RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 PDLIM1O00151 329 aa10.75□□□□□ -0.69
PDLIM5-207ENST00000503974 CCDC175P0C221 793 aa10.75□□□□□ -0.69
PDLIM5-207ENST00000503974 GCLCP48506 637 aaPredicted RBP10.75□□□□□ -0.69
PDLIM5-207ENST00000503974 FNTAP49354 379 aa10.75□□□□□ -0.69
PDLIM5-207ENST00000503974 ZNF394Q53GI3 561 aa10.75□□□□□ -0.69
PDLIM5-207ENST00000503974 KRT26Q7Z3Y9 468 aa10.75□□□□□ -0.69
PDLIM5-207ENST00000503974 METTL16Q86W50 562 aaKnown RBP10.75□□□□□ -0.69
PDLIM5-207ENST00000503974 MYOCDQ8IZQ8 938 aa10.75□□□□□ -0.69
PDLIM5-207ENST00000503974 RBM46Q8TBY0 533 aaKnown RBP10.75□□□□□ -0.69
PDLIM5-207ENST00000503974 TAF4BQ92750 862 aa10.75□□□□□ -0.69
PDLIM5-207ENST00000503974 MAP4K1Q92918 833 aa10.75□□□□□ -0.69
PDLIM5-207ENST00000503974 FUT8Q9BYC5 575 aa10.75□□□□□ -0.69
PDLIM5-207ENST00000503974 PARD6BQ9BYG5 372 aa10.75□□□□□ -0.69
PDLIM5-207ENST00000503974 NACAP1Q9BZK3 213 aa10.75□□□□□ -0.69
PDLIM5-207ENST00000503974 TMEM39BQ9GZU3 492 aa10.75□□□□□ -0.69
PDLIM5-207ENST00000503974 TRPM7Q96QT4 1865 aa10.74□□□□□ -0.69
PDLIM5-207ENST00000503974 ITGBL1O95965 494 aaPredicted RBP10.74□□□□□ -0.69
PDLIM5-207ENST00000503974 FGAP02671 866 aa10.74□□□□□ -0.69
PDLIM5-207ENST00000503974 MAP3K10Q02779 954 aa10.74□□□□□ -0.69
PDLIM5-207ENST00000503974 PTH1RQ03431 593 aa10.74□□□□□ -0.69
PDLIM5-207ENST00000503974 TCP10Q12799 353 aa10.74□□□□□ -0.69
PDLIM5-207ENST00000503974 MAP1SQ66K74 1059 aaPredicted RBP10.74□□□□□ -0.69
PDLIM5-207ENST00000503974 MICALCLQ6ZW33 695 aa10.74□□□□□ -0.69
PDLIM5-207ENST00000503974 CDAN1Q8IWY9 1227 aa10.74□□□□□ -0.69
PDLIM5-207ENST00000503974 GLIS2Q9BZE0 524 aaPredicted RBP10.74□□□□□ -0.69
PDLIM5-207ENST00000503974 EHD4Q9H223 541 aa10.74□□□□□ -0.69
PDLIM5-207ENST00000503974 CLEC11AQ9Y240 323 aa10.74□□□□□ -0.69
PDLIM5-207ENST00000503974 STK24Q9Y6E0 443 aa10.74□□□□□ -0.69
PDLIM5-207ENST00000503974 ZEB2O60315 1214 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 KRT38O76015 456 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 TOMM70O94826 608 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 SCNN1BP51168 640 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 C12orf60Q5U649 245 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 SLC30A9Q6PML9 568 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 TTC30AQ86WT1 665 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 LRRN4CLQ8ND94 238 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 SLC35B4Q969S0 331 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 RBM41Q96IZ5 413 aaKnown RBP10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 SCLT1Q96NL6 688 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 DUSP9Q99956 384 aaKnown RBP10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 NAPBQ9H115 298 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 ATP6V0A4Q9HBG4 840 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 KCND1Q9NSA2 647 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 MCM9Q9NXL9 1143 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 VPS18Q9P253 973 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 SCAF8Q9UPN6 1271 aaKnown RBP10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 ATP8A1Q9Y2Q0 1164 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 PPME1Q9Y570 386 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 USP17L12C9JPN9 530 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 USP17L21D6R901 530 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 TBC1D12O60347 775 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 ZNF189O75820 626 aaPredicted RBP10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 RNF8O76064 485 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 VDRP11473 427 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 ATP2B2Q01814 1243 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 GABPAQ06546 454 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 TMEM62Q0P6H9 643 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 TTC6Q86TZ1 520 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 USP48Q86UV5 1035 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 SMC1BQ8NDV3 1235 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 MAGEC3Q8TD91 643 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 NUP133Q8WUM0 1156 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 CDCA5Q96FF9 252 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 OSBPL9Q96SU4 736 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 TRIM4Q9C037 500 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 ANO2Q9NQ90 1003 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 DDX20Q9UHI6 824 aaKnown RBP10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 PALD1Q9ULE6 856 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 ITM2BQ9Y287 266 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 FAM169AQ9Y6X4 670 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 OTOFQ9HC10 1997 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 PASKQ96RG2 1323 aa10.73□□□□□ -0.69
PDLIM5-207ENST00000503974 MAP2K7O14733 419 aa10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 TPPPO94811 219 aa10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 RPL13P26373 211 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 INPP5BP32019 993 aa10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 PLCD1P51178 756 aa10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 ROR2Q01974 943 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 LRRC23Q53EV4 343 aaPredicted RBP10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 NBPF12Q5TAG4 269 aaPredicted RBP10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 WDR78Q5VTH9 848 aa10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 UBXN4Q92575 508 aa10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 ALS2CR12Q96Q35 445 aa10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 CSRNP1Q96S65 589 aa10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 PI4KBQ9UBF8 816 aa10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 SAP30BPQ9UHR5 308 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 PUF60Q9UHX1 559 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 DNAI1Q9UI46 699 aa10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 ERLIN1O75477 346 aa10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 HLA-DOAP06340 250 aa10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 CYP2D6P10635 497 aa10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 HARSP12081 509 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 EVX2Q03828 476 aa10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 PPARAQ07869 468 aa10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 POSTNQ15063 836 aa10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 NECTIN1Q15223 517 aa10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 CCDC183Q5T5S1 534 aa10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 MTHFD1LQ6UB35 978 aa10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 KIRREL3Q8IZU9 778 aa10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 HOOK2Q96ED9 719 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms