RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 VAV1P15498 845 aa4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 BMP8BP34820 402 aa4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 CEBPAP49715 358 aaPredicted RBP4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 PMS1P54277 932 aaKnown RBP4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 GJA9P57773 515 aa4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 ZC3H6P61129 1189 aaKnown RBP4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 AXDND1Q5T1B0 1012 aaPredicted RBP4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 UNC5AQ6ZN44 842 aa4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 CCDC81Q6ZN84 652 aa4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 TM9SF2Q99805 663 aa4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 DSCC1Q9BVC3 393 aa4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 AP5S1Q9NUS5 200 aa4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 ERVK13-1Q9NX77 482 aa4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 TNFRSF10DQ9UBN6 386 aa4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 GPR55Q9Y2T6 319 aaPredicted RBP4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 DUSP10Q9Y6W6 482 aa4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 PPFIA2O75334 1257 aa4.63□□□□□ -1.67
DEPDC1-204ENST00000489862 MPOP05164 745 aa4.63□□□□□ -1.67
DEPDC1-204ENST00000489862 PAK2Q13177 524 aa4.63□□□□□ -1.67
DEPDC1-204ENST00000489862 CSRP2Q16527 193 aa4.63□□□□□ -1.67
DEPDC1-204ENST00000489862 HSF5Q4G112 596 aaPredicted RBP4.63□□□□□ -1.67
DEPDC1-204ENST00000489862 METTL16Q86W50 562 aaKnown RBP4.63□□□□□ -1.67
DEPDC1-204ENST00000489862 TAB3Q8N5C8 712 aaPredicted RBP4.63□□□□□ -1.67
DEPDC1-204ENST00000489862 TMEM52Q8NDY8 209 aa4.63□□□□□ -1.67
DEPDC1-204ENST00000489862 BRF1Q92994 677 aa4.63□□□□□ -1.67
DEPDC1-204ENST00000489862 LNPKQ9C0E8 428 aa4.63□□□□□ -1.67
DEPDC1-204ENST00000489862 GINM1Q9NU53 330 aa4.63□□□□□ -1.67
DEPDC1-204ENST00000489862 H0Y8X5 98 aa4.62□□□□□ -1.67
DEPDC1-204ENST00000489862 SCAMP3O14828 347 aaKnown RBP4.62□□□□□ -1.67
DEPDC1-204ENST00000489862 PNLIPP16233 465 aa4.62□□□□□ -1.67
DEPDC1-204ENST00000489862 PFKLP17858 780 aa4.62□□□□□ -1.67
DEPDC1-204ENST00000489862 GUCY2CP25092 1073 aa4.62□□□□□ -1.67
DEPDC1-204ENST00000489862 RTP2Q5QGT7 225 aa4.62□□□□□ -1.67
DEPDC1-204ENST00000489862 DPH6Q7L8W6 267 aa4.62□□□□□ -1.67
DEPDC1-204ENST00000489862 CERS3Q8IU89 383 aa4.62□□□□□ -1.67
DEPDC1-204ENST00000489862 ZNF654Q8IZM8 581 aa4.62□□□□□ -1.67
DEPDC1-204ENST00000489862 RBBP8NLQ8NC74 664 aaPredicted RBP4.62□□□□□ -1.67
DEPDC1-204ENST00000489862 UBXN4Q92575 508 aa4.62□□□□□ -1.67
DEPDC1-204ENST00000489862 PRR13Q9NZ81 148 aa4.62□□□□□ -1.67
DEPDC1-204ENST00000489862 PCDHA5Q9Y5H7 936 aa4.62□□□□□ -1.67
DEPDC1-204ENST00000489862 ANKRD62A6NC57 917 aa4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 WTIPA6NIX2 430 aaPredicted RBP4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 AMHP03971 560 aa4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 GSNP06396 782 aa4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 GSTM1P09488 218 aa4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 PRKCAP17252 672 aa4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 VAMP1P23763 118 aa4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 ZNF445P59923 1031 aa4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 ANKRD39Q53RE8 183 aa4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 NOL9Q5SY16 702 aaKnown RBP4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 LRCH2Q5VUJ6 765 aa4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 GALNT18Q6P9A2 607 aa4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 SLCO6A1Q86UG4 719 aa4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 SLC12A9Q9BXP2 914 aa4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 GP6Q9HCN6 339 aa4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 ING1Q9UK53 422 aaPredicted RBP4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 EFR3BQ9Y2G0 817 aa4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 ZNF451Q9Y4E5 1061 aa4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 TAF6LQ9Y6J9 622 aa4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 LTBP3Q9NS15 1303 aa4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 PCSK5Q92824 1860 aa4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 PLATP00750 562 aa4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 CD247P20963 164 aa4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 HDLBPQ00341 1268 aaKnown RBP4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 FHL2Q14192 279 aa4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 TMC6Q7Z403 805 aa4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 NUP43Q8NFH3 380 aa4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 SMARCC1Q92922 1105 aaPredicted RBP4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 JMJD8Q96S16 334 aa4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 DNAJC2Q99543 621 aaKnown RBP4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 HIRIP3Q9BW71 556 aaPredicted RBP4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 SUSD2Q9UGT4 822 aa4.61□□□□□ -1.67
DEPDC1-204ENST00000489862 A0A1W2PQ45 241 aaPredicted RBP4.6□□□□□ -1.67
DEPDC1-204ENST00000489862 A0A1W2PQY0 241 aa4.6□□□□□ -1.67
DEPDC1-204ENST00000489862 NOBOXO60393 691 aa4.6□□□□□ -1.67
DEPDC1-204ENST00000489862 ENDOUP21128 410 aaKnown RBP4.6□□□□□ -1.67
DEPDC1-204ENST00000489862 ERVFRD-1P60508 538 aa4.6□□□□□ -1.67
DEPDC1-204ENST00000489862 CWF19L1Q69YN2 538 aaKnown RBP4.6□□□□□ -1.67
DEPDC1-204ENST00000489862 FIBCD1Q8N539 461 aa4.6□□□□□ -1.67
DEPDC1-204ENST00000489862 GPATCH3Q96I76 525 aa4.6□□□□□ -1.67
DEPDC1-204ENST00000489862 CRBNQ96SW2 442 aa4.6□□□□□ -1.67
DEPDC1-204ENST00000489862 KLHL14Q9P2G3 628 aa4.6□□□□□ -1.67
DEPDC1-204ENST00000489862 IMPACTQ9P2X3 320 aa4.6□□□□□ -1.67
DEPDC1-204ENST00000489862 ACSL6Q9UKU0 697 aa4.6□□□□□ -1.67
DEPDC1-204ENST00000489862 ZNF214Q9UL59 606 aaPredicted RBP4.6□□□□□ -1.67
DEPDC1-204ENST00000489862 CBFA2T2O43439 604 aa4.59□□□□□ -1.67
DEPDC1-204ENST00000489862 SOX9P48436 509 aa4.59□□□□□ -1.67
DEPDC1-204ENST00000489862 CYP4F8P98187 520 aa4.59□□□□□ -1.67
DEPDC1-204ENST00000489862 NT5DC4Q86YG4 428 aa4.59□□□□□ -1.67
DEPDC1-204ENST00000489862 NAT16Q8N8M0 369 aa4.59□□□□□ -1.67
DEPDC1-204ENST00000489862 FCRL3Q96P31 734 aaPredicted RBP4.59□□□□□ -1.67
DEPDC1-204ENST00000489862 NOL6Q9H6R4 1146 aaKnown RBP4.59□□□□□ -1.67
DEPDC1-204ENST00000489862 PCDHB10Q9UN67 800 aa4.59□□□□□ -1.67
DEPDC1-204ENST00000489862 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.59□□□□□ -1.67
DEPDC1-204ENST00000489862 FHOD1Q9Y613 1164 aa4.59□□□□□ -1.67
DEPDC1-204ENST00000489862 NUDT19A8MXV4 375 aa4.58□□□□□ -1.68
DEPDC1-204ENST00000489862 MSL3P1P0C860 447 aa4.58□□□□□ -1.68
DEPDC1-204ENST00000489862 FBLN1P23142 703 aa4.58□□□□□ -1.68
DEPDC1-204ENST00000489862 ERCC5P28715 1186 aaPredicted RBP4.58□□□□□ -1.68
DEPDC1-204ENST00000489862 ARL4AP40617 200 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms