RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 NSMFQ6X4W1 530 aa11.94□□□□□ -0.5
PTPN20-220ENST00000508715 HEATR3Q7Z4Q2 680 aa11.94□□□□□ -0.5
PTPN20-220ENST00000508715 RGS22Q8NE09 1264 aa11.94□□□□□ -0.5
PTPN20-220ENST00000508715 SYTL5Q8TDW5 730 aaPredicted RBP11.94□□□□□ -0.5
PTPN20-220ENST00000508715 TRIB2Q92519 343 aa11.94□□□□□ -0.5
PTPN20-220ENST00000508715 NUDT12Q9BQG2 462 aa11.94□□□□□ -0.5
PTPN20-220ENST00000508715 BARHL2Q9NY43 387 aa11.94□□□□□ -0.5
PTPN20-220ENST00000508715 SEC63Q9UGP8 760 aaKnown RBP11.94□□□□□ -0.5
PTPN20-220ENST00000508715 MRPL11Q9Y3B7 192 aaKnown RBP11.94□□□□□ -0.5
PTPN20-220ENST00000508715 DOCK5Q9H7D0 1870 aa11.93□□□□□ -0.5
PTPN20-220ENST00000508715 FRMPD3Q5JV73 1810 aa11.93□□□□□ -0.5
PTPN20-220ENST00000508715 CPLX1O14810 134 aa11.93□□□□□ -0.5
PTPN20-220ENST00000508715 XRCC5P13010 732 aaKnown RBP11.93□□□□□ -0.5
PTPN20-220ENST00000508715 ELNP15502 786 aa11.93□□□□□ -0.5
PTPN20-220ENST00000508715 HOXA13P31271 388 aaPredicted RBP11.93□□□□□ -0.5
PTPN20-220ENST00000508715 KCTD2Q14681 263 aa11.93□□□□□ -0.5
PTPN20-220ENST00000508715 USP17L6PQ6QN14 398 aa11.93□□□□□ -0.5
PTPN20-220ENST00000508715 CCAR1Q8IX12 1150 aaKnown RBP11.93□□□□□ -0.5
PTPN20-220ENST00000508715 ANKRD35Q8N283 1001 aa11.93□□□□□ -0.5
PTPN20-220ENST00000508715 SOCS4Q8WXH5 440 aa11.93□□□□□ -0.5
PTPN20-220ENST00000508715 DDX11Q96FC9 970 aa11.93□□□□□ -0.5
PTPN20-220ENST00000508715 MAML3Q96JK9 1138 aa11.93□□□□□ -0.5
PTPN20-220ENST00000508715 TAAR1Q96RJ0 339 aa11.93□□□□□ -0.5
PTPN20-220ENST00000508715 VPS54Q9P1Q0 977 aa11.93□□□□□ -0.5
PTPN20-220ENST00000508715 ORC3Q9UBD5 711 aaPredicted RBP11.93□□□□□ -0.5
PTPN20-220ENST00000508715 PNMA2Q9UL42 364 aa11.93□□□□□ -0.5
PTPN20-220ENST00000508715 IVNS1ABPQ9Y6Y0 642 aa11.93□□□□□ -0.5
PTPN20-220ENST00000508715 EDIL3O43854 480 aa11.92□□□□□ -0.5
PTPN20-220ENST00000508715 ADCY3O60266 1144 aa11.92□□□□□ -0.5
PTPN20-220ENST00000508715 DEXIO95424 95 aa11.92□□□□□ -0.5
PTPN20-220ENST00000508715 CFBP00751 764 aa11.92□□□□□ -0.5
PTPN20-220ENST00000508715 RGS2P41220 211 aa11.92□□□□□ -0.5
PTPN20-220ENST00000508715 MCM2P49736 904 aa11.92□□□□□ -0.5
PTPN20-220ENST00000508715 UBE2SQ16763 222 aa11.92□□□□□ -0.5
PTPN20-220ENST00000508715 RNF207Q6ZRF8 634 aa11.92□□□□□ -0.5
PTPN20-220ENST00000508715 APBA2Q99767 749 aa11.92□□□□□ -0.5
PTPN20-220ENST00000508715 LLPHQ9BRT6 129 aaKnown RBP11.92□□□□□ -0.5
PTPN20-220ENST00000508715 MCOLN1Q9GZU1 580 aa11.92□□□□□ -0.5
PTPN20-220ENST00000508715 ZMYND12Q9H0C1 365 aa11.92□□□□□ -0.5
PTPN20-220ENST00000508715 PFASO15067 1338 aa11.91□□□□□ -0.5
PTPN20-220ENST00000508715 ESYT2A0FGR8 921 aa11.91□□□□□ -0.5
PTPN20-220ENST00000508715 SMCO2A6NFE2 343 aa11.91□□□□□ -0.5
PTPN20-220ENST00000508715 POTEB2H3BUK9 544 aa11.91□□□□□ -0.5
PTPN20-220ENST00000508715 hCG_1984214I3L0E3 225 aa11.91□□□□□ -0.5
PTPN20-220ENST00000508715 K7ELQ4 463 aaPredicted RBP11.91□□□□□ -0.5
PTPN20-220ENST00000508715 M0R2N6 131 aa11.91□□□□□ -0.5
PTPN20-220ENST00000508715 PIK3CDO00329 1044 aa11.91□□□□□ -0.5
PTPN20-220ENST00000508715 SNAI1O95863 264 aaPredicted RBP11.91□□□□□ -0.5
PTPN20-220ENST00000508715 CALML3P27482 149 aa11.91□□□□□ -0.5
PTPN20-220ENST00000508715 HOXD10P28358 340 aa11.91□□□□□ -0.5
PTPN20-220ENST00000508715 CLK2P49760 499 aaKnown RBP11.91□□□□□ -0.5
PTPN20-220ENST00000508715 NAPAP54920 295 aa11.91□□□□□ -0.5
PTPN20-220ENST00000508715 PRMT2P55345 433 aa11.91□□□□□ -0.5
PTPN20-220ENST00000508715 FBXO46Q6PJ61 603 aaPredicted RBP11.91□□□□□ -0.5
PTPN20-220ENST00000508715 DPP9Q86TI2 863 aa11.91□□□□□ -0.5
PTPN20-220ENST00000508715 ZNF713Q8N859 430 aaPredicted RBP11.91□□□□□ -0.5
PTPN20-220ENST00000508715 TRPV1Q8NER1 839 aa11.91□□□□□ -0.5
PTPN20-220ENST00000508715 IL31RAQ8NI17 732 aa11.91□□□□□ -0.5
PTPN20-220ENST00000508715 SH3TC2Q8TF17 1288 aa11.91□□□□□ -0.5
PTPN20-220ENST00000508715 MAF1Q9H063 256 aa11.91□□□□□ -0.5
PTPN20-220ENST00000508715 KATNBL1Q9H079 304 aa11.91□□□□□ -0.5
PTPN20-220ENST00000508715 RIC8AQ9NPQ8 531 aa11.91□□□□□ -0.5
PTPN20-220ENST00000508715 RBM27Q9P2N5 1060 aaKnown RBP11.91□□□□□ -0.5
PTPN20-220ENST00000508715 KCNJ14Q9UNX9 436 aa11.91□□□□□ -0.5
PTPN20-220ENST00000508715 DIS3Q9Y2L1 958 aaKnown RBP11.91□□□□□ -0.5
PTPN20-220ENST00000508715 BRCA2P51587 3418 aa11.91□□□□□ -0.5
PTPN20-220ENST00000508715 CDKL5O76039 1030 aa11.9□□□□□ -0.5
PTPN20-220ENST00000508715 EDNRBP24530 442 aa11.9□□□□□ -0.5
PTPN20-220ENST00000508715 CYP2C19P33261 490 aa11.9□□□□□ -0.5
PTPN20-220ENST00000508715 ARHGEF6Q15052 776 aa11.9□□□□□ -0.5
PTPN20-220ENST00000508715 PRAMEF19Q5SWL8 479 aa11.9□□□□□ -0.5
PTPN20-220ENST00000508715 MAP3K21Q5TCX8 1036 aa11.9□□□□□ -0.5
PTPN20-220ENST00000508715 OLFML2BQ68BL8 750 aa11.9□□□□□ -0.5
PTPN20-220ENST00000508715 PPP1R18Q6NYC8 613 aa11.9□□□□□ -0.5
PTPN20-220ENST00000508715 CPLX2Q6PUV4 134 aaKnown RBP11.9□□□□□ -0.5
PTPN20-220ENST00000508715 MAMDC4Q6UXC1 1216 aa11.9□□□□□ -0.5
PTPN20-220ENST00000508715 ZNF467Q7Z7K2 595 aaPredicted RBP11.9□□□□□ -0.5
PTPN20-220ENST00000508715 MCF2L2Q86YR7 1114 aa11.9□□□□□ -0.5
PTPN20-220ENST00000508715 TRIM22Q8IYM9 498 aa11.9□□□□□ -0.5
PTPN20-220ENST00000508715 RAET1EQ8TD07 263 aa11.9□□□□□ -0.5
PTPN20-220ENST00000508715 RASGRP4Q8TDF6 673 aa11.9□□□□□ -0.5
PTPN20-220ENST00000508715 MORC4Q8TE76 937 aa11.9□□□□□ -0.5
PTPN20-220ENST00000508715 PXYLP1Q8TE99 480 aa11.9□□□□□ -0.5
PTPN20-220ENST00000508715 ALG1Q9BT22 464 aa11.9□□□□□ -0.5
PTPN20-220ENST00000508715 PHF20Q9BVI0 1012 aa11.9□□□□□ -0.5
PTPN20-220ENST00000508715 PSTPIP2Q9H939 334 aa11.9□□□□□ -0.5
PTPN20-220ENST00000508715 CWC22Q9HCG8 908 aaKnown RBP11.9□□□□□ -0.5
PTPN20-220ENST00000508715 TMEM260Q9NX78 707 aa11.9□□□□□ -0.5
PTPN20-220ENST00000508715 FRMPD4Q14CM0 1322 aa11.89□□□□□ -0.51
PTPN20-220ENST00000508715 RPTORQ8N122 1335 aa11.89□□□□□ -0.51
PTPN20-220ENST00000508715 GCOM1H8Y6P7 765 aaPredicted RBP11.89□□□□□ -0.51
PTPN20-220ENST00000508715 POLR2MP0CAP2 368 aa11.89□□□□□ -0.51
PTPN20-220ENST00000508715 GRK4P32298 578 aa11.89□□□□□ -0.51
PTPN20-220ENST00000508715 ALDH5A1P51649 535 aaPredicted RBP11.89□□□□□ -0.51
PTPN20-220ENST00000508715 FOSBP53539 338 aa11.89□□□□□ -0.51
PTPN20-220ENST00000508715 AKAP17AQ02040 695 aaKnown RBP11.89□□□□□ -0.51
PTPN20-220ENST00000508715 TRAF1Q13077 416 aa11.89□□□□□ -0.51
PTPN20-220ENST00000508715 MTFR1Q15390 333 aa11.89□□□□□ -0.51
PTPN20-220ENST00000508715 FCHSD1Q86WN1 690 aa11.89□□□□□ -0.51
PTPN20-220ENST00000508715 SAMD3Q8N6K7 520 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms