RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 SEC63Q9UGP8 760 aaKnown RBP23.01■■□□□ 1.27
SNX25-204ENST00000506896 NAP1L2Q9ULW6 460 aaPredicted RBP23.01■■□□□ 1.27
SNX25-204ENST00000506896 SYNGAP1Q96PV0 1343 aa23.01■■□□□ 1.27
SNX25-204ENST00000506896 GOLGA8AA7E2F4 631 aa23■■□□□ 1.27
SNX25-204ENST00000506896 GOLGA8BA8MQT2 603 aa23■■□□□ 1.27
SNX25-204ENST00000506896 SEPT4O43236 478 aa23■■□□□ 1.27
SNX25-204ENST00000506896 PLEKHA8P1O95397 391 aa23■■□□□ 1.27
SNX25-204ENST00000506896 RNF207Q6ZRF8 634 aa23■■□□□ 1.27
SNX25-204ENST00000506896 SRBD1Q8N5C6 995 aaKnown RBP23■■□□□ 1.27
SNX25-204ENST00000506896 PCDHA1Q9Y5I3 950 aa23■■□□□ 1.27
SNX25-204ENST00000506896 NID2Q14112 1375 aa23■■□□□ 1.27
SNX25-204ENST00000506896 PTPDC1A2A3K4 754 aa22.99■■□□□ 1.27
SNX25-204ENST00000506896 H0YGN5 161 aa22.99■■□□□ 1.27
SNX25-204ENST00000506896 METAP2P50579 478 aaKnown RBP eCLIP22.99■■□□□ 1.27
SNX25-204ENST00000506896 BAATQ14032 418 aaPredicted RBP22.99■■□□□ 1.27
SNX25-204ENST00000506896 FGD4Q96M96 766 aa22.99■■□□□ 1.27
SNX25-204ENST00000506896 C11orf49Q9H6J7 331 aa22.99■■□□□ 1.27
SNX25-204ENST00000506896 ADD3Q9UEY8 706 aaKnown RBP22.99■■□□□ 1.27
SNX25-204ENST00000506896 BAZ2BQ9UIF8 2168 aaKnown RBP22.99■■□□□ 1.27
SNX25-204ENST00000506896 MCM3APO60318 1980 aa22.98■■□□□ 1.27
SNX25-204ENST00000506896 LOC102724159A0A0B4J2E5 919 aa22.98■■□□□ 1.27
SNX25-204ENST00000506896 ASB14A6NK59 587 aa22.98■■□□□ 1.27
SNX25-204ENST00000506896 PPP1R11O60927 126 aaPredicted RBP22.98■■□□□ 1.27
SNX25-204ENST00000506896 CNTN2Q02246 1040 aa22.98■■□□□ 1.27
SNX25-204ENST00000506896 TOB2Q14106 344 aaPredicted RBP22.98■■□□□ 1.27
SNX25-204ENST00000506896 PWP2Q15269 919 aaKnown RBP22.98■■□□□ 1.27
SNX25-204ENST00000506896 SAMD3Q8N6K7 520 aa22.98■■□□□ 1.27
SNX25-204ENST00000506896 ALDH8A1Q9H2A2 487 aaPredicted RBP22.98■■□□□ 1.27
SNX25-204ENST00000506896 CNPY2Q9Y2B0 182 aa22.98■■□□□ 1.27
SNX25-204ENST00000506896 DNAH12Q6ZR08 3092 aa22.98■■□□□ 1.27
SNX25-204ENST00000506896 ZNF865P0CJ78 1059 aaPredicted RBP22.97■■□□□ 1.27
SNX25-204ENST00000506896 RPS6P62753 249 aaKnown RBP22.97■■□□□ 1.27
SNX25-204ENST00000506896 UPF2Q9HAU5 1272 aaKnown RBP22.97■■□□□ 1.27
SNX25-204ENST00000506896 MAP3K20Q9NYL2 800 aaKnown RBP22.97■■□□□ 1.27
SNX25-204ENST00000506896 SOWAHBA6NEL2 793 aa22.96■■□□□ 1.27
SNX25-204ENST00000506896 SNAI1O95863 264 aaPredicted RBP22.96■■□□□ 1.27
SNX25-204ENST00000506896 CALML3P27482 149 aa22.96■■□□□ 1.27
SNX25-204ENST00000506896 ANKRD1Q15327 319 aa22.96■■□□□ 1.27
SNX25-204ENST00000506896 SLC30A10Q6XR72 485 aa22.96■■□□□ 1.27
SNX25-204ENST00000506896 CMTR1Q8N1G2 835 aaKnown RBP22.96■■□□□ 1.27
SNX25-204ENST00000506896 DNERQ8NFT8 737 aa22.96■■□□□ 1.27
SNX25-204ENST00000506896 PIBF1Q8WXW3 757 aa22.96■■□□□ 1.27
SNX25-204ENST00000506896 ZNF274Q96GC6 653 aaPredicted RBP22.96■■□□□ 1.27
SNX25-204ENST00000506896 MPHOSPH6Q99547 160 aaKnown RBP22.96■■□□□ 1.27
SNX25-204ENST00000506896 FAM217BQ9NTX9 383 aaPredicted RBP22.96■■□□□ 1.27
SNX25-204ENST00000506896 NR2E3Q9Y5X4 410 aa22.96■■□□□ 1.27
SNX25-204ENST00000506896 EVI5O60447 810 aa22.95■■□□□ 1.26
SNX25-204ENST00000506896 PDIA3P30101 505 aaKnown RBP22.95■■□□□ 1.26
SNX25-204ENST00000506896 CDC27P30260 824 aa22.95■■□□□ 1.26
SNX25-204ENST00000506896 GHRHRQ02643 423 aa22.95■■□□□ 1.26
SNX25-204ENST00000506896 CCDC82Q8N4S0 544 aa22.95■■□□□ 1.26
SNX25-204ENST00000506896 CNTNAP5Q8WYK1 1306 aa22.95■■□□□ 1.26
SNX25-204ENST00000506896 B4DLN1 442 aa22.94■■□□□ 1.26
SNX25-204ENST00000506896 MRPL12P52815 198 aaKnown RBP22.94■■□□□ 1.26
SNX25-204ENST00000506896 FUT2Q10981 343 aa22.94■■□□□ 1.26
SNX25-204ENST00000506896 ANO1Q5XXA6 986 aa22.94■■□□□ 1.26
SNX25-204ENST00000506896 ARMCX2Q7L311 632 aa22.94■■□□□ 1.26
SNX25-204ENST00000506896 C22orf23Q9BZE7 217 aa22.94■■□□□ 1.26
SNX25-204ENST00000506896 ABHD16BQ9H3Z7 469 aa22.94■■□□□ 1.26
SNX25-204ENST00000506896 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.94■■□□□ 1.26
SNX25-204ENST00000506896 RBM27Q9P2N5 1060 aaKnown RBP22.94■■□□□ 1.26
SNX25-204ENST00000506896 DNM1LO00429 736 aa22.93■■□□□ 1.26
SNX25-204ENST00000506896 ADD1P35611 737 aaKnown RBP22.93■■□□□ 1.26
SNX25-204ENST00000506896 HSD17B4P51659 736 aa22.93■■□□□ 1.26
SNX25-204ENST00000506896 ARRDC4Q8NCT1 418 aa22.93■■□□□ 1.26
SNX25-204ENST00000506896 LCTP09848 1927 aa22.92■■□□□ 1.26
SNX25-204ENST00000506896 ASTN1O14525 1302 aa22.92■■□□□ 1.26
SNX25-204ENST00000506896 OPLAHO14841 1288 aa22.92■■□□□ 1.26
SNX25-204ENST00000506896 CFBP00751 764 aa22.92■■□□□ 1.26
SNX25-204ENST00000506896 RBM25P49756 843 aaKnown RBP22.92■■□□□ 1.26
SNX25-204ENST00000506896 ALDH5A1P51649 535 aaPredicted RBP22.92■■□□□ 1.26
SNX25-204ENST00000506896 SYTL5Q8TDW5 730 aaPredicted RBP22.92■■□□□ 1.26
SNX25-204ENST00000506896 MORC4Q8TE76 937 aa22.92■■□□□ 1.26
SNX25-204ENST00000506896 GCOM1H8Y6P7 765 aaPredicted RBP22.91■■□□□ 1.26
SNX25-204ENST00000506896 hCG_1984214I3L0E3 225 aa22.91■■□□□ 1.26
SNX25-204ENST00000506896 POLR2MP0CAP2 368 aa22.91■■□□□ 1.26
SNX25-204ENST00000506896 NEK4P51957 841 aa22.91■■□□□ 1.26
SNX25-204ENST00000506896 GJC2Q5T442 439 aaPredicted RBP22.91■■□□□ 1.26
SNX25-204ENST00000506896 ZNF713Q8N859 430 aaPredicted RBP22.91■■□□□ 1.26
SNX25-204ENST00000506896 TBC1D5Q92609 795 aa22.91■■□□□ 1.26
SNX25-204ENST00000506896 KATNBL1Q9H079 304 aa22.91■■□□□ 1.26
SNX25-204ENST00000506896 V9GY48 417 aaPredicted RBP22.91■■□□□ 1.26
SNX25-204ENST00000506896 RANBP2P49792 3224 aaKnown RBP22.9■■□□□ 1.26
SNX25-204ENST00000506896 AKR1A1P14550 325 aa22.9■■□□□ 1.26
SNX25-204ENST00000506896 ACVR2BQ13705 512 aa22.9■■□□□ 1.26
SNX25-204ENST00000506896 LRRC41Q15345 812 aa22.9■■□□□ 1.26
SNX25-204ENST00000506896 NSUN6Q8TEA1 469 aaKnown RBP22.9■■□□□ 1.26
SNX25-204ENST00000506896 PURBQ96QR8 312 aaKnown RBP22.9■■□□□ 1.26
SNX25-204ENST00000506896 SENP6Q9GZR1 1112 aaPredicted RBP22.9■■□□□ 1.26
SNX25-204ENST00000506896 COLQQ9Y215 455 aaPredicted RBP22.9■■□□□ 1.26
SNX25-204ENST00000506896 RARBP10826 455 aa22.89■■□□□ 1.25
SNX25-204ENST00000506896 AK2P54819 239 aa22.89■■□□□ 1.25
SNX25-204ENST00000506896 CCT2P78371 535 aaKnown RBP22.89■■□□□ 1.25
SNX25-204ENST00000506896 AKAP17AQ02040 695 aaKnown RBP22.89■■□□□ 1.25
SNX25-204ENST00000506896 LRRC26Q2I0M4 334 aa22.89■■□□□ 1.25
SNX25-204ENST00000506896 CPLX2Q6PUV4 134 aaKnown RBP22.89■■□□□ 1.25
SNX25-204ENST00000506896 HEATR3Q7Z4Q2 680 aa22.89■■□□□ 1.25
SNX25-204ENST00000506896 TEX2Q8IWB9 1127 aa22.89■■□□□ 1.25
SNX25-204ENST00000506896 IWS1Q96ST2 819 aa22.89■■□□□ 1.25
SNX25-204ENST00000506896 RMDN3Q96TC7 470 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms