RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 PODNQ7Z5L7 613 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 EHBP1Q8NDI1 1231 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 GOLGA1Q92805 767 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 CUL5Q93034 780 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 KIFC2Q96AC6 838 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 CARD6Q9BX69 1037 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 USP40Q9NVE5 1235 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 BIN2Q9UBW5 565 aaPredicted RBP10.8□□□□□ -0.68
NPHP3-209ENST00000493732 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.8□□□□□ -0.68
NPHP3-209ENST00000493732 CAPN11Q9UMQ6 739 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 V9GYY5 206 aaPredicted RBP10.8□□□□□ -0.68
NPHP3-209ENST00000493732 CTAGE9A4FU28 777 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 PP2D1A8MPX8 630 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 IPO7O95373 1038 aaKnown RBP10.8□□□□□ -0.68
NPHP3-209ENST00000493732 SRGNP10124 158 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 HDLBPQ00341 1268 aaKnown RBP10.8□□□□□ -0.68
NPHP3-209ENST00000493732 PICALMQ13492 652 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 FIGNQ5HY92 759 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 FKBP15Q5T1M5 1219 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 UTP14CQ5TAP6 766 aaKnown RBP10.8□□□□□ -0.68
NPHP3-209ENST00000493732 KRT27Q7Z3Y8 459 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 IRF2BP1Q8IU81 584 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 CREBRFQ8IUR6 639 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 ZNF507Q8TCN5 953 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 WDR24Q96S15 920 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 DNAJC7Q99615 494 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 DESI2Q9BSY9 194 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 SPDYE4A6NLX3 237 aa10.79□□□□□ -0.68
NPHP3-209ENST00000493732 RIMBP2O15034 1052 aa10.79□□□□□ -0.68
NPHP3-209ENST00000493732 ZBTB5O15062 677 aa10.79□□□□□ -0.68
NPHP3-209ENST00000493732 NPM3O75607 178 aaKnown RBP10.79□□□□□ -0.68
NPHP3-209ENST00000493732 AKR1B1P15121 316 aa10.79□□□□□ -0.68
NPHP3-209ENST00000493732 TXKP42681 527 aa10.79□□□□□ -0.68
NPHP3-209ENST00000493732 ZNF662Q6ZS27 426 aa10.79□□□□□ -0.68
NPHP3-209ENST00000493732 UNC13DQ70J99 1090 aa10.79□□□□□ -0.68
NPHP3-209ENST00000493732 TEX2Q8IWB9 1127 aa10.79□□□□□ -0.68
NPHP3-209ENST00000493732 CCDC170Q8IYT3 715 aa10.79□□□□□ -0.68
NPHP3-209ENST00000493732 MASTLQ96GX5 879 aa10.79□□□□□ -0.68
NPHP3-209ENST00000493732 TUBGCP2Q9BSJ2 902 aa10.79□□□□□ -0.68
NPHP3-209ENST00000493732 UBA5Q9GZZ9 404 aa10.79□□□□□ -0.68
NPHP3-209ENST00000493732 NT5C3AQ9H0P0 336 aa10.79□□□□□ -0.68
NPHP3-209ENST00000493732 HAUS4Q9H6D7 363 aa10.79□□□□□ -0.68
NPHP3-209ENST00000493732 QTRT2Q9H974 415 aaKnown RBP10.79□□□□□ -0.68
NPHP3-209ENST00000493732 MRPL44Q9H9J2 332 aaKnown RBP10.79□□□□□ -0.68
NPHP3-209ENST00000493732 LZTFL1Q9NQ48 299 aa10.79□□□□□ -0.68
NPHP3-209ENST00000493732 BMP2KQ9NSY1 1161 aaPredicted RBP10.79□□□□□ -0.68
NPHP3-209ENST00000493732 CDC23Q9UJX2 597 aa10.79□□□□□ -0.68
NPHP3-209ENST00000493732 MAPK8IP1Q9UQF2 711 aa10.79□□□□□ -0.68
NPHP3-209ENST00000493732 STK24Q9Y6E0 443 aa10.79□□□□□ -0.68
NPHP3-209ENST00000493732 EPN1Q9Y6I3 576 aaPredicted RBP10.79□□□□□ -0.68
NPHP3-209ENST00000493732 A0A1W2PQJ5 194 aa10.78□□□□□ -0.68
NPHP3-209ENST00000493732 PES1O00541 588 aaKnown RBP10.78□□□□□ -0.68
NPHP3-209ENST00000493732 CYLC1P35663 651 aaPredicted RBP10.78□□□□□ -0.68
NPHP3-209ENST00000493732 LRRC63Q05C16 580 aa10.78□□□□□ -0.68
NPHP3-209ENST00000493732 MTF1Q14872 753 aa10.78□□□□□ -0.68
NPHP3-209ENST00000493732 SRGAP1Q7Z6B7 1085 aa10.78□□□□□ -0.68
NPHP3-209ENST00000493732 CCDC84Q86UT8 332 aaPredicted RBP10.78□□□□□ -0.68
NPHP3-209ENST00000493732 LARP4BQ92615 738 aaKnown RBP10.78□□□□□ -0.68
NPHP3-209ENST00000493732 JMJD4Q9H9V9 463 aa10.78□□□□□ -0.68
NPHP3-209ENST00000493732 FAM53CQ9NYF3 392 aa10.78□□□□□ -0.68
NPHP3-209ENST00000493732 KDM3AQ9Y4C1 1321 aa10.78□□□□□ -0.68
NPHP3-209ENST00000493732 MARCH6O60337 910 aa10.78□□□□□ -0.68
NPHP3-209ENST00000493732 KIF20AO95235 890 aa10.78□□□□□ -0.68
NPHP3-209ENST00000493732 NDUFA10O95299 355 aa10.78□□□□□ -0.68
NPHP3-209ENST00000493732 MTIF2P46199 727 aaKnown RBP10.78□□□□□ -0.68
NPHP3-209ENST00000493732 ZBED6P86452 979 aa10.78□□□□□ -0.68
NPHP3-209ENST00000493732 CDK17Q00537 523 aa10.78□□□□□ -0.68
NPHP3-209ENST00000493732 TBC1D8BQ0IIM8 1120 aa10.78□□□□□ -0.68
NPHP3-209ENST00000493732 WHAMMP3Q1A5X7 153 aa10.78□□□□□ -0.68
NPHP3-209ENST00000493732 KIF4BQ2VIQ3 1234 aa10.78□□□□□ -0.68
NPHP3-209ENST00000493732 ZNF569Q5MCW4 686 aa10.78□□□□□ -0.68
NPHP3-209ENST00000493732 CENPPQ6IPU0 288 aa10.78□□□□□ -0.68
NPHP3-209ENST00000493732 CDC42EP5Q6NZY7 148 aa10.78□□□□□ -0.68
NPHP3-209ENST00000493732 ARHGAP27Q6ZUM4 889 aa10.78□□□□□ -0.68
NPHP3-209ENST00000493732 RSRC2Q7L4I2 434 aaKnown RBP10.78□□□□□ -0.68
NPHP3-209ENST00000493732 ZSCAN29Q8IWY8 852 aaPredicted RBP10.78□□□□□ -0.68
NPHP3-209ENST00000493732 ADGRF4Q8IZF3 695 aa10.78□□□□□ -0.68
NPHP3-209ENST00000493732 GUF1Q8N442 669 aaKnown RBP10.78□□□□□ -0.68
NPHP3-209ENST00000493732 DCAF4Q8WV16 495 aa10.78□□□□□ -0.68
NPHP3-209ENST00000493732 MKL1Q969V6 931 aa10.78□□□□□ -0.68
NPHP3-209ENST00000493732 MTMR8Q96EF0 704 aa10.78□□□□□ -0.68
NPHP3-209ENST00000493732 ZDHHC15Q96MV8 337 aa10.78□□□□□ -0.68
NPHP3-209ENST00000493732 ERGIC2Q96RQ1 377 aa10.78□□□□□ -0.68
NPHP3-209ENST00000493732 PLIN2Q99541 437 aa10.78□□□□□ -0.68
NPHP3-209ENST00000493732 NAPGQ99747 312 aaPredicted RBP10.78□□□□□ -0.68
NPHP3-209ENST00000493732 TSG101Q99816 390 aa10.78□□□□□ -0.68
NPHP3-209ENST00000493732 MMTAG2Q9BU76 263 aaKnown RBP10.78□□□□□ -0.68
NPHP3-209ENST00000493732 CPVLQ9H3G5 476 aa10.78□□□□□ -0.68
NPHP3-209ENST00000493732 FRMPD2Q68DX3 1309 aaPredicted RBP10.77□□□□□ -0.69
NPHP3-209ENST00000493732 MYH8P13535 1937 aa10.77□□□□□ -0.69
NPHP3-209ENST00000493732 TTC26A0AVF1 554 aa10.77□□□□□ -0.69
NPHP3-209ENST00000493732 TRIM49BA6NDI0 452 aa10.77□□□□□ -0.69
NPHP3-209ENST00000493732 TRIM21P19474 475 aaKnown RBP10.77□□□□□ -0.69
NPHP3-209ENST00000493732 SHMT1P34896 483 aa10.77□□□□□ -0.69
NPHP3-209ENST00000493732 CLK2P49760 499 aaKnown RBP10.77□□□□□ -0.69
NPHP3-209ENST00000493732 USP11P51784 963 aa10.77□□□□□ -0.69
NPHP3-209ENST00000493732 CLCN6P51797 869 aa10.77□□□□□ -0.69
NPHP3-209ENST00000493732 TRAF1Q13077 416 aa10.77□□□□□ -0.69
NPHP3-209ENST00000493732 MOXD1Q6UVY6 613 aa10.77□□□□□ -0.69
NPHP3-209ENST00000493732 LRRC47Q8N1G4 583 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms