RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 ZBED6P86452 979 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 MTA1Q13330 715 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 SCARF1Q14162 830 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 ALX1Q15699 326 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 HLFQ16534 295 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 ATP2B3Q16720 1220 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 DDR2Q16832 855 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 IMMTQ16891 758 aaKnown RBP4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 METTL24Q5JXM2 366 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 WDR45BQ5MNZ6 344 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 PERM1Q5SV97 790 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 ZSCAN25Q6NSZ9 544 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 C16orf46Q6P387 395 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 MZT2AQ6P582 158 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 LVRNQ6Q4G3 990 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 NUDT18Q6ZVK8 323 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 UBE2Q1Q7Z7E8 422 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 ZNF34Q8IZ26 560 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 OR8H2Q8N162 312 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 TDRD7Q8NHU6 1098 aaKnown RBP4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 NCOA7Q8NI08 942 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 BICD2Q8TD16 824 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 FRS2Q8WU20 508 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 PTCD2Q8WV60 388 aaKnown RBP4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 NINJ1Q92982 152 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 MTMR8Q96EF0 704 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 DDX11Q96FC9 970 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 FAM89AQ96GI7 184 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 CCDC34Q96HJ3 373 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 CDK5RAP3Q96JB5 506 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 ZNF396Q96N95 335 aaPredicted RBP4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 SLC4A9Q96Q91 983 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 USP28Q96RU2 1077 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 NUDT12Q9BQG2 462 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 SARGQ9BW04 601 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 TNMDQ9H2S6 317 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 SPTLC3Q9NUV7 552 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 TSKSQ9UJT2 592 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 POLIQ9UNA4 740 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 PCDHGA11Q9Y5H2 935 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 LRP5O75197 1615 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 CARMIL3Q8ND23 1372 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 ZMYM6O95789 1325 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 MROH5Q6ZUA9 1318 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 STRCQ7RTU9 1775 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 A0A087X0B3 334 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 A0A1W2PQ27 194 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 A0A1W2PQ64 194 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 A0A1W2PQD8 194 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 TCRBV5S4A2TA0A5A2 114 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 FAM170AA1A519 330 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 KLRG2A4D1S0 409 aaPredicted RBP4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 A6NCN8 305 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 POTEMA6NI47 508 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 MINDY4BA8MYZ0 360 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 EIF1AYO14602 144 aaKnown RBP4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 ZNF213O14771 459 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 OPLAHO14841 1288 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 GPAA1O43292 621 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 RRP9O43818 475 aaKnown RBP4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 PDE8BO95263 885 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 YEATS4O95619 227 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 AGR2O95994 175 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 SLC5A1P13866 664 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 CPEP16870 476 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 ZSCAN20P17040 1043 aaPredicted RBP4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 OAS2P29728 719 aaKnown RBP4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 CDC25BP30305 580 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 PEX19P40855 299 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 MCAMP43121 646 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 SOX9P48436 509 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 BCAMP50895 628 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 RENBPP51606 427 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 EIF5P55010 431 aaKnown RBP4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 ANTXR2P58335 489 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 CCT2P78371 535 aaKnown RBP4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 PTK2Q05397 1052 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 SEPT6Q14141 434 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 NOLC1Q14978 699 aaKnown RBP eCLIP4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 ERFEQ4G0M1 354 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 COBLL1Q53SF7 1204 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 SARM1Q6SZW1 724 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 SASS6Q6UVJ0 657 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 C16orf54Q6UWD8 224 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 LDHAL6AQ6ZMR3 332 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 TOGARAM2Q6ZUX3 1019 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 RSRC2Q7L4I2 434 aaKnown RBP4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 BRAPQ7Z569 592 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 SNX32Q86XE0 403 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 TRIM22Q8IYM9 498 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 ZNF513Q8N8E2 541 aaPredicted RBP4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 ENGASEQ8NFI3 743 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 KIAA1524Q8TCG1 905 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 ATXN2LQ8WWM7 1075 aaKnown RBP4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 SCG3Q8WXD2 468 aaKnown RBP4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 LPIN2Q92539 896 aa4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 EAF1Q96JC9 268 aaPredicted RBP4.28□□□□□ -1.72
ATPAF1-206ENST00000492233 TMEM87BQ96K49 555 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms