RNA–Protein interactions for RNA: ENST00000504015.2

ALYREF-201, Transcript of Aly/REF export factor, humanhuman

TSL 3

Gene ALYREF, Length 254 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-201ENST00000504015 PDE4DQ08499 809 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 TBC1D8BQ0IIM8 1120 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 TERF2Q15554 542 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 CALCRLQ16602 461 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 TXNRD1Q16881 649 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 INF2Q27J81 1249 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 KIF4BQ2VIQ3 1234 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 HSP90AA4PQ58FG1 418 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 ZNF569Q5MCW4 686 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 MFSD14BQ5SR56 506 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 HYIQ5T013 277 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 FKBP15Q5T1M5 1219 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 COL13A1Q5TAT6 717 aaPredicted RBP4.35□□□□□ -1.71
ALYREF-201ENST00000504015 IQCEQ6IPM2 695 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 CENPPQ6IPU0 288 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 TYW1BQ6NUM6 668 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 MOXD1Q6UVY6 613 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 HHIPL2Q6UWX4 724 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 FAM196AQ6ZSG2 479 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 UNC13DQ70J99 1090 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 USP17L1Q7RTZ2 530 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 MAPKAPK5Q8IW41 473 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 SMYD4Q8IYR2 804 aaPredicted RBP4.35□□□□□ -1.71
ALYREF-201ENST00000504015 PROM2Q8N271 834 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 CSGALNACT2Q8N6G5 542 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 TBC1D16Q8TBP0 767 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 CPLX3Q8WVH0 158 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 RUBCNQ92622 972 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 STAMQ92783 540 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 GPKOWQ92917 476 aaPredicted RBP eCLIP4.35□□□□□ -1.71
ALYREF-201ENST00000504015 DYNLL2Q96FJ2 89 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 CEP95Q96GE4 821 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 TRIM47Q96LD4 638 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 WDR24Q96S15 920 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 EIF3CQ99613 913 aaKnown RBP4.35□□□□□ -1.71
ALYREF-201ENST00000504015 NAPGQ99747 312 aaPredicted RBP4.35□□□□□ -1.71
ALYREF-201ENST00000504015 ZC3H12CQ9C0D7 883 aaKnown RBP4.35□□□□□ -1.71
ALYREF-201ENST00000504015 NT5C3AQ9H0P0 336 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 TMX4Q9H1E5 349 aaPredicted RBP4.35□□□□□ -1.71
ALYREF-201ENST00000504015 EHD4Q9H223 541 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 BLZF1Q9H2G9 400 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 TMEM60Q9H2L4 133 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 ACBD3Q9H3P7 528 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 MRPL44Q9H9J2 332 aaKnown RBP4.35□□□□□ -1.71
ALYREF-201ENST00000504015 BMP2KQ9NSY1 1161 aaPredicted RBP4.35□□□□□ -1.71
ALYREF-201ENST00000504015 ZNF446Q9NWS9 450 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 MTMR4Q9NYA4 1195 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 TAB2Q9NYJ8 693 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 LRWD1Q9UFC0 647 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 RAB21Q9UL25 225 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 ATP6V0A2Q9Y487 856 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 FHOD1Q9Y613 1164 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 KDM3AQ9Y4C1 1321 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 TTC26A0AVF1 554 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 CCDC66A2RUB6 948 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 CTAGE15A4D2H0 777 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 TBX3O15119 743 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 FANCGO15287 622 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 USO1O60763 962 aaKnown RBP4.34□□□□□ -1.71
ALYREF-201ENST00000504015 LCA5LO95447 670 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 HLA-DOAP06340 250 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 CTAGE8P0CG41 777 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 PLCG1P19174 1290 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 TRIM21P19474 475 aaKnown RBP4.34□□□□□ -1.71
ALYREF-201ENST00000504015 CCT6AP40227 531 aaKnown RBP4.34□□□□□ -1.71
ALYREF-201ENST00000504015 ARHGAP25P42331 645 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 TECP42680 631 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 MTIF2P46199 727 aaKnown RBP4.34□□□□□ -1.71
ALYREF-201ENST00000504015 CLK2P49760 499 aaKnown RBP4.34□□□□□ -1.71
ALYREF-201ENST00000504015 USP11P51784 963 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 KCNQ4P56696 695 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 ERVK-24P63145 666 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 ASIC1P78348 528 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 ITIH3Q06033 890 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 CKAP4Q07065 602 aaKnown RBP4.34□□□□□ -1.71
ALYREF-201ENST00000504015 GOLGA8FQ08AF8 430 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 ZNF543Q08ER8 600 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 GOLGA8DPQ0D2H9 430 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 KIF5AQ12840 1032 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 MTF1Q14872 753 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 SPA17Q15506 151 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 DIXDC1Q155Q3 683 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 MAN2A1Q16706 1144 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 SLC35G1Q2M3R5 365 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 LETM2Q2VYF4 491 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 MAP9Q49MG5 647 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 VWA3BQ502W6 1294 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 PAPD7Q5XG87 772 aaKnown RBP4.34□□□□□ -1.71
ALYREF-201ENST00000504015 KRT79Q5XKE5 535 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 CC2D1AQ6P1N0 951 aaPredicted RBP4.34□□□□□ -1.71
ALYREF-201ENST00000504015 WDR93Q6P2C0 686 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 USP17L2Q6R6M4 530 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 HDXQ7Z353 690 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 PODNQ7Z5L7 613 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 CTAGE6Q86UF2 777 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 CTAGE4Q8IX94 777 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 TNS4Q8IZW8 715 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 NLGN1Q8N2Q7 840 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 SLC35F6Q8N357 371 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 CCDC155Q8N6L0 562 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms