RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 CCDC113Q9H0I3 377 aa5.89□□□□□ -1.47
VTA1-204ENST00000491881 GP6Q9HCN6 339 aa5.89□□□□□ -1.47
VTA1-204ENST00000491881 LUC7LQ9NQ29 371 aaKnown RBP5.89□□□□□ -1.47
VTA1-204ENST00000491881 SNTG2Q9NY99 539 aa5.89□□□□□ -1.47
VTA1-204ENST00000491881 WHRNQ9P202 907 aa5.89□□□□□ -1.47
VTA1-204ENST00000491881 CDK11AQ9UQ88 783 aaPredicted RBP5.89□□□□□ -1.47
VTA1-204ENST00000491881 MSRB2Q9Y3D2 182 aa5.89□□□□□ -1.47
VTA1-204ENST00000491881 ZNF451Q9Y4E5 1061 aa5.89□□□□□ -1.47
VTA1-204ENST00000491881 ZC3H12DA2A288 527 aaKnown RBP5.88□□□□□ -1.47
VTA1-204ENST00000491881 AGRPO00253 132 aa5.88□□□□□ -1.47
VTA1-204ENST00000491881 SHOXO15266 292 aa5.88□□□□□ -1.47
VTA1-204ENST00000491881 ARL4AP40617 200 aa5.88□□□□□ -1.47
VTA1-204ENST00000491881 ERVFRD-1P60508 538 aa5.88□□□□□ -1.47
VTA1-204ENST00000491881 PLP2Q04941 152 aa5.88□□□□□ -1.47
VTA1-204ENST00000491881 RASA3Q14644 834 aa5.88□□□□□ -1.47
VTA1-204ENST00000491881 SPATS1Q496A3 300 aa5.88□□□□□ -1.47
VTA1-204ENST00000491881 SV2CQ496J9 727 aa5.88□□□□□ -1.47
VTA1-204ENST00000491881 MTERF2Q49AM1 385 aa5.88□□□□□ -1.47
VTA1-204ENST00000491881 TMC3Q7Z5M5 1100 aa5.88□□□□□ -1.47
VTA1-204ENST00000491881 ZNF655Q8N720 491 aaPredicted RBP5.88□□□□□ -1.47
VTA1-204ENST00000491881 LINC01356Q8N9X3 169 aa5.88□□□□□ -1.47
VTA1-204ENST00000491881 ST13P5Q8NFI4 369 aaPredicted RBP5.88□□□□□ -1.47
VTA1-204ENST00000491881 ADCY4Q8NFM4 1077 aa5.88□□□□□ -1.47
VTA1-204ENST00000491881 PLCD4Q9BRC7 762 aa5.88□□□□□ -1.47
VTA1-204ENST00000491881 KLHL25Q9H0H3 589 aa5.88□□□□□ -1.47
VTA1-204ENST00000491881 EPN3Q9H201 632 aa5.88□□□□□ -1.47
VTA1-204ENST00000491881 GFOD1Q9NXC2 390 aa5.88□□□□□ -1.47
VTA1-204ENST00000491881 LRP2BPQ9P2M1 347 aa5.88□□□□□ -1.47
VTA1-204ENST00000491881 TMEM82A0PJX8 343 aa5.87□□□□□ -1.47
VTA1-204ENST00000491881 SIGLEC6O43699 453 aa5.87□□□□□ -1.47
VTA1-204ENST00000491881 PRAMEF1O95521 474 aa5.87□□□□□ -1.47
VTA1-204ENST00000491881 SYPP08247 313 aa5.87□□□□□ -1.47
VTA1-204ENST00000491881 TMEM62Q0P6H9 643 aa5.87□□□□□ -1.47
VTA1-204ENST00000491881 RASGRF1Q13972 1273 aa5.87□□□□□ -1.47
VTA1-204ENST00000491881 ZPBP2Q6X784 338 aa5.87□□□□□ -1.47
VTA1-204ENST00000491881 TMC6Q7Z403 805 aa5.87□□□□□ -1.47
VTA1-204ENST00000491881 LDHDQ86WU2 507 aa5.87□□□□□ -1.47
VTA1-204ENST00000491881 LINC00116Q8NCU8 138 aa5.87□□□□□ -1.47
VTA1-204ENST00000491881 BRF1Q92994 677 aa5.87□□□□□ -1.47
VTA1-204ENST00000491881 PWWP2AQ96N64 755 aa5.87□□□□□ -1.47
VTA1-204ENST00000491881 TMPRSS5Q9H3S3 457 aa5.87□□□□□ -1.47
VTA1-204ENST00000491881 CHST7Q9NS84 486 aa5.87□□□□□ -1.47
VTA1-204ENST00000491881 PRR13Q9NZ81 148 aa5.87□□□□□ -1.47
VTA1-204ENST00000491881 FHOD1Q9Y613 1164 aa5.87□□□□□ -1.47
VTA1-204ENST00000491881 TAF6LQ9Y6J9 622 aa5.87□□□□□ -1.47
VTA1-204ENST00000491881 FAM221BA6H8Z2 402 aa5.86□□□□□ -1.47
VTA1-204ENST00000491881 MEIS1O00470 390 aa5.86□□□□□ -1.47
VTA1-204ENST00000491881 NOP56O00567 594 aaKnown RBP5.86□□□□□ -1.47
VTA1-204ENST00000491881 ZNF445P59923 1031 aa5.86□□□□□ -1.47
VTA1-204ENST00000491881 PPP2R5DQ14738 602 aa5.86□□□□□ -1.47
VTA1-204ENST00000491881 ZXDCQ2QGD7 858 aaPredicted RBP5.86□□□□□ -1.47
VTA1-204ENST00000491881 SLC10A6Q3KNW5 377 aa5.86□□□□□ -1.47
VTA1-204ENST00000491881 CWF19L1Q69YN2 538 aaKnown RBP5.86□□□□□ -1.47
VTA1-204ENST00000491881 GALNT18Q6P9A2 607 aa5.86□□□□□ -1.47
VTA1-204ENST00000491881 FRMD5Q7Z6J6 570 aa5.86□□□□□ -1.47
VTA1-204ENST00000491881 IGDCC3Q8IVU1 814 aa5.86□□□□□ -1.47
VTA1-204ENST00000491881 CRACR2BQ8N4Y2 399 aaPredicted RBP5.86□□□□□ -1.47
VTA1-204ENST00000491881 FIBCD1Q8N539 461 aa5.86□□□□□ -1.47
VTA1-204ENST00000491881 BDH2Q9BUT1 245 aa5.86□□□□□ -1.47
VTA1-204ENST00000491881 PIF1Q9H611 641 aa5.86□□□□□ -1.47
VTA1-204ENST00000491881 NOL6Q9H6R4 1146 aaKnown RBP5.86□□□□□ -1.47
VTA1-204ENST00000491881 KLHL14Q9P2G3 628 aa5.86□□□□□ -1.47
VTA1-204ENST00000491881 TNFRSF10DQ9UBN6 386 aa5.86□□□□□ -1.47
VTA1-204ENST00000491881 SUSD2Q9UGT4 822 aa5.86□□□□□ -1.47
VTA1-204ENST00000491881 SF3B6Q9Y3B4 125 aaKnown RBP5.86□□□□□ -1.47
VTA1-204ENST00000491881 A0A087WZG4 1122 aa5.85□□□□□ -1.47
VTA1-204ENST00000491881 IQCA1LA6NCM1 817 aa5.85□□□□□ -1.47
VTA1-204ENST00000491881 LAPTM5Q13571 262 aa5.85□□□□□ -1.47
VTA1-204ENST00000491881 RAB3GAP1Q15042 981 aa5.85□□□□□ -1.47
VTA1-204ENST00000491881 HSF5Q4G112 596 aaPredicted RBP5.85□□□□□ -1.47
VTA1-204ENST00000491881 POMZP3Q6PJE2 187 aa5.85□□□□□ -1.47
VTA1-204ENST00000491881 NOP9Q86U38 636 aaKnown RBP5.85□□□□□ -1.47
VTA1-204ENST00000491881 FCRL2Q96LA5 508 aaPredicted RBP5.85□□□□□ -1.47
VTA1-204ENST00000491881 ZDHHC15Q96MV8 337 aa5.85□□□□□ -1.47
VTA1-204ENST00000491881 DNAJC7Q99615 494 aa5.85□□□□□ -1.47
VTA1-204ENST00000491881 APEX2Q9UBZ4 518 aa5.85□□□□□ -1.47
VTA1-204ENST00000491881 PFDN2Q9UHV9 154 aa5.85□□□□□ -1.47
VTA1-204ENST00000491881 DIS3Q9Y2L1 958 aaKnown RBP5.85□□□□□ -1.47
VTA1-204ENST00000491881 WTIPA6NIX2 430 aaPredicted RBP5.84□□□□□ -1.47
VTA1-204ENST00000491881 FADS2P1A8MWK0 482 aa5.84□□□□□ -1.47
VTA1-204ENST00000491881 NUDT19A8MXV4 375 aa5.84□□□□□ -1.47
VTA1-204ENST00000491881 BUB1BO60566 1050 aaPredicted RBP5.84□□□□□ -1.47
VTA1-204ENST00000491881 NCKAP1LP55160 1127 aa5.84□□□□□ -1.47
VTA1-204ENST00000491881 SSRP1Q08945 709 aaKnown RBP5.84□□□□□ -1.47
VTA1-204ENST00000491881 EFEMP1Q12805 493 aa5.84□□□□□ -1.47
VTA1-204ENST00000491881 KIR3DS1Q14943 382 aa5.84□□□□□ -1.47
VTA1-204ENST00000491881 LRRC47Q8N1G4 583 aaKnown RBP5.84□□□□□ -1.47
VTA1-204ENST00000491881 BVESQ8NE79 360 aa5.84□□□□□ -1.47
VTA1-204ENST00000491881 ZNF669Q96BR6 464 aaPredicted RBP5.84□□□□□ -1.47
VTA1-204ENST00000491881 RCC1LQ96I51 464 aaKnown RBP5.84□□□□□ -1.47
VTA1-204ENST00000491881 CGGBP1Q9UFW8 167 aaPredicted RBP5.84□□□□□ -1.47
VTA1-204ENST00000491881 MINPP1Q9UNW1 487 aa5.84□□□□□ -1.47
VTA1-204ENST00000491881 AKT3Q9Y243 479 aa5.84□□□□□ -1.47
VTA1-204ENST00000491881 GPR55Q9Y2T6 319 aaPredicted RBP5.84□□□□□ -1.47
VTA1-204ENST00000491881 PCDHA5Q9Y5H7 936 aa5.84□□□□□ -1.47
VTA1-204ENST00000491881 GSNP06396 782 aa5.83□□□□□ -1.48
VTA1-204ENST00000491881 PRKCAP17252 672 aa5.83□□□□□ -1.48
VTA1-204ENST00000491881 KCNC1P48547 511 aa5.83□□□□□ -1.48
VTA1-204ENST00000491881 CYP4F8P98187 520 aa5.83□□□□□ -1.48
VTA1-204ENST00000491881 CRTC3Q6UUV7 619 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms