RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 FANCIQ9NVI1 1328 aa6.02□□□□□ -1.45
RTN4-215ENST00000491592 TMEM82A0PJX8 343 aa6.02□□□□□ -1.45
RTN4-215ENST00000491592 CCER2I3L3R5 266 aa6.02□□□□□ -1.45
RTN4-215ENST00000491592 VAMP4O75379 141 aa6.02□□□□□ -1.45
RTN4-215ENST00000491592 C8AP07357 584 aa6.02□□□□□ -1.45
RTN4-215ENST00000491592 HSP90AA1P07900 732 aaKnown RBP6.02□□□□□ -1.45
RTN4-215ENST00000491592 ENDOUP21128 410 aaKnown RBP6.02□□□□□ -1.45
RTN4-215ENST00000491592 CALRP27797 417 aaKnown RBP6.02□□□□□ -1.45
RTN4-215ENST00000491592 PLCL1Q15111 1095 aa6.02□□□□□ -1.45
RTN4-215ENST00000491592 C4orf46Q504U0 113 aa6.02□□□□□ -1.45
RTN4-215ENST00000491592 RTP2Q5QGT7 225 aa6.02□□□□□ -1.45
RTN4-215ENST00000491592 WAPLQ7Z5K2 1190 aa6.02□□□□□ -1.45
RTN4-215ENST00000491592 ALPK1Q96QP1 1244 aa6.02□□□□□ -1.45
RTN4-215ENST00000491592 MCMBPQ9BTE3 642 aa6.02□□□□□ -1.45
RTN4-215ENST00000491592 AARSD1Q9BTE6 412 aaKnown RBP6.02□□□□□ -1.45
RTN4-215ENST00000491592 SPATA9Q9BWV2 254 aa6.02□□□□□ -1.45
RTN4-215ENST00000491592 CDADC1Q9BWV3 514 aa6.02□□□□□ -1.45
RTN4-215ENST00000491592 PRDM7Q9NQW5 492 aa6.02□□□□□ -1.45
RTN4-215ENST00000491592 ARHGEF4Q9NR80 690 aa6.02□□□□□ -1.45
RTN4-215ENST00000491592 SLAMF8Q9P0V8 285 aa6.02□□□□□ -1.45
RTN4-215ENST00000491592 ANP32CO43423 234 aa6.01□□□□□ -1.45
RTN4-215ENST00000491592 ADCY3O60266 1144 aa6.01□□□□□ -1.45
RTN4-215ENST00000491592 PAX3P23760 479 aa6.01□□□□□ -1.45
RTN4-215ENST00000491592 RPL10P27635 214 aaKnown RBP6.01□□□□□ -1.45
RTN4-215ENST00000491592 FOXD4Q12950 439 aaPredicted RBP6.01□□□□□ -1.45
RTN4-215ENST00000491592 BIRC2Q13490 618 aa6.01□□□□□ -1.45
RTN4-215ENST00000491592 C2orf27AQ580R0 203 aa6.01□□□□□ -1.45
RTN4-215ENST00000491592 ERICH6BQ5W0A0 696 aa6.01□□□□□ -1.45
RTN4-215ENST00000491592 FAM43BQ6ZT52 329 aaPredicted RBP6.01□□□□□ -1.45
RTN4-215ENST00000491592 JAZF1Q86VZ6 243 aa6.01□□□□□ -1.45
RTN4-215ENST00000491592 FCRL2Q96LA5 508 aaPredicted RBP6.01□□□□□ -1.45
RTN4-215ENST00000491592 FCRL3Q96P31 734 aaPredicted RBP6.01□□□□□ -1.45
RTN4-215ENST00000491592 NKX2-4Q9H2Z4 354 aa6.01□□□□□ -1.45
RTN4-215ENST00000491592 AP5S1Q9NUS5 200 aa6.01□□□□□ -1.45
RTN4-215ENST00000491592 ADAMTS6Q9UKP5 1117 aa6.01□□□□□ -1.45
RTN4-215ENST00000491592 PNMA2Q9UL42 364 aa6.01□□□□□ -1.45
RTN4-215ENST00000491592 BACE2Q9Y5Z0 518 aa6.01□□□□□ -1.45
RTN4-215ENST00000491592 SMARCA4P51532 1647 aa6□□□□□ -1.45
RTN4-215ENST00000491592 DNAJC25-GNG10A0A024R161 153 aa6□□□□□ -1.45
RTN4-215ENST00000491592 TRAV20A0A0B4J274 112 aa6□□□□□ -1.45
RTN4-215ENST00000491592 EXOC5O00471 708 aa6□□□□□ -1.45
RTN4-215ENST00000491592 AURKAO14965 403 aa6□□□□□ -1.45
RTN4-215ENST00000491592 WDHD1O75717 1129 aaPredicted RBP6□□□□□ -1.45
RTN4-215ENST00000491592 GSTM1P09488 218 aa6□□□□□ -1.45
RTN4-215ENST00000491592 HSD3B2P26439 372 aa6□□□□□ -1.45
RTN4-215ENST00000491592 GRIA2P42262 883 aa6□□□□□ -1.45
RTN4-215ENST00000491592 SCRN1Q12765 414 aa6□□□□□ -1.45
RTN4-215ENST00000491592 HSP90AA2PQ14568 343 aaPredicted RBP6□□□□□ -1.45
RTN4-215ENST00000491592 RALGPS1Q5JS13 557 aa6□□□□□ -1.45
RTN4-215ENST00000491592 RCSD1Q6JBY9 416 aa6□□□□□ -1.45
RTN4-215ENST00000491592 SLC23A3Q6PIS1 610 aa6□□□□□ -1.45
RTN4-215ENST00000491592 CLEC4GQ6UXB4 293 aa6□□□□□ -1.45
RTN4-215ENST00000491592 ZPBP2Q6X784 338 aa6□□□□□ -1.45
RTN4-215ENST00000491592 KSR1Q8IVT5 923 aa6□□□□□ -1.45
RTN4-215ENST00000491592 SYTL4Q96C24 671 aaPredicted RBP6□□□□□ -1.45
RTN4-215ENST00000491592 EVI5LQ96CN4 794 aa6□□□□□ -1.45
RTN4-215ENST00000491592 ERVK13-1Q9NX77 482 aa6□□□□□ -1.45
RTN4-215ENST00000491592 GABBR1Q9UBS5 961 aa6□□□□□ -1.45
RTN4-215ENST00000491592 TMEM59LQ9UK28 342 aa6□□□□□ -1.45
RTN4-215ENST00000491592 ZNF281Q9Y2X9 895 aa6□□□□□ -1.45
RTN4-215ENST00000491592 COL4A3BPQ9Y5P4 624 aa6□□□□□ -1.45
RTN4-215ENST00000491592 BIN1O00499 593 aa5.99□□□□□ -1.45
RTN4-215ENST00000491592 FGF10O15520 208 aaPredicted RBP5.99□□□□□ -1.45
RTN4-215ENST00000491592 S100BP04271 92 aaPredicted RBP5.99□□□□□ -1.45
RTN4-215ENST00000491592 CAPNS1P04632 268 aa5.99□□□□□ -1.45
RTN4-215ENST00000491592 SNRPB2P08579 225 aaKnown RBP5.99□□□□□ -1.45
RTN4-215ENST00000491592 NOP2P46087 812 aaKnown RBP5.99□□□□□ -1.45
RTN4-215ENST00000491592 GFRA1P56159 465 aa5.99□□□□□ -1.45
RTN4-215ENST00000491592 DUSP4Q13115 394 aa5.99□□□□□ -1.45
RTN4-215ENST00000491592 CYP2R1Q6VVX0 501 aa5.99□□□□□ -1.45
RTN4-215ENST00000491592 NLGN1Q8N2Q7 840 aa5.99□□□□□ -1.45
RTN4-215ENST00000491592 LILRB2Q8N423 598 aa5.99□□□□□ -1.45
RTN4-215ENST00000491592 NAT16Q8N8M0 369 aa5.99□□□□□ -1.45
RTN4-215ENST00000491592 PI4K2BQ8TCG2 481 aa5.99□□□□□ -1.45
RTN4-215ENST00000491592 THAP3Q8WTV1 239 aaPredicted RBP5.99□□□□□ -1.45
RTN4-215ENST00000491592 IER2Q9BTL4 223 aa5.99□□□□□ -1.45
RTN4-215ENST00000491592 IRF2BPLQ9H1B7 796 aa5.99□□□□□ -1.45
RTN4-215ENST00000491592 MBNL3Q9NUK0 354 aaKnown RBP5.99□□□□□ -1.45
RTN4-215ENST00000491592 GEMIN8Q9NWZ8 242 aaKnown RBP5.99□□□□□ -1.45
RTN4-215ENST00000491592 PTCH2Q9Y6C5 1203 aa5.99□□□□□ -1.45
RTN4-215ENST00000491592 RUSC2Q8N2Y8 1516 aa5.99□□□□□ -1.45
RTN4-215ENST00000491592 RRBP1Q9P2E9 1410 aaKnown RBP5.99□□□□□ -1.45
RTN4-215ENST00000491592 C2orf71A6NGG8 1288 aa5.98□□□□□ -1.45
RTN4-215ENST00000491592 RNASE1P07998 156 aaKnown RBP5.98□□□□□ -1.45
RTN4-215ENST00000491592 ZGLP1P0C6A0 271 aa5.98□□□□□ -1.45
RTN4-215ENST00000491592 FGFR1P11362 822 aa5.98□□□□□ -1.45
RTN4-215ENST00000491592 SEPHS1P49903 392 aa5.98□□□□□ -1.45
RTN4-215ENST00000491592 CYP4F3Q08477 520 aa5.98□□□□□ -1.45
RTN4-215ENST00000491592 ZNF792Q3KQV3 632 aa5.98□□□□□ -1.45
RTN4-215ENST00000491592 PLEKHG6Q3KR16 790 aa5.98□□□□□ -1.45
RTN4-215ENST00000491592 YOD1Q5VVQ6 348 aaPredicted RBP5.98□□□□□ -1.45
RTN4-215ENST00000491592 EEF1DP3Q658K8 133 aa5.98□□□□□ -1.45
RTN4-215ENST00000491592 JMYQ8N9B5 988 aa5.98□□□□□ -1.45
RTN4-215ENST00000491592 ZBTB38Q8NAP3 1195 aaPredicted RBP5.98□□□□□ -1.45
RTN4-215ENST00000491592 SH3TC2Q8TF17 1288 aa5.98□□□□□ -1.45
RTN4-215ENST00000491592 COPS5Q92905 334 aa5.98□□□□□ -1.45
RTN4-215ENST00000491592 CCDC120Q96HB5 630 aa5.98□□□□□ -1.45
RTN4-215ENST00000491592 MAP6Q96JE9 813 aa5.98□□□□□ -1.45
RTN4-215ENST00000491592 SCYL1Q96KG9 808 aa5.98□□□□□ -1.45
RTN4-215ENST00000491592 SENP7Q9BQF6 1050 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms