RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 RPAINQ86UA6 219 aa15.14■□□□□ 0.01
LSM6-204ENST00000504181 FBXO16Q8IX29 292 aaPredicted RBP15.14■□□□□ 0.01
LSM6-204ENST00000504181 SDR42E1Q8WUS8 393 aa15.14■□□□□ 0.01
LSM6-204ENST00000504181 CRNKL1Q9BZJ0 848 aaKnown RBP15.14■□□□□ 0.01
LSM6-204ENST00000504181 IRF2BPLQ9H1B7 796 aa15.14■□□□□ 0.01
LSM6-204ENST00000504181 HOMER2Q9NSB8 354 aa15.14■□□□□ 0.01
LSM6-204ENST00000504181 POLR3EQ9NVU0 708 aa15.14■□□□□ 0.01
LSM6-204ENST00000504181 FBXO40Q9UH90 709 aa15.14■□□□□ 0.01
LSM6-204ENST00000504181 FPGT-TNNI3KV9GXZ4 949 aa15.14■□□□□ 0.01
LSM6-204ENST00000504181 MAGEB6P1A0A0J9YX57 407 aa15.13■□□□□ 0.01
LSM6-204ENST00000504181 PRR23AA6NEV1 266 aa15.13■□□□□ 0.01
LSM6-204ENST00000504181 ATP2A1O14983 1001 aa15.13■□□□□ 0.01
LSM6-204ENST00000504181 MBTPS2O43462 519 aa15.13■□□□□ 0.01
LSM6-204ENST00000504181 ZBED4O75132 1171 aa15.13■□□□□ 0.01
LSM6-204ENST00000504181 BFSP2Q13515 415 aa15.13■□□□□ 0.01
LSM6-204ENST00000504181 TCTN1Q2MV58 587 aa15.13■□□□□ 0.01
LSM6-204ENST00000504181 NBPF20Q3BBV1 942 aa15.13■□□□□ 0.01
LSM6-204ENST00000504181 ZNF512BQ96KM6 892 aaPredicted RBP15.13■□□□□ 0.01
LSM6-204ENST00000504181 TRPC6Q9Y210 931 aa15.13■□□□□ 0.01
LSM6-204ENST00000504181 Q9Y3F1 56 aa15.13■□□□□ 0.01
LSM6-204ENST00000504181 DNAH14Q0VDD8 3507 aa15.12■□□□□ 0.01
LSM6-204ENST00000504181 GVINP1Q7Z2Y8 2422 aa15.12■□□□□ 0.01
LSM6-204ENST00000504181 ASB14A6NK59 587 aa15.12■□□□□ 0.01
LSM6-204ENST00000504181 STXBP3O00186 592 aa15.12■□□□□ 0.01
LSM6-204ENST00000504181 LTBRP36941 435 aa15.12■□□□□ 0.01
LSM6-204ENST00000504181 ZXDAP98168 799 aa15.12■□□□□ 0.01
LSM6-204ENST00000504181 COL19A1Q14993 1142 aa15.12■□□□□ 0.01
LSM6-204ENST00000504181 IQSEC1Q6DN90 963 aa15.12■□□□□ 0.01
LSM6-204ENST00000504181 TAPT1Q6NXT6 567 aa15.12■□□□□ 0.01
LSM6-204ENST00000504181 CNKSR3Q6P9H4 555 aa15.12■□□□□ 0.01
LSM6-204ENST00000504181 FAM133AQ8N9E0 248 aa15.12■□□□□ 0.01
LSM6-204ENST00000504181 PRPF38AQ8NAV1 312 aaKnown RBP15.12■□□□□ 0.01
LSM6-204ENST00000504181 CHST13Q8NET6 341 aa15.12■□□□□ 0.01
LSM6-204ENST00000504181 NSUN3Q9H649 340 aaKnown RBP15.12■□□□□ 0.01
LSM6-204ENST00000504181 ANTXR1Q9H6X2 564 aa15.12■□□□□ 0.01
LSM6-204ENST00000504181 DCP1AQ9NPI6 582 aaPredicted RBP15.12■□□□□ 0.01
LSM6-204ENST00000504181 SMC4Q9NTJ3 1288 aa15.12■□□□□ 0.01
LSM6-204ENST00000504181 NOD1Q9Y239 953 aa15.12■□□□□ 0.01
LSM6-204ENST00000504181 PROB1E7EW31 1015 aa15.11■□□□□ 0.01
LSM6-204ENST00000504181 GPNMBQ14956 572 aa15.11■□□□□ 0.01
LSM6-204ENST00000504181 LRRFIP1Q32MZ4 808 aaKnown RBP15.11■□□□□ 0.01
LSM6-204ENST00000504181 KIFC2Q96AC6 838 aa15.11■□□□□ 0.01
LSM6-204ENST00000504181 CCDC17Q96LX7 622 aa15.11■□□□□ 0.01
LSM6-204ENST00000504181 MTG1Q9BT17 334 aaPredicted RBP15.11■□□□□ 0.01
LSM6-204ENST00000504181 FSD1Q9BTV5 496 aa15.11■□□□□ 0.01
LSM6-204ENST00000504181 GPR108Q9NPR9 543 aa15.11■□□□□ 0.01
LSM6-204ENST00000504181 GPHNQ9NQX3 736 aaPredicted RBP15.11■□□□□ 0.01
LSM6-204ENST00000504181 TLR7Q9NYK1 1049 aaKnown RBP15.11■□□□□ 0.01
LSM6-204ENST00000504181 MYH7BA7E2Y1 1941 aa15.11■□□□□ 0.01
LSM6-204ENST00000504181 BAHCC1Q9P281 2608 aa15.11■□□□□ 0.01
LSM6-204ENST00000504181 KIAA1671Q9BY89 1806 aa15.1■□□□□ 0.01
LSM6-204ENST00000504181 PNMA6EA0A0J9YXQ4 647 aa15.1■□□□□ 0.01
LSM6-204ENST00000504181 MED19A0JLT2 244 aaPredicted RBP15.1■□□□□ 0.01
LSM6-204ENST00000504181 AVPR2P30518 371 aa15.1■□□□□ 0.01
LSM6-204ENST00000504181 CDK8P49336 464 aa15.1■□□□□ 0.01
LSM6-204ENST00000504181 DLX2Q07687 328 aaPredicted RBP15.1■□□□□ 0.01
LSM6-204ENST00000504181 GPM6BQ13491 265 aa15.1■□□□□ 0.01
LSM6-204ENST00000504181 EPC2Q52LR7 807 aa15.1■□□□□ 0.01
LSM6-204ENST00000504181 KIAA1211Q6ZU35 1233 aa15.1■□□□□ 0.01
LSM6-204ENST00000504181 KANSL2Q9H9L4 492 aa15.1■□□□□ 0.01
LSM6-204ENST00000504181 COG6Q9Y2V7 657 aa15.1■□□□□ 0.01
LSM6-204ENST00000504181 CYP2D7A0A087X1C5 515 aa15.09■□□□□ 0.01
LSM6-204ENST00000504181 KDM4AO75164 1064 aa15.09■□□□□ 0.01
LSM6-204ENST00000504181 CPT1AP50416 773 aa15.09■□□□□ 0.01
LSM6-204ENST00000504181 CHMP4BP1P59074 171 aa15.09■□□□□ 0.01
LSM6-204ENST00000504181 CCDC155Q8N6L0 562 aa15.09■□□□□ 0.01
LSM6-204ENST00000504181 AFAP1L1Q8TED9 768 aa15.09■□□□□ 0.01
LSM6-204ENST00000504181 ACAD9Q9H845 621 aa15.09■□□□□ 0.01
LSM6-204ENST00000504181 SLC38A10Q9HBR0 1119 aa15.09■□□□□ 0.01
LSM6-204ENST00000504181 A1CFQ9NQ94 594 aaKnown RBP15.09■□□□□ 0.01
LSM6-204ENST00000504181 INSL6Q9Y581 213 aa15.09■□□□□ 0.01
LSM6-204ENST00000504181 ABHD14A-ACY1A0A1B0GW23 586 aa15.08■□□□□ 0
LSM6-204ENST00000504181 USP17L12C9JPN9 530 aa15.08■□□□□ 0
LSM6-204ENST00000504181 USP17L21D6R901 530 aa15.08■□□□□ 0
LSM6-204ENST00000504181 H3BNC9 293 aa15.08■□□□□ 0
LSM6-204ENST00000504181 GNAI3P08754 354 aa15.08■□□□□ 0
LSM6-204ENST00000504181 POLA2Q14181 598 aa15.08■□□□□ 0
LSM6-204ENST00000504181 ALDH1L2Q3SY69 923 aa15.08■□□□□ 0
LSM6-204ENST00000504181 DUSP28Q4G0W2 176 aa15.08■□□□□ 0
LSM6-204ENST00000504181 NFRKBQ6P4R8 1299 aa15.08■□□□□ 0
LSM6-204ENST00000504181 LRRC8DQ7L1W4 858 aa15.08■□□□□ 0
LSM6-204ENST00000504181 LCORLQ8N3X6 602 aa15.08■□□□□ 0
LSM6-204ENST00000504181 DBNLQ9UJU6 430 aaKnown RBP15.08■□□□□ 0
LSM6-204ENST00000504181 KIAA1217Q5T5P2 1943 aa15.07■□□□□ 0
LSM6-204ENST00000504181 MYO10Q9HD67 2058 aa15.07■□□□□ 0
LSM6-204ENST00000504181 E9PSI1 815 aa15.07■□□□□ 0
LSM6-204ENST00000504181 F5H6K3 240 aa15.07■□□□□ 0
LSM6-204ENST00000504181 NBNO60934 754 aa15.07■□□□□ 0
LSM6-204ENST00000504181 NDUFB10O96000 172 aa15.07■□□□□ 0
LSM6-204ENST00000504181 KLRC3Q07444 240 aa15.07■□□□□ 0
LSM6-204ENST00000504181 SIGLEC14Q08ET2 396 aa15.07■□□□□ 0
LSM6-204ENST00000504181 OS9Q13438 667 aaPredicted RBP15.07■□□□□ 0
LSM6-204ENST00000504181 SMAD4Q13485 552 aaKnown RBP15.07■□□□□ 0
LSM6-204ENST00000504181 PTGISQ16647 500 aa15.07■□□□□ 0
LSM6-204ENST00000504181 OR6J1Q8NGC5 347 aa15.07■□□□□ 0
LSM6-204ENST00000504181 CAGE1Q8TC20 777 aa15.07■□□□□ 0
LSM6-204ENST00000504181 SAMD11Q96NU1 681 aa15.07■□□□□ 0
LSM6-204ENST00000504181 CCDC8Q9H0W5 538 aaPredicted RBP15.07■□□□□ 0
LSM6-204ENST00000504181 VTA1Q9NP79 307 aa15.07■□□□□ 0
LSM6-204ENST00000504181 NOB1Q9ULX3 412 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms