RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 MTMR8Q96EF0 704 aa9.2□□□□□ -0.94
SMAD1-209ENST00000511125 ZNF214Q9UL59 606 aaPredicted RBP9.2□□□□□ -0.94
SMAD1-209ENST00000511125 KCNH4Q9UQ05 1017 aa9.2□□□□□ -0.94
SMAD1-209ENST00000511125 GREB1LQ9C091 1923 aaPredicted RBP9.19□□□□□ -0.94
SMAD1-209ENST00000511125 A0A1B0GVL5 298 aa9.19□□□□□ -0.94
SMAD1-209ENST00000511125 VWA3AA6NCI4 1184 aa9.19□□□□□ -0.94
SMAD1-209ENST00000511125 GCOM1H8Y6P7 765 aaPredicted RBP9.19□□□□□ -0.94
SMAD1-209ENST00000511125 DDX39AO00148 427 aaKnown RBP9.19□□□□□ -0.94
SMAD1-209ENST00000511125 POLR2MP0CAP2 368 aa9.19□□□□□ -0.94
SMAD1-209ENST00000511125 OSBPP22059 807 aa9.19□□□□□ -0.94
SMAD1-209ENST00000511125 PTGDRQ13258 359 aa9.19□□□□□ -0.94
SMAD1-209ENST00000511125 NONOQ15233 471 aaKnown RBP eCLIP9.19□□□□□ -0.94
SMAD1-209ENST00000511125 DEFB115Q30KQ5 88 aa9.19□□□□□ -0.94
SMAD1-209ENST00000511125 ZNF396Q96N95 335 aaPredicted RBP9.19□□□□□ -0.94
SMAD1-209ENST00000511125 TMEM60Q9H2L4 133 aa9.19□□□□□ -0.94
SMAD1-209ENST00000511125 FOXP1Q9H334 677 aaPredicted RBP9.19□□□□□ -0.94
SMAD1-209ENST00000511125 RIC8AQ9NPQ8 531 aa9.19□□□□□ -0.94
SMAD1-209ENST00000511125 DOCK1Q14185 1865 aa9.19□□□□□ -0.94
SMAD1-209ENST00000511125 PTGS1P23219 599 aa9.19□□□□□ -0.94
SMAD1-209ENST00000511125 PRR16Q569H4 304 aa9.19□□□□□ -0.94
SMAD1-209ENST00000511125 SH3D19Q5HYK7 790 aa9.19□□□□□ -0.94
SMAD1-209ENST00000511125 USP49Q70CQ1 688 aa9.19□□□□□ -0.94
SMAD1-209ENST00000511125 IL31RAQ8NI17 732 aa9.19□□□□□ -0.94
SMAD1-209ENST00000511125 MOV10L1Q9BXT6 1211 aaKnown RBP9.19□□□□□ -0.94
SMAD1-209ENST00000511125 ANO3Q9BYT9 981 aa9.19□□□□□ -0.94
SMAD1-209ENST00000511125 GINM1Q9NU53 330 aa9.19□□□□□ -0.94
SMAD1-209ENST00000511125 LMBRD1Q9NUN5 540 aa9.19□□□□□ -0.94
SMAD1-209ENST00000511125 MRPL11Q9Y3B7 192 aaKnown RBP9.19□□□□□ -0.94
SMAD1-209ENST00000511125 OTOFQ9HC10 1997 aa9.19□□□□□ -0.94
SMAD1-209ENST00000511125 PP2D1A8MPX8 630 aa9.18□□□□□ -0.94
SMAD1-209ENST00000511125 TBC1D8O95759 1140 aa9.18□□□□□ -0.94
SMAD1-209ENST00000511125 TXKP42681 527 aa9.18□□□□□ -0.94
SMAD1-209ENST00000511125 CAVIN1Q6NZI2 390 aaKnown RBP9.18□□□□□ -0.94
SMAD1-209ENST00000511125 RNF207Q6ZRF8 634 aa9.18□□□□□ -0.94
SMAD1-209ENST00000511125 POTEDQ86YR6 584 aa9.18□□□□□ -0.94
SMAD1-209ENST00000511125 TEX13BQ9BXU2 312 aa9.18□□□□□ -0.94
SMAD1-209ENST00000511125 SPATC1LQ9H0A9 340 aa9.18□□□□□ -0.94
SMAD1-209ENST00000511125 PCDHA7Q9UN72 937 aa9.18□□□□□ -0.94
SMAD1-209ENST00000511125 ABCB11O95342 1321 aa9.18□□□□□ -0.94
SMAD1-209ENST00000511125 DNAH12Q6ZR08 3092 aa9.18□□□□□ -0.94
SMAD1-209ENST00000511125 SPTLC2O15270 562 aa9.18□□□□□ -0.94
SMAD1-209ENST00000511125 SLC37A4O43826 429 aa9.18□□□□□ -0.94
SMAD1-209ENST00000511125 TRPA1O75762 1119 aa9.18□□□□□ -0.94
SMAD1-209ENST00000511125 SMARCA1P28370 1054 aa9.18□□□□□ -0.94
SMAD1-209ENST00000511125 FKBP1BP68106 108 aa9.18□□□□□ -0.94
SMAD1-209ENST00000511125 BRAPQ7Z569 592 aa9.18□□□□□ -0.94
SMAD1-209ENST00000511125 PROCA1Q8NCQ7 364 aaPredicted RBP9.18□□□□□ -0.94
SMAD1-209ENST00000511125 CLEC4DQ8WXI8 215 aa9.18□□□□□ -0.94
SMAD1-209ENST00000511125 TNFRSF25Q93038 417 aa9.18□□□□□ -0.94
SMAD1-209ENST00000511125 CAPNS2Q96L46 248 aa9.18□□□□□ -0.94
SMAD1-209ENST00000511125 C12orf42Q96LP6 360 aa9.18□□□□□ -0.94
SMAD1-209ENST00000511125 CFAP45Q9UL16 551 aa9.18□□□□□ -0.94
SMAD1-209ENST00000511125 NOL7Q9UMY1 257 aaKnown RBP9.18□□□□□ -0.94
SMAD1-209ENST00000511125 TLL2Q9Y6L7 1015 aa9.18□□□□□ -0.94
SMAD1-209ENST00000511125 CHMP2AO43633 222 aa9.18□□□□□ -0.94
SMAD1-209ENST00000511125 TRAK2O60296 914 aa9.18□□□□□ -0.94
SMAD1-209ENST00000511125 LIG1P18858 919 aa9.18□□□□□ -0.94
SMAD1-209ENST00000511125 GPT2Q8TD30 523 aa9.18□□□□□ -0.94
SMAD1-209ENST00000511125 TESPA1A2RU30 521 aaPredicted RBP9.17□□□□□ -0.94
SMAD1-209ENST00000511125 MYCP01106 439 aaPredicted RBP9.17□□□□□ -0.94
SMAD1-209ENST00000511125 TECP42680 631 aa9.17□□□□□ -0.94
SMAD1-209ENST00000511125 DHX8Q14562 1220 aaKnown RBP9.17□□□□□ -0.94
SMAD1-209ENST00000511125 LBX2Q6XYB7 198 aa9.17□□□□□ -0.94
SMAD1-209ENST00000511125 LINC00301Q8NCQ3 95 aa9.17□□□□□ -0.94
SMAD1-209ENST00000511125 STAMQ92783 540 aa9.17□□□□□ -0.94
SMAD1-209ENST00000511125 RMDN3Q96TC7 470 aa9.17□□□□□ -0.94
SMAD1-209ENST00000511125 A1CFQ9NQ94 594 aaKnown RBP9.17□□□□□ -0.94
SMAD1-209ENST00000511125 SH3GLB2Q9NR46 395 aa9.17□□□□□ -0.94
SMAD1-209ENST00000511125 ARHGEF16Q5VV41 709 aa9.17□□□□□ -0.94
SMAD1-209ENST00000511125 NEK8Q86SG6 692 aa9.17□□□□□ -0.94
SMAD1-209ENST00000511125 REPS2Q8NFH8 660 aa9.17□□□□□ -0.94
SMAD1-209ENST00000511125 RASSF8Q8NHQ8 419 aa9.17□□□□□ -0.94
SMAD1-209ENST00000511125 CNMDO75829 334 aa9.16□□□□□ -0.94
SMAD1-209ENST00000511125 ERVK-9P63128 1117 aa9.16□□□□□ -0.94
SMAD1-209ENST00000511125 ERVK-24P63145 666 aa9.16□□□□□ -0.94
SMAD1-209ENST00000511125 ARHGAP4P98171 946 aa9.16□□□□□ -0.94
SMAD1-209ENST00000511125 RILPL1Q5EBL4 403 aa9.16□□□□□ -0.94
SMAD1-209ENST00000511125 SYTL5Q8TDW5 730 aaPredicted RBP9.16□□□□□ -0.94
SMAD1-209ENST00000511125 EPSTI1Q96J88 318 aa9.16□□□□□ -0.94
SMAD1-209ENST00000511125 BCAS3Q9H6U6 928 aa9.16□□□□□ -0.94
SMAD1-209ENST00000511125 FAM155AB1AL88 458 aaPredicted RBP9.16□□□□□ -0.94
SMAD1-209ENST00000511125 FAM86B1E9PN63 330 aa9.16□□□□□ -0.94
SMAD1-209ENST00000511125 M0R2N6 131 aa9.16□□□□□ -0.94
SMAD1-209ENST00000511125 EDIL3O43854 480 aa9.16□□□□□ -0.94
SMAD1-209ENST00000511125 FAM86B2P0C5J1 330 aa9.16□□□□□ -0.94
SMAD1-209ENST00000511125 HOXA7P31268 230 aaPredicted RBP9.16□□□□□ -0.94
SMAD1-209ENST00000511125 CRHR2Q13324 411 aa9.16□□□□□ -0.94
SMAD1-209ENST00000511125 ISM2Q6H9L7 571 aa9.16□□□□□ -0.94
SMAD1-209ENST00000511125 KRT25Q7Z3Z0 450 aa9.16□□□□□ -0.94
SMAD1-209ENST00000511125 SLC10A3P09131 477 aa9.16□□□□□ -0.94
SMAD1-209ENST00000511125 VEGFBP49765 207 aa9.16□□□□□ -0.94
SMAD1-209ENST00000511125 APLP1P51693 650 aa9.16□□□□□ -0.94
SMAD1-209ENST00000511125 PABPC4Q13310 644 aaKnown RBP eCLIP9.16□□□□□ -0.94
SMAD1-209ENST00000511125 IFNL1Q8IU54 200 aa9.16□□□□□ -0.94
SMAD1-209ENST00000511125 FSIP1Q8NA03 581 aa9.16□□□□□ -0.94
SMAD1-209ENST00000511125 SCAND2PQ9GZW5 306 aaPredicted RBP9.16□□□□□ -0.94
SMAD1-209ENST00000511125 CSRNP2Q9H175 543 aa9.16□□□□□ -0.94
SMAD1-209ENST00000511125 GOLPH3LQ9H4A5 285 aa9.16□□□□□ -0.94
SMAD1-209ENST00000511125 ACAD9Q9H845 621 aa9.16□□□□□ -0.94
SMAD1-209ENST00000511125 DDX25Q9UHL0 483 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms