□□ -0.5
PTPN20-227ENST00000513159 PPP1R18Q6NYC8 613 aa11.9□□□□□ -0.5
PTPN20-227ENST00000513159 CPLX2Q6PUV4 134 aaKnown RBP11.9□□□□□ -0.5
PTPN20-227ENST00000513159 MAMDC4Q6UXC1 1216 aa11.9□□□□□ -0.5
PTPN20-227ENST00000513159 ZNF467Q7Z7K2 595 aaPredicted RBP11.9□□□□□ -0.5
PTPN20-227ENST00000513159 MCF2L2Q86YR7 1114 aa11.9□□□□□ -0.5
PTPN20-227ENST00000513159 TRIM22Q8IYM9 498 aa11.9□□□□□ -0.5
PTPN20-227ENST00000513159 RAET1EQ8TD07 263 aa11.9□□□□□ -0.5
PTPN20-227ENST00000513159 RASGRP4Q8TDF6 673 aa11.9□□□□□ -0.5
PTPN20-227ENST00000513159 MORC4Q8TE76 937 aa11.9□□□□□ -0.5
PTPN20-227ENST00000513159 PXYLP1Q8TE99 480 aa11.9□□□□□ -0.5
PTPN20-227ENST00000513159 ALG1Q9BT22 464 aa11.9□□□□□ -0.5
PTPN20-227ENST00000513159 PHF20Q9BVI0 1012 aa11.9□□□□□ -0.5
PTPN20-227ENST00000513159 PSTPIP2Q9H939 334 aa11.9□□□□□ -0.5
PTPN20-227ENST00000513159 CWC22Q9HCG8 908 aaKnown RBP11.9□□□□□ -0.5
PTPN20-227ENST00000513159 TMEM260Q9NX78 707 aa11.9□□□□□ -0.5
PTPN20-227ENST00000513159 FRMPD4Q14CM0 1322 aa11.89□□□□□ -0.51
PTPN20-227ENST00000513159 RPTORQ8N122 1335 aa11.89□□□□□ -0.51
PTPN20-227ENST00000513159 GCOM1H8Y6P7 765 aaPredicted RBP11.89□□□□□ -0.51
PTPN20-227ENST00000513159 POLR2MP0CAP2 368 aa11.89□□□□□ -0.51
PTPN20-227ENST00000513159 GRK4P32298 578 aa11.89□□□□□ -0.51
PTPN20-227ENST00000513159 ALDH5A1P51649 535 aaPredicted RBP11.89□□□□□ -0.51
PTPN20-227ENST00000513159 FOSBP53539 338 aa11.89□□□□□ -0.51
PTPN20-227ENST00000513159 AKAP17AQ02040 695 aaKnown RBP11.89□□□□□ -0.51
PTPN20-227ENST00000513159 TRAF1Q13077 416 aa11.89□□□□□ -0.51
PTPN20-227ENST00000513159 MTFR1Q15390 333 aa11.89□□□□□ -0.51
PTPN20-227ENST00000513159 FCHSD1Q86WN1 690 aa11.89□□□□□ -0.51
PTPN20-227ENST00000513159 SAMD3Q8N6K7 520 aa11.89□□□□□ -0.51
PTPN20-227ENST00000513159 OXER1Q8TDS5 423 aa11.89□□□□□ -0.51
PTPN20-227ENST00000513159 CRYGNQ8WXF5 182 aa11.89□□□□□ -0.51
PTPN20-227ENST00000513159 PGBD1Q96JS3 809 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms