RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 AGAP1Q9UPQ3 857 aa11.23□□□□□ -0.61
LINC00488-201ENST00000494582 AFDNP55196 1824 aaKnown RBP11.22□□□□□ -0.61
LINC00488-201ENST00000494582 EPHB6O15197 1021 aa11.22□□□□□ -0.61
LINC00488-201ENST00000494582 DIAPH2O60879 1101 aa11.22□□□□□ -0.61
LINC00488-201ENST00000494582 CAND2O75155 1236 aa11.22□□□□□ -0.61
LINC00488-201ENST00000494582 PECAM1P16284 738 aaPredicted RBP11.22□□□□□ -0.61
LINC00488-201ENST00000494582 TCP1P17987 556 aaKnown RBP11.22□□□□□ -0.61
LINC00488-201ENST00000494582 TRIM21P19474 475 aaKnown RBP11.22□□□□□ -0.61
LINC00488-201ENST00000494582 RNASE9P60153 205 aaKnown RBP11.22□□□□□ -0.61
LINC00488-201ENST00000494582 TCIRG1Q13488 830 aa11.22□□□□□ -0.61
LINC00488-201ENST00000494582 NBPF9Q3BBW0 867 aa11.22□□□□□ -0.61
LINC00488-201ENST00000494582 ZC3H12AQ5D1E8 599 aaKnown RBP11.22□□□□□ -0.61
LINC00488-201ENST00000494582 KLHDC7AQ5VTJ3 777 aa11.22□□□□□ -0.61
LINC00488-201ENST00000494582 TYW1BQ6NUM6 668 aa11.22□□□□□ -0.61
LINC00488-201ENST00000494582 TMC4Q7Z404 712 aa11.22□□□□□ -0.61
LINC00488-201ENST00000494582 TBC1D1Q86TI0 1168 aaPredicted RBP11.22□□□□□ -0.61
LINC00488-201ENST00000494582 PNMA8AQ86V59 439 aaPredicted RBP11.22□□□□□ -0.61
LINC00488-201ENST00000494582 SGMS1Q86VZ5 419 aa11.22□□□□□ -0.61
LINC00488-201ENST00000494582 SPICE1Q8N0Z3 855 aa11.22□□□□□ -0.61
LINC00488-201ENST00000494582 MDM1Q8TC05 714 aa11.22□□□□□ -0.61
LINC00488-201ENST00000494582 KRT12Q99456 494 aa11.22□□□□□ -0.61
LINC00488-201ENST00000494582 IFIH1Q9BYX4 1025 aaKnown RBP11.22□□□□□ -0.61
LINC00488-201ENST00000494582 KDM4CQ9H3R0 1056 aa11.22□□□□□ -0.61
LINC00488-201ENST00000494582 IRAK4Q9NWZ3 460 aa11.22□□□□□ -0.61
LINC00488-201ENST00000494582 SLC5A4Q9NY91 659 aa11.22□□□□□ -0.61
LINC00488-201ENST00000494582 PARP4Q9UKK3 1724 aaKnown RBP11.22□□□□□ -0.61
LINC00488-201ENST00000494582 TRIM75PA6NK02 468 aa11.22□□□□□ -0.61
LINC00488-201ENST00000494582 GHRP10912 638 aa11.22□□□□□ -0.61
LINC00488-201ENST00000494582 ZNF174Q15697 407 aa11.22□□□□□ -0.61
LINC00488-201ENST00000494582 IL17AQ16552 155 aa11.22□□□□□ -0.61
LINC00488-201ENST00000494582 ZNF658Q5TYW1 1059 aaPredicted RBP11.22□□□□□ -0.61
LINC00488-201ENST00000494582 C3orf20Q8ND61 904 aa11.22□□□□□ -0.61
LINC00488-201ENST00000494582 PRCCQ92733 491 aaPredicted RBP11.22□□□□□ -0.61
LINC00488-201ENST00000494582 NEUROG2Q9H2A3 272 aa11.22□□□□□ -0.61
LINC00488-201ENST00000494582 PLCB1Q9NQ66 1216 aa11.22□□□□□ -0.61
LINC00488-201ENST00000494582 LAMB4A4D0S4 1761 aa11.21□□□□□ -0.61
LINC00488-201ENST00000494582 hCG_1642624A0A1W2PR95 340 aa11.21□□□□□ -0.61
LINC00488-201ENST00000494582 CCT8L1PA6NM43 557 aa11.21□□□□□ -0.61
LINC00488-201ENST00000494582 A8MUI8 341 aa11.21□□□□□ -0.61
LINC00488-201ENST00000494582 RAD51CO43502 376 aa11.21□□□□□ -0.61
LINC00488-201ENST00000494582 BUB1O43683 1085 aa11.21□□□□□ -0.61
LINC00488-201ENST00000494582 TRIM37O94972 964 aa11.21□□□□□ -0.61
LINC00488-201ENST00000494582 IPO7O95373 1038 aaKnown RBP11.21□□□□□ -0.61
LINC00488-201ENST00000494582 FLT3P36888 993 aa11.21□□□□□ -0.61
LINC00488-201ENST00000494582 ZBED6P86452 979 aa11.21□□□□□ -0.61
LINC00488-201ENST00000494582 DDX42Q86XP3 938 aaKnown RBP eCLIP11.21□□□□□ -0.61
LINC00488-201ENST00000494582 LPIN2Q92539 896 aa11.21□□□□□ -0.61
LINC00488-201ENST00000494582 CCDC47Q96A33 483 aaKnown RBP11.21□□□□□ -0.61
LINC00488-201ENST00000494582 ZKSCAN3Q9BRR0 538 aa11.21□□□□□ -0.61
LINC00488-201ENST00000494582 TAF1DQ9H5J8 278 aaPredicted RBP11.21□□□□□ -0.61
LINC00488-201ENST00000494582 GPR108Q9NPR9 543 aa11.21□□□□□ -0.61
LINC00488-201ENST00000494582 ZSWIM5Q9P217 1185 aa11.21□□□□□ -0.61
LINC00488-201ENST00000494582 SLC12A4Q9UP95 1085 aa11.21□□□□□ -0.61
LINC00488-201ENST00000494582 CEP131Q9UPN4 1083 aa11.21□□□□□ -0.61
LINC00488-201ENST00000494582 SLC12A7Q9Y666 1083 aa11.21□□□□□ -0.61
LINC00488-201ENST00000494582 H7C1D1 291 aa11.2□□□□□ -0.62
LINC00488-201ENST00000494582 MPHOSPH10O00566 681 aaKnown RBP11.2□□□□□ -0.62
LINC00488-201ENST00000494582 RPN1P04843 607 aaKnown RBP11.2□□□□□ -0.62
LINC00488-201ENST00000494582 PAEPP09466 180 aa11.2□□□□□ -0.62
LINC00488-201ENST00000494582 PAFAH1B1P43034 410 aa11.2□□□□□ -0.62
LINC00488-201ENST00000494582 ERVK-9P63128 1117 aa11.2□□□□□ -0.62
LINC00488-201ENST00000494582 KCNJ2P63252 427 aa11.2□□□□□ -0.62
LINC00488-201ENST00000494582 CRELD2Q6UXH1 353 aaPredicted RBP11.2□□□□□ -0.62
LINC00488-201ENST00000494582 MAEAQ7L5Y9 396 aa11.2□□□□□ -0.62
LINC00488-201ENST00000494582 ADSSL1Q8N142 457 aa11.2□□□□□ -0.62
LINC00488-201ENST00000494582 ITFG2Q969R8 447 aa11.2□□□□□ -0.62
LINC00488-201ENST00000494582 CCDC42Q96M95 316 aa11.2□□□□□ -0.62
LINC00488-201ENST00000494582 FAM167BQ9BTA0 163 aa11.2□□□□□ -0.62
LINC00488-201ENST00000494582 MTFR1LQ9H019 292 aa11.2□□□□□ -0.62
LINC00488-201ENST00000494582 ARHGEF10LQ9HCE6 1279 aa11.2□□□□□ -0.62
LINC00488-201ENST00000494582 CPSF2Q9P2I0 782 aaKnown RBP11.2□□□□□ -0.62
LINC00488-201ENST00000494582 CORO1CQ9ULV4 474 aaPredicted RBP11.2□□□□□ -0.62
LINC00488-201ENST00000494582 ADAMTS13Q76LX8 1427 aa11.2□□□□□ -0.62
LINC00488-201ENST00000494582 DIP2BQ9P265 1576 aa11.2□□□□□ -0.62
LINC00488-201ENST00000494582 SPEF2Q9C093 1822 aa11.2□□□□□ -0.62
LINC00488-201ENST00000494582 GCOM1H8Y6P7 765 aaPredicted RBP11.2□□□□□ -0.62
LINC00488-201ENST00000494582 ORC4O43929 436 aa11.2□□□□□ -0.62
LINC00488-201ENST00000494582 PRDM1O75626 825 aa11.2□□□□□ -0.62
LINC00488-201ENST00000494582 MYZAPP0CAP1 466 aa11.2□□□□□ -0.62
LINC00488-201ENST00000494582 EIF4A3P38919 411 aaKnown RBP11.2□□□□□ -0.62
LINC00488-201ENST00000494582 PPP2R2AP63151 447 aa11.2□□□□□ -0.62
LINC00488-201ENST00000494582 GKAP1Q5VSY0 366 aaPredicted RBP11.2□□□□□ -0.62
LINC00488-201ENST00000494582 CRACR2BQ8N4Y2 399 aaPredicted RBP11.2□□□□□ -0.62
LINC00488-201ENST00000494582 ABTB2Q8N961 1025 aa11.2□□□□□ -0.62
LINC00488-201ENST00000494582 CCDC63Q8NA47 563 aa11.2□□□□□ -0.62
LINC00488-201ENST00000494582 TSGA10Q9BZW7 698 aa11.2□□□□□ -0.62
LINC00488-201ENST00000494582 ZNHIT6Q9NWK9 470 aaKnown RBP11.2□□□□□ -0.62
LINC00488-201ENST00000494582 NOVA2Q9UNW9 492 aaKnown RBP11.2□□□□□ -0.62
LINC00488-201ENST00000494582 TBC1D2BQ9UPU7 963 aa11.2□□□□□ -0.62
LINC00488-201ENST00000494582 FER1L4A9Z1Z3 1794 aa11.2□□□□□ -0.62
LINC00488-201ENST00000494582 SPATA31A3Q5VYP0 1347 aa11.2□□□□□ -0.62
LINC00488-201ENST00000494582 A6NHS1 94 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 IFIT3O14879 490 aaKnown RBP11.19□□□□□ -0.62
LINC00488-201ENST00000494582 GTPBP6O43824 516 aaPredicted RBP11.19□□□□□ -0.62
LINC00488-201ENST00000494582 IL15P40933 162 aaPredicted RBP11.19□□□□□ -0.62
LINC00488-201ENST00000494582 KIF11P52732 1056 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 RBBP5Q15291 538 aaKnown RBP11.19□□□□□ -0.62
LINC00488-201ENST00000494582 SPA17Q15506 151 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 TBC1D25Q3MII6 688 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 CPLX4Q7Z7G2 160 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms