RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 DIAPH3Q9NSV4 1193 aa13.56□□□□□ -0.24
HMGCS1-204ENST00000507293 Q9Y3F1 56 aa13.56□□□□□ -0.24
HMGCS1-204ENST00000507293 TMEM265A0A087WTH1 108 aa13.55□□□□□ -0.24
HMGCS1-204ENST00000507293 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.55□□□□□ -0.24
HMGCS1-204ENST00000507293 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.55□□□□□ -0.24
HMGCS1-204ENST00000507293 ZNF213O14771 459 aa13.55□□□□□ -0.24
HMGCS1-204ENST00000507293 GOLGA8HP0CJ92 632 aa13.55□□□□□ -0.24
HMGCS1-204ENST00000507293 ACRP10323 421 aa13.55□□□□□ -0.24
HMGCS1-204ENST00000507293 DNAJB2P25686 324 aa13.55□□□□□ -0.24
HMGCS1-204ENST00000507293 CYP2C18P33260 490 aa13.55□□□□□ -0.24
HMGCS1-204ENST00000507293 PSMC6P62333 389 aa13.55□□□□□ -0.24
HMGCS1-204ENST00000507293 TMEM240Q5SV17 173 aa13.55□□□□□ -0.24
HMGCS1-204ENST00000507293 RNF207Q6ZRF8 634 aa13.55□□□□□ -0.24
HMGCS1-204ENST00000507293 C16orf59Q7L2K0 433 aa13.55□□□□□ -0.24
HMGCS1-204ENST00000507293 MAFAQ8NHW3 353 aaPredicted RBP13.55□□□□□ -0.24
HMGCS1-204ENST00000507293 PNMA2Q9UL42 364 aa13.55□□□□□ -0.24
HMGCS1-204ENST00000507293 GRIN2DO15399 1336 aa13.55□□□□□ -0.24
HMGCS1-204ENST00000507293 WDR19Q8NEZ3 1342 aa13.55□□□□□ -0.24
HMGCS1-204ENST00000507293 KIAA1217Q5T5P2 1943 aa13.54□□□□□ -0.24
HMGCS1-204ENST00000507293 LOC102724159A0A0B4J2E5 919 aa13.54□□□□□ -0.24
HMGCS1-204ENST00000507293 KDM4AO75164 1064 aa13.54□□□□□ -0.24
HMGCS1-204ENST00000507293 FOSL2P15408 326 aa13.54□□□□□ -0.24
HMGCS1-204ENST00000507293 PWP2Q15269 919 aaKnown RBP13.54□□□□□ -0.24
HMGCS1-204ENST00000507293 DUSP28Q4G0W2 176 aa13.54□□□□□ -0.24
HMGCS1-204ENST00000507293 ZNF365Q70YC5 407 aa13.54□□□□□ -0.24
HMGCS1-204ENST00000507293 DGKHQ86XP1 1220 aa13.54□□□□□ -0.24
HMGCS1-204ENST00000507293 WDR11Q9BZH6 1224 aa13.54□□□□□ -0.24
HMGCS1-204ENST00000507293 UBA5Q9GZZ9 404 aa13.54□□□□□ -0.24
HMGCS1-204ENST00000507293 CPVLQ9H3G5 476 aa13.54□□□□□ -0.24
HMGCS1-204ENST00000507293 HIPK3Q9H422 1215 aa13.54□□□□□ -0.24
HMGCS1-204ENST00000507293 UMODL1Q5DID0 1318 aa13.54□□□□□ -0.24
HMGCS1-204ENST00000507293 TANC1Q9C0D5 1861 aa13.54□□□□□ -0.24
HMGCS1-204ENST00000507293 SCN10AQ9Y5Y9 1956 aa13.54□□□□□ -0.24
HMGCS1-204ENST00000507293 SCN5AQ14524 2016 aa13.53□□□□□ -0.24
HMGCS1-204ENST00000507293 RBM47A0AV96 593 aaKnown RBP13.53□□□□□ -0.24
HMGCS1-204ENST00000507293 B4E1Z4 1266 aa13.53□□□□□ -0.24
HMGCS1-204ENST00000507293 HIP1O00291 1037 aa13.53□□□□□ -0.24
HMGCS1-204ENST00000507293 B4GALT4O60513 344 aa13.53□□□□□ -0.24
HMGCS1-204ENST00000507293 RPS6P62753 249 aaKnown RBP13.53□□□□□ -0.24
HMGCS1-204ENST00000507293 PDE4DQ08499 809 aa13.53□□□□□ -0.24
HMGCS1-204ENST00000507293 USH1GQ495M9 461 aa13.53□□□□□ -0.24
HMGCS1-204ENST00000507293 GPATCH4Q5T3I0 446 aaKnown RBP13.53□□□□□ -0.24
HMGCS1-204ENST00000507293 RASIP1Q5U651 963 aa13.53□□□□□ -0.24
HMGCS1-204ENST00000507293 PSRC1Q6PGN9 363 aaPredicted RBP13.53□□□□□ -0.24
HMGCS1-204ENST00000507293 IQCA1Q86XH1 822 aa13.53□□□□□ -0.24
HMGCS1-204ENST00000507293 PNMA1Q8ND90 353 aa13.53□□□□□ -0.24
HMGCS1-204ENST00000507293 TIFAQ96CG3 184 aa13.53□□□□□ -0.24
HMGCS1-204ENST00000507293 SEZ6LQ9BYH1 1024 aa13.53□□□□□ -0.24
HMGCS1-204ENST00000507293 TRPV6Q9H1D0 765 aa13.53□□□□□ -0.24
HMGCS1-204ENST00000507293 KAT14Q9H8E8 782 aa13.53□□□□□ -0.24
HMGCS1-204ENST00000507293 IL23AQ9NPF7 189 aa13.53□□□□□ -0.24
HMGCS1-204ENST00000507293 GRXCR1A8MXD5 290 aa13.52□□□□□ -0.25
HMGCS1-204ENST00000507293 MYL3P08590 195 aa13.52□□□□□ -0.25
HMGCS1-204ENST00000507293 EDNRBP24530 442 aa13.52□□□□□ -0.25
HMGCS1-204ENST00000507293 NT5C2P49902 561 aa13.52□□□□□ -0.25
HMGCS1-204ENST00000507293 GRIN2CQ14957 1233 aa13.52□□□□□ -0.25
HMGCS1-204ENST00000507293 CDC37Q16543 378 aaPredicted RBP13.52□□□□□ -0.25
HMGCS1-204ENST00000507293 CCDC178Q5BJE1 867 aa13.52□□□□□ -0.25
HMGCS1-204ENST00000507293 OR6J1Q8NGC5 347 aa13.52□□□□□ -0.25
HMGCS1-204ENST00000507293 MPHOSPH6Q99547 160 aaKnown RBP13.52□□□□□ -0.25
HMGCS1-204ENST00000507293 DSCC1Q9BVC3 393 aa13.52□□□□□ -0.25
HMGCS1-204ENST00000507293 NOC4LQ9BVI4 516 aaKnown RBP13.52□□□□□ -0.25
HMGCS1-204ENST00000507293 POLR3EQ9NVU0 708 aa13.52□□□□□ -0.25
HMGCS1-204ENST00000507293 TNKSO95271 1327 aa13.51□□□□□ -0.25
HMGCS1-204ENST00000507293 ABCB11O95342 1321 aa13.51□□□□□ -0.25
HMGCS1-204ENST00000507293 PBX2P40425 430 aa13.51□□□□□ -0.25
HMGCS1-204ENST00000507293 CPT1AP50416 773 aa13.51□□□□□ -0.25
HMGCS1-204ENST00000507293 CCL23P55773 120 aa13.51□□□□□ -0.25
HMGCS1-204ENST00000507293 PURAQ00577 322 aaKnown RBP13.51□□□□□ -0.25
HMGCS1-204ENST00000507293 PPP2R5BQ15173 497 aa13.51□□□□□ -0.25
HMGCS1-204ENST00000507293 IMMTQ16891 758 aaKnown RBP13.51□□□□□ -0.25
HMGCS1-204ENST00000507293 ENAHQ8N8S7 591 aaPredicted RBP13.51□□□□□ -0.25
HMGCS1-204ENST00000507293 DNERQ8NFT8 737 aa13.51□□□□□ -0.25
HMGCS1-204ENST00000507293 HERVK_113Q902F9 699 aa13.51□□□□□ -0.25
HMGCS1-204ENST00000507293 ANKS1AQ92625 1134 aa13.51□□□□□ -0.25
HMGCS1-204ENST00000507293 ZSCAN10Q96SZ4 725 aaPredicted RBP13.51□□□□□ -0.25
HMGCS1-204ENST00000507293 COL25A1Q9BXS0 654 aaPredicted RBP13.51□□□□□ -0.25
HMGCS1-204ENST00000507293 PBX4Q9BYU1 374 aa13.51□□□□□ -0.25
HMGCS1-204ENST00000507293 WNT8AQ9H1J5 351 aa13.51□□□□□ -0.25
HMGCS1-204ENST00000507293 ALDH8A1Q9H2A2 487 aaPredicted RBP13.51□□□□□ -0.25
HMGCS1-204ENST00000507293 ZNF576Q9H609 170 aa13.51□□□□□ -0.25
HMGCS1-204ENST00000507293 RAD50Q92878 1312 aa13.5□□□□□ -0.25
HMGCS1-204ENST00000507293 NKRFO15226 690 aaKnown RBP eCLIP13.5□□□□□ -0.25
HMGCS1-204ENST00000507293 FGBP02675 491 aa13.5□□□□□ -0.25
HMGCS1-204ENST00000507293 ASPRV1Q53RT3 343 aa13.5□□□□□ -0.25
HMGCS1-204ENST00000507293 ADGRF4Q8IZF3 695 aa13.5□□□□□ -0.25
HMGCS1-204ENST00000507293 SCFD2Q8WU76 684 aa13.5□□□□□ -0.25
HMGCS1-204ENST00000507293 COPS5Q92905 334 aa13.5□□□□□ -0.25
HMGCS1-204ENST00000507293 MTG1Q9BT17 334 aaPredicted RBP13.5□□□□□ -0.25
HMGCS1-204ENST00000507293 IL25Q9H293 177 aa13.5□□□□□ -0.25
HMGCS1-204ENST00000507293 MTIF3Q9H2K0 278 aaKnown RBP13.5□□□□□ -0.25
HMGCS1-204ENST00000507293 GPHNQ9NQX3 736 aaPredicted RBP13.5□□□□□ -0.25
HMGCS1-204ENST00000507293 TRMT13Q9NUP7 481 aaKnown RBP13.5□□□□□ -0.25
HMGCS1-204ENST00000507293 CXXC1Q9P0U4 656 aaPredicted RBP13.5□□□□□ -0.25
HMGCS1-204ENST00000507293 ZSWIM5Q9P217 1185 aa13.5□□□□□ -0.25
HMGCS1-204ENST00000507293 CTNNA3Q9UI47 895 aa13.5□□□□□ -0.25
HMGCS1-204ENST00000507293 MYH7BA7E2Y1 1941 aa13.49□□□□□ -0.25
HMGCS1-204ENST00000507293 B4DLN1 442 aa13.49□□□□□ -0.25
HMGCS1-204ENST00000507293 DHX16O60231 1041 aaKnown RBP13.49□□□□□ -0.25
HMGCS1-204ENST00000507293 ARIH2O95376 493 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms