RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 GUCA1BQ9UMX6 200 aa20.05■□□□□ 0.8
CCHCR1-228ENST00000509552 THSD7AQ9UPZ6 1657 aa20.05■□□□□ 0.8
CCHCR1-228ENST00000509552 SASH3O75995 380 aa20.05■□□□□ 0.8
CCHCR1-228ENST00000509552 PDHBP11177 359 aa20.05■□□□□ 0.8
CCHCR1-228ENST00000509552 CALCRLQ16602 461 aa20.05■□□□□ 0.8
CCHCR1-228ENST00000509552 ASPRV1Q53RT3 343 aa20.05■□□□□ 0.8
CCHCR1-228ENST00000509552 COBLL1Q53SF7 1204 aa20.05■□□□□ 0.8
CCHCR1-228ENST00000509552 PCMTD1Q96MG8 357 aaPredicted RBP20.05■□□□□ 0.8
CCHCR1-228ENST00000509552 MMTAG2Q9BU76 263 aaKnown RBP20.05■□□□□ 0.8
CCHCR1-228ENST00000509552 LRWD1Q9UFC0 647 aa20.05■□□□□ 0.8
CCHCR1-228ENST00000509552 MYO6Q9UM54 1294 aa20.05■□□□□ 0.8
CCHCR1-228ENST00000509552 C6orf229H3BNL8 230 aa20.04■□□□□ 0.8
CCHCR1-228ENST00000509552 CYLC1P35663 651 aaPredicted RBP20.04■□□□□ 0.8
CCHCR1-228ENST00000509552 ADCY7P51828 1080 aa20.04■□□□□ 0.8
CCHCR1-228ENST00000509552 CDK5RAP3Q96JB5 506 aa20.04■□□□□ 0.8
CCHCR1-228ENST00000509552 NOC4LQ9BVI4 516 aaKnown RBP20.04■□□□□ 0.8
CCHCR1-228ENST00000509552 RAB34Q9BZG1 259 aa20.04■□□□□ 0.8
CCHCR1-228ENST00000509552 ANKZF1Q9H8Y5 726 aa20.04■□□□□ 0.8
CCHCR1-228ENST00000509552 TMEM260Q9NX78 707 aa20.04■□□□□ 0.8
CCHCR1-228ENST00000509552 MTMR4Q9NYA4 1195 aa20.04■□□□□ 0.8
CCHCR1-228ENST00000509552 POLLQ9UGP5 575 aa20.04■□□□□ 0.8
CCHCR1-228ENST00000509552 REXO2Q9Y3B8 237 aaKnown RBP20.04■□□□□ 0.8
CCHCR1-228ENST00000509552 FRMPD2Q68DX3 1309 aaPredicted RBP20.04■□□□□ 0.8
CCHCR1-228ENST00000509552 ERLIN1O75477 346 aa20.04■□□□□ 0.8
CCHCR1-228ENST00000509552 IPO7O95373 1038 aaKnown RBP20.04■□□□□ 0.8
CCHCR1-228ENST00000509552 FCER1AP12319 257 aa20.04■□□□□ 0.8
CCHCR1-228ENST00000509552 MEA1Q16626 185 aa20.04■□□□□ 0.8
CCHCR1-228ENST00000509552 LONRF2Q1L5Z9 754 aa20.04■□□□□ 0.8
CCHCR1-228ENST00000509552 WDR59Q6PJI9 974 aa20.04■□□□□ 0.8
CCHCR1-228ENST00000509552 MSANTD4Q8NCY6 345 aa20.04■□□□□ 0.8
CCHCR1-228ENST00000509552 HNRNPLLQ8WVV9 542 aaKnown RBP20.04■□□□□ 0.8
CCHCR1-228ENST00000509552 STK17AQ9UEE5 414 aa20.04■□□□□ 0.8
CCHCR1-228ENST00000509552 PLIN4Q96Q06 1357 aa20.04■□□□□ 0.8
CCHCR1-228ENST00000509552 GYS1P13807 737 aa20.03■□□□□ 0.8
CCHCR1-228ENST00000509552 ZBED6P86452 979 aa20.03■□□□□ 0.8
CCHCR1-228ENST00000509552 FKBP15Q5T1M5 1219 aa20.03■□□□□ 0.8
CCHCR1-228ENST00000509552 MTMR9Q96QG7 549 aa20.03■□□□□ 0.8
CCHCR1-228ENST00000509552 FUT8Q9BYC5 575 aa20.03■□□□□ 0.8
CCHCR1-228ENST00000509552 FXR2P51116 673 aaKnown RBP eCLIP20.03■□□□□ 0.86e-7■□□□□ 9.4
CCHCR1-228ENST00000509552 PICALMQ13492 652 aa20.03■□□□□ 0.8
CCHCR1-228ENST00000509552 SMC1AQ14683 1233 aaKnown RBP20.03■□□□□ 0.8
CCHCR1-228ENST00000509552 EHBP1Q8NDI1 1231 aa20.03■□□□□ 0.8
CCHCR1-228ENST00000509552 UBXN6Q9BZV1 441 aa20.03■□□□□ 0.8
CCHCR1-228ENST00000509552 RAB21Q9UL25 225 aa20.03■□□□□ 0.8
CCHCR1-228ENST00000509552 DAGLAQ9Y4D2 1042 aa20.03■□□□□ 0.8
CCHCR1-228ENST00000509552 PSMD14O00487 310 aa20.02■□□□□ 0.8
CCHCR1-228ENST00000509552 CCDC122Q5T0U0 273 aa20.02■□□□□ 0.8
CCHCR1-228ENST00000509552 KIAA1328Q86T90 577 aa20.02■□□□□ 0.8
CCHCR1-228ENST00000509552 CCDC170Q8IYT3 715 aa20.02■□□□□ 0.8
CCHCR1-228ENST00000509552 IQCDQ96DY2 449 aa20.02■□□□□ 0.8
CCHCR1-228ENST00000509552 EEF2KMTQ96G04 330 aa20.02■□□□□ 0.8
CCHCR1-228ENST00000509552 TTYH3Q9C0H2 523 aa20.02■□□□□ 0.8
CCHCR1-228ENST00000509552 LRRC4BQ9NT99 713 aa20.02■□□□□ 0.8
CCHCR1-228ENST00000509552 KRT86O43790 486 aa20.02■□□□□ 0.79
CCHCR1-228ENST00000509552 TUBBP07437 444 aa20.02■□□□□ 0.79
CCHCR1-228ENST00000509552 GTF2IP78347 998 aa20.02■□□□□ 0.79
CCHCR1-228ENST00000509552 GRB10Q13322 594 aa20.02■□□□□ 0.79
CCHCR1-228ENST00000509552 ZNF662Q6ZS27 426 aa20.02■□□□□ 0.79
CCHCR1-228ENST00000509552 COA7Q96BR5 231 aa20.02■□□□□ 0.79
CCHCR1-228ENST00000509552 AGPAT5Q9NUQ2 364 aa20.02■□□□□ 0.79
CCHCR1-228ENST00000509552 PVALEFA0A1B0GWK0 134 aa20.01■□□□□ 0.79
CCHCR1-228ENST00000509552 POLR3GO15318 223 aaPredicted RBP20.01■□□□□ 0.79
CCHCR1-228ENST00000509552 HOXA10P31260 410 aaPredicted RBP20.01■□□□□ 0.79
CCHCR1-228ENST00000509552 HERVK_113P62684 666 aa20.01■□□□□ 0.79
CCHCR1-228ENST00000509552 AMPD2Q01433 879 aa20.01■□□□□ 0.79
CCHCR1-228ENST00000509552 UNC13DQ70J99 1090 aa20.01■□□□□ 0.79
CCHCR1-228ENST00000509552 ZSCAN29Q8IWY8 852 aaPredicted RBP20.01■□□□□ 0.79
CCHCR1-228ENST00000509552 LRRC47Q8N1G4 583 aaKnown RBP20.01■□□□□ 0.79
CCHCR1-228ENST00000509552 KIAA0895Q8NCT3 520 aa20.01■□□□□ 0.79
CCHCR1-228ENST00000509552 LARP4BQ92615 738 aaKnown RBP20.01■□□□□ 0.79
CCHCR1-228ENST00000509552 CRAMP1Q96RY5 1269 aa20.01■□□□□ 0.79
CCHCR1-228ENST00000509552 SLC39A2Q9NP94 309 aa20.01■□□□□ 0.79
CCHCR1-228ENST00000509552 TRIM10Q9UDY6 481 aa20.01■□□□□ 0.79
CCHCR1-228ENST00000509552 FGFR1OPO95684 399 aaKnown RBP20.01■□□□□ 0.79
CCHCR1-228ENST00000509552 PDIA5Q14554 519 aa20.01■□□□□ 0.79
CCHCR1-228ENST00000509552 FIGNQ5HY92 759 aa20.01■□□□□ 0.79
CCHCR1-228ENST00000509552 CENPPQ6IPU0 288 aa20.01■□□□□ 0.79
CCHCR1-228ENST00000509552 ERGIC2Q96RQ1 377 aa20.01■□□□□ 0.79
CCHCR1-228ENST00000509552 LRRC27Q9C0I9 530 aa20.01■□□□□ 0.79
CCHCR1-228ENST00000509552 A0A1W2PQJ5 194 aa20■□□□□ 0.79
CCHCR1-228ENST00000509552 OAS2P29728 719 aaKnown RBP20■□□□□ 0.79
CCHCR1-228ENST00000509552 MCM6Q14566 821 aa20■□□□□ 0.79
CCHCR1-228ENST00000509552 KRT79Q5XKE5 535 aa20■□□□□ 0.79
CCHCR1-228ENST00000509552 PPP1R18Q6NYC8 613 aa20■□□□□ 0.79
CCHCR1-228ENST00000509552 DPP8Q6V1X1 898 aaPredicted RBP20■□□□□ 0.79
CCHCR1-228ENST00000509552 JAKMIP2Q96AA8 810 aa20■□□□□ 0.79
CCHCR1-228ENST00000509552 GBP3Q9H0R5 595 aa20■□□□□ 0.79
CCHCR1-228ENST00000509552 NHEJ1Q9H9Q4 299 aaPredicted RBP20■□□□□ 0.79
CCHCR1-228ENST00000509552 EIF3CLB5ME19 914 aaKnown RBP19.99■□□□□ 0.79
CCHCR1-228ENST00000509552 TTLL1O95922 423 aa19.99■□□□□ 0.79
CCHCR1-228ENST00000509552 RHOXF2BP0C7M4 288 aa19.99■□□□□ 0.79
CCHCR1-228ENST00000509552 SNHG28P0DPA3 235 aa19.99■□□□□ 0.79
CCHCR1-228ENST00000509552 AKR1B1P15121 316 aa19.99■□□□□ 0.79
CCHCR1-228ENST00000509552 HOXA7P31268 230 aaPredicted RBP19.99■□□□□ 0.79
CCHCR1-228ENST00000509552 GABPAQ06546 454 aa19.99■□□□□ 0.79
CCHCR1-228ENST00000509552 MIIPQ5JXC2 388 aa19.99■□□□□ 0.79
CCHCR1-228ENST00000509552 TMC4Q7Z404 712 aa19.99■□□□□ 0.79
CCHCR1-228ENST00000509552 PNKPQ96T60 521 aa19.99■□□□□ 0.79
CCHCR1-228ENST00000509552 EIF3CQ99613 913 aaKnown RBP19.99■□□□□ 0.79
CCHCR1-228ENST00000509552 RHOXF2Q9BQY4 288 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms