RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 ARMT1Q9H993 441 aa15.73■□□□□ 0.11
TRIO-218ENST00000512070 TFCP2L1Q9NZI6 479 aa15.73■□□□□ 0.11
TRIO-218ENST00000512070 HGSO14964 777 aaPredicted RBP15.73■□□□□ 0.11
TRIO-218ENST00000512070 GCFC2P16383 781 aaKnown RBP15.73■□□□□ 0.11
TRIO-218ENST00000512070 ABCB4P21439 1286 aa15.73■□□□□ 0.11
TRIO-218ENST00000512070 ATP2B4P23634 1241 aa15.73■□□□□ 0.11
TRIO-218ENST00000512070 IGBP1P78318 339 aa15.73■□□□□ 0.11
TRIO-218ENST00000512070 CDC37Q16543 378 aaPredicted RBP15.73■□□□□ 0.11
TRIO-218ENST00000512070 DCAF15Q66K64 600 aa15.73■□□□□ 0.11
TRIO-218ENST00000512070 KRT80Q6KB66 452 aa15.73■□□□□ 0.11
TRIO-218ENST00000512070 ZNF654Q8IZM8 581 aa15.73■□□□□ 0.11
TRIO-218ENST00000512070 ZSCAN10Q96SZ4 725 aaPredicted RBP15.73■□□□□ 0.11
TRIO-218ENST00000512070 NLRC4Q9NPP4 1024 aa15.73■□□□□ 0.11
TRIO-218ENST00000512070 DAAM1Q9Y4D1 1078 aa15.73■□□□□ 0.11
TRIO-218ENST00000512070 SAMD9Q5K651 1589 aa15.73■□□□□ 0.11
TRIO-218ENST00000512070 MAN1A2O60476 641 aa15.73■□□□□ 0.11
TRIO-218ENST00000512070 PFKFB1P16118 471 aa15.73■□□□□ 0.11
TRIO-218ENST00000512070 PNOCQ13519 176 aa15.73■□□□□ 0.11
TRIO-218ENST00000512070 DHX38Q92620 1227 aaKnown RBP15.73■□□□□ 0.11
TRIO-218ENST00000512070 NBPF10Q6P3W6 841 aaKnown RBP15.72■□□□□ 0.11
TRIO-218ENST00000512070 PLCD3Q8N3E9 789 aa15.72■□□□□ 0.11
TRIO-218ENST00000512070 PSTPIP2Q9H939 334 aa15.72■□□□□ 0.11
TRIO-218ENST00000512070 PKD2L1Q9P0L9 805 aa15.72■□□□□ 0.11
TRIO-218ENST00000512070 BIN2Q9UBW5 565 aaPredicted RBP15.72■□□□□ 0.11
TRIO-218ENST00000512070 ATP8B3O60423 1300 aa15.72■□□□□ 0.11
TRIO-218ENST00000512070 RPN1P04843 607 aaKnown RBP15.72■□□□□ 0.11
TRIO-218ENST00000512070 DIS3Q9Y2L1 958 aaKnown RBP15.72■□□□□ 0.11
TRIO-218ENST00000512070 PYGBP11216 843 aa15.72■□□□□ 0.11
TRIO-218ENST00000512070 FOXP1Q9H334 677 aaPredicted RBP15.72■□□□□ 0.11
TRIO-218ENST00000512070 AATFQ9NY61 560 aaKnown RBP eCLIP15.72■□□□□ 0.11
TRIO-218ENST00000512070 DDX25Q9UHL0 483 aaKnown RBP15.72■□□□□ 0.11
TRIO-218ENST00000512070 A0A1W2PP64 1363 aa15.72■□□□□ 0.11
TRIO-218ENST00000512070 TMEM191BP0C7N4 346 aa15.72■□□□□ 0.11
TRIO-218ENST00000512070 TFDP1Q14186 410 aa15.72■□□□□ 0.11
TRIO-218ENST00000512070 TAF11Q15544 211 aa15.72■□□□□ 0.11
TRIO-218ENST00000512070 SLC12A6Q9UHW9 1150 aa15.72■□□□□ 0.11
TRIO-218ENST00000512070 ATP1A2P50993 1020 aa15.72■□□□□ 0.11
TRIO-218ENST00000512070 GIPC2Q8TF65 315 aa15.72■□□□□ 0.11
TRIO-218ENST00000512070 GFM2Q969S9 779 aaKnown RBP15.72■□□□□ 0.11
TRIO-218ENST00000512070 PFKFB2O60825 505 aa15.72■□□□□ 0.11
TRIO-218ENST00000512070 CHEK2O96017 543 aa15.72■□□□□ 0.11
TRIO-218ENST00000512070 ADCY2Q08462 1091 aa15.72■□□□□ 0.11
TRIO-218ENST00000512070 LRRC23Q53EV4 343 aaPredicted RBP15.72■□□□□ 0.11
TRIO-218ENST00000512070 FAM160B1Q5W0V3 765 aa15.72■□□□□ 0.11
TRIO-218ENST00000512070 GUCY2DQ02846 1103 aa15.71■□□□□ 0.11
TRIO-218ENST00000512070 TMTC4Q5T4D3 741 aa15.71■□□□□ 0.11
TRIO-218ENST00000512070 PPP4R3CPQ6ZMV5 832 aa15.71■□□□□ 0.11
TRIO-218ENST00000512070 SAP30BPQ9UHR5 308 aaKnown RBP15.71■□□□□ 0.11
TRIO-218ENST00000512070 CPP00450 1065 aa15.71■□□□□ 0.11
TRIO-218ENST00000512070 DYMQ7RTS9 669 aa15.71■□□□□ 0.11
TRIO-218ENST00000512070 GLG1Q92896 1179 aa15.71■□□□□ 0.11
TRIO-218ENST00000512070 PHKBQ93100 1093 aa15.71■□□□□ 0.11
TRIO-218ENST00000512070 MED10Q9BTT4 135 aa15.71■□□□□ 0.11
TRIO-218ENST00000512070 GOLGA4Q13439 2230 aaKnown RBP15.71■□□□□ 0.11
TRIO-218ENST00000512070 TMEM247A6NEH6 219 aa15.71■□□□□ 0.11
TRIO-218ENST00000512070 K7ENM7 598 aa15.71■□□□□ 0.11
TRIO-218ENST00000512070 IGSF3O75054 1194 aa15.71■□□□□ 0.11
TRIO-218ENST00000512070 ARHGEF16Q5VV41 709 aa15.71■□□□□ 0.11
TRIO-218ENST00000512070 PDCD7Q8N8D1 485 aaKnown RBP15.71■□□□□ 0.11
TRIO-218ENST00000512070 NCOA5Q9HCD5 579 aaKnown RBP15.71■□□□□ 0.11
TRIO-218ENST00000512070 MSH2P43246 934 aa15.71■□□□□ 0.11
TRIO-218ENST00000512070 RAPH1Q70E73 1250 aa15.71■□□□□ 0.11
TRIO-218ENST00000512070 POLR3CQ9BUI4 534 aaPredicted RBP15.71■□□□□ 0.11
TRIO-218ENST00000512070 SCHIP1Q9P0W5 487 aaPredicted RBP15.71■□□□□ 0.11
TRIO-218ENST00000512070 C6orf118Q5T5N4 469 aa15.71■□□□□ 0.11
TRIO-218ENST00000512070 EMBQ6PCB8 327 aa15.71■□□□□ 0.11
TRIO-218ENST00000512070 BANK1Q8NDB2 785 aa15.71■□□□□ 0.11
TRIO-218ENST00000512070 CACTINQ8WUQ7 758 aaKnown RBP15.71■□□□□ 0.11
TRIO-218ENST00000512070 SYF2O95926 243 aaKnown RBP15.71■□□□□ 0.11
TRIO-218ENST00000512070 PIK3CAP42336 1068 aa15.71■□□□□ 0.11
TRIO-218ENST00000512070 ARHGDIAP52565 204 aa15.71■□□□□ 0.11
TRIO-218ENST00000512070 GLE1Q53GS7 698 aaKnown RBP15.71■□□□□ 0.1
TRIO-218ENST00000512070 TEDDM1Q5T9Z0 273 aa15.71■□□□□ 0.1
TRIO-218ENST00000512070 POMGNT1Q8WZA1 660 aa15.71■□□□□ 0.1
TRIO-218ENST00000512070 WDR17Q8IZU2 1322 aa15.71■□□□□ 0.1
TRIO-218ENST00000512070 ZNF532Q9HCE3 1301 aa15.71■□□□□ 0.1
TRIO-218ENST00000512070 MAPK13O15264 365 aa15.7■□□□□ 0.1
TRIO-218ENST00000512070 PPP6R2O75170 966 aa15.7■□□□□ 0.1
TRIO-218ENST00000512070 GPATCH4Q5T3I0 446 aaKnown RBP15.7■□□□□ 0.1
TRIO-218ENST00000512070 TBC1D7Q9P0N9 293 aa15.7■□□□□ 0.1
TRIO-218ENST00000512070 SPDYE16A6NNV3 312 aaPredicted RBP15.7■□□□□ 0.1
TRIO-218ENST00000512070 EEF1DP29692 281 aaKnown RBP15.7■□□□□ 0.1
TRIO-218ENST00000512070 CYP2J2P51589 502 aa15.7■□□□□ 0.1
TRIO-218ENST00000512070 SPDYE2Q495Y8 402 aa15.7■□□□□ 0.1
TRIO-218ENST00000512070 CFBP00751 764 aa15.7■□□□□ 0.1
TRIO-218ENST00000512070 TEKT3Q9BXF9 490 aa15.7■□□□□ 0.1
TRIO-218ENST00000512070 DISP1Q96F81 1524 aa15.7■□□□□ 0.1
TRIO-218ENST00000512070 YWHAGP61981 247 aaKnown RBP eCLIP15.7■□□□□ 0.1
TRIO-218ENST00000512070 IFT88Q13099 833 aa15.7■□□□□ 0.1
TRIO-218ENST00000512070 PAWRQ96IZ0 340 aaKnown RBP15.7■□□□□ 0.1
TRIO-218ENST00000512070 CDHR1Q96JP9 859 aa15.7■□□□□ 0.1
TRIO-218ENST00000512070 FMO2Q99518 471 aa15.7■□□□□ 0.1
TRIO-218ENST00000512070 SGK1O00141 431 aa15.7■□□□□ 0.1
TRIO-218ENST00000512070 SCG2P13521 617 aa15.7■□□□□ 0.1
TRIO-218ENST00000512070 ADAM9Q13443 819 aa15.7■□□□□ 0.1
TRIO-218ENST00000512070 ART3Q13508 389 aa15.7■□□□□ 0.1
TRIO-218ENST00000512070 ATP6V0A1Q93050 837 aa15.7■□□□□ 0.1
TRIO-218ENST00000512070 PDE11AQ9HCR9 933 aa15.7■□□□□ 0.1
TRIO-218ENST00000512070 POLR3EQ9NVU0 708 aa15.7■□□□□ 0.1
TRIO-218ENST00000512070 POLR2MP0CAP2 368 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms