RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 OR52Z1P0C646 297 aa9.23□□□□□ -0.93
TOPBP1-202ENST00000503338 OSBPP22059 807 aa9.23□□□□□ -0.93
TOPBP1-202ENST00000503338 SREBF1P36956 1147 aa9.23□□□□□ -0.93
TOPBP1-202ENST00000503338 SYKP43405 635 aa9.23□□□□□ -0.93
TOPBP1-202ENST00000503338 IRX3P78415 501 aaPredicted RBP9.23□□□□□ -0.93
TOPBP1-202ENST00000503338 GSE1Q14687 1217 aa9.23□□□□□ -0.93
TOPBP1-202ENST00000503338 ZSCAN23Q3MJ62 389 aa9.23□□□□□ -0.93
TOPBP1-202ENST00000503338 CHADLQ6NUI6 762 aa9.23□□□□□ -0.93
TOPBP1-202ENST00000503338 LBX2Q6XYB7 198 aa9.23□□□□□ -0.93
TOPBP1-202ENST00000503338 DTHD1Q6ZMT9 781 aa9.23□□□□□ -0.93
TOPBP1-202ENST00000503338 ELOA2Q8IYF1 753 aaPredicted RBP9.23□□□□□ -0.93
TOPBP1-202ENST00000503338 OPTNQ96CV9 577 aa9.23□□□□□ -0.93
TOPBP1-202ENST00000503338 AK8Q96MA6 479 aa9.23□□□□□ -0.93
TOPBP1-202ENST00000503338 TEX13BQ9BXU2 312 aa9.23□□□□□ -0.93
TOPBP1-202ENST00000503338 GZF1Q9H116 711 aaPredicted RBP9.23□□□□□ -0.93
TOPBP1-202ENST00000503338 CLSTN2Q9H4D0 955 aa9.23□□□□□ -0.93
TOPBP1-202ENST00000503338 TMEM63CQ9P1W3 806 aa9.23□□□□□ -0.93
TOPBP1-202ENST00000503338 PNMA3Q9UL41 463 aa9.23□□□□□ -0.93
TOPBP1-202ENST00000503338 FZD1Q9UP38 647 aa9.23□□□□□ -0.93
TOPBP1-202ENST00000503338 SLC45A1Q9Y2W3 748 aa9.23□□□□□ -0.93
TOPBP1-202ENST00000503338 STK24Q9Y6E0 443 aa9.23□□□□□ -0.93
TOPBP1-202ENST00000503338 ZNF536O15090 1300 aa9.23□□□□□ -0.93
TOPBP1-202ENST00000503338 PHIPQ8WWQ0 1821 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 CYP3A7-CYP3A51PA0A087WV96 503 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 TBX3O15119 743 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 NR1I2O75469 434 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 CELF2O95319 508 aaKnown RBP9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 CFBP00751 764 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 CYP3A4P08684 503 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 POTEIP0CG38 1075 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 POTEJP0CG39 1038 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 ZBTB48P10074 688 aaPredicted RBP9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 CETPP11597 493 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 PFKFB1P16118 471 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 LIG1P18858 919 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 CYP3A7P24462 503 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 CIITAP33076 1130 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 HSD17B4P51659 736 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 GTF2A2P52657 109 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 SNAP25P60880 206 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 ARHGAP4P98171 946 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 UBE2SQ16763 222 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 TMEM266Q2M3C6 531 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 KANK3Q6NY19 840 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 USP17L6PQ6QN14 398 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 SAMD1Q6SPF0 538 aaPredicted RBP9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 GADL1Q6ZQY3 521 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 SLFN12Q8IYM2 578 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 FMR1NBQ8N0W7 255 aaPredicted RBP9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 CPXCR1Q8N123 301 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 ENGASEQ8NFI3 743 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 ATG4CQ96DT6 458 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 CLMNQ96JQ2 1002 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 TNMDQ9H2S6 317 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 ZNF408Q9H9D4 720 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 RAVER2Q9HCJ3 691 aaKnown RBP9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 TMEM260Q9NX78 707 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 FBXO40Q9UH90 709 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 HPSEQ9Y251 543 aa9.22□□□□□ -0.93
TOPBP1-202ENST00000503338 A0A1B0GVL5 298 aa9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 SPDYE16A6NNV3 312 aaPredicted RBP9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 OPLAHO14841 1288 aa9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 SLC26A4O43511 780 aa9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 ZNF202O95125 648 aa9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 ALAS1P13196 640 aa9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 STAT3P40763 770 aa9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 NDUFA8P51970 172 aa9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 SNW1Q13573 536 aaKnown RBP9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 CALCRLQ16602 461 aa9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 Q4G0T1 1027 aa9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 NOM1Q5C9Z4 860 aaKnown RBP9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 XRRA1Q6P2D8 792 aa9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 SHC4Q6S5L8 630 aa9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 LRSAM1Q6UWE0 723 aa9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 DLK2Q6UY11 383 aa9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 C4orf32Q8N8J7 132 aa9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 CHST13Q8NET6 341 aa9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 REPS2Q8NFH8 660 aa9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 AGBL1Q96MI9 1066 aa9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 MBOAT7Q96N66 472 aa9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 TRERF1Q96PN7 1200 aa9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 SDF4Q9BRK5 362 aa9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 CSRNP2Q9H175 543 aa9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 GOLPH3LQ9H4A5 285 aa9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 NMRK2Q9NPI5 230 aa9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 DDX25Q9UHL0 483 aaKnown RBP9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 KCNH3Q9ULD8 1083 aa9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 OTOFQ9HC10 1997 aa9.21□□□□□ -0.94
TOPBP1-202ENST00000503338 VWA3AA6NCI4 1184 aa9.2□□□□□ -0.94
TOPBP1-202ENST00000503338 TRAF5O00463 557 aa9.2□□□□□ -0.94
TOPBP1-202ENST00000503338 ADAMTS3O15072 1205 aa9.2□□□□□ -0.94
TOPBP1-202ENST00000503338 MARCH6O60337 910 aa9.2□□□□□ -0.94
TOPBP1-202ENST00000503338 CAVIN2O95810 425 aa9.2□□□□□ -0.94
TOPBP1-202ENST00000503338 SLC25A27O95847 323 aa9.2□□□□□ -0.94
TOPBP1-202ENST00000503338 ATXN8OSP0DMR3 200 aa9.2□□□□□ -0.94
TOPBP1-202ENST00000503338 CCDC192P0DO97 292 aa9.2□□□□□ -0.94
TOPBP1-202ENST00000503338 FXR2P51116 673 aaKnown RBP eCLIP9.2□□□□□ -0.94
TOPBP1-202ENST00000503338 SETQ01105 290 aaPredicted RBP9.2□□□□□ -0.94
TOPBP1-202ENST00000503338 PDIA5Q14554 519 aa9.2□□□□□ -0.94
TOPBP1-202ENST00000503338 ZRSR1Q15695 479 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms