RNA–Protein interactions for RNA: ENST00000489551.5

CSF3R-213, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best)

Gene CSF3R, Length 787 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-213ENST00000489551 CCPG1Q9ULG6 757 aa11.91□□□□□ -0.5
CSF3R-213ENST00000489551 NCOR1O75376 2440 aa11.91□□□□□ -0.5
CSF3R-213ENST00000489551 FRMPD2Q68DX3 1309 aaPredicted RBP11.9□□□□□ -0.5
CSF3R-213ENST00000489551 RBM47A0AV96 593 aaKnown RBP11.9□□□□□ -0.5
CSF3R-213ENST00000489551 CABYRO75952 493 aa11.9□□□□□ -0.5
CSF3R-213ENST00000489551 MYOGP15173 224 aa11.9□□□□□ -0.5
CSF3R-213ENST00000489551 ALDH5A1P51649 535 aaPredicted RBP11.9□□□□□ -0.5
CSF3R-213ENST00000489551 PDE1AP54750 535 aa11.9□□□□□ -0.5
CSF3R-213ENST00000489551 DUSP28Q4G0W2 176 aa11.9□□□□□ -0.5
CSF3R-213ENST00000489551 ANKRD45Q5TZF3 282 aa11.9□□□□□ -0.5
CSF3R-213ENST00000489551 PSRC1Q6PGN9 363 aaPredicted RBP11.9□□□□□ -0.5
CSF3R-213ENST00000489551 SLC30A10Q6XR72 485 aa11.9□□□□□ -0.5
CSF3R-213ENST00000489551 KIAA1211Q6ZU35 1233 aa11.9□□□□□ -0.5
CSF3R-213ENST00000489551 OTOP2Q7RTS6 562 aa11.9□□□□□ -0.5
CSF3R-213ENST00000489551 DCAF4Q8WV16 495 aa11.9□□□□□ -0.5
CSF3R-213ENST00000489551 SCLYQ96I15 445 aa11.9□□□□□ -0.5
CSF3R-213ENST00000489551 NKX2-4Q9H2Z4 354 aa11.9□□□□□ -0.5
CSF3R-213ENST00000489551 GPCPD1Q9NPB8 672 aa11.9□□□□□ -0.5
CSF3R-213ENST00000489551 Q9Y3F1 56 aa11.9□□□□□ -0.5
CSF3R-213ENST00000489551 PRRC2BQ5JSZ5 2229 aaKnown RBP11.9□□□□□ -0.51
CSF3R-213ENST00000489551 FGBP02675 491 aa11.89□□□□□ -0.51
CSF3R-213ENST00000489551 HSPD1P10809 573 aaKnown RBP11.89□□□□□ -0.51
CSF3R-213ENST00000489551 RABGGTBP53611 331 aa11.89□□□□□ -0.51
CSF3R-213ENST00000489551 CCDC96Q2M329 555 aa11.89□□□□□ -0.51
CSF3R-213ENST00000489551 SYDE2Q5VT97 1194 aa11.89□□□□□ -0.51
CSF3R-213ENST00000489551 PPM1EQ8WY54 764 aa11.89□□□□□ -0.51
CSF3R-213ENST00000489551 EVI5LQ96CN4 794 aa11.89□□□□□ -0.51
CSF3R-213ENST00000489551 AP5M1Q9H0R1 490 aa11.89□□□□□ -0.51
CSF3R-213ENST00000489551 ALDH8A1Q9H2A2 487 aaPredicted RBP11.89□□□□□ -0.51
CSF3R-213ENST00000489551 VTA1Q9NP79 307 aa11.89□□□□□ -0.51
CSF3R-213ENST00000489551 HELLSQ9NRZ9 838 aa11.89□□□□□ -0.51
CSF3R-213ENST00000489551 TCP11L1Q9NUJ3 509 aa11.89□□□□□ -0.51
CSF3R-213ENST00000489551 TRMT13Q9NUP7 481 aaKnown RBP11.89□□□□□ -0.51
CSF3R-213ENST00000489551 SNHG28P0DPA3 235 aa11.88□□□□□ -0.51
CSF3R-213ENST00000489551 PDHBP11177 359 aa11.88□□□□□ -0.51
CSF3R-213ENST00000489551 TOP1P11387 765 aaKnown RBP11.88□□□□□ -0.51
CSF3R-213ENST00000489551 CYP2C9P11712 490 aa11.88□□□□□ -0.51
CSF3R-213ENST00000489551 HAND2P61296 217 aa11.88□□□□□ -0.51
CSF3R-213ENST00000489551 PURAQ00577 322 aaKnown RBP11.88□□□□□ -0.51
CSF3R-213ENST00000489551 NMIQ13287 307 aaPredicted RBP11.88□□□□□ -0.51
CSF3R-213ENST00000489551 PPP4R3BQ5MIZ7 849 aa11.88□□□□□ -0.51
CSF3R-213ENST00000489551 TBC1D10CQ8IV04 446 aa11.88□□□□□ -0.51
CSF3R-213ENST00000489551 COPS5Q92905 334 aa11.88□□□□□ -0.51
CSF3R-213ENST00000489551 CRBNQ96SW2 442 aa11.88□□□□□ -0.51
CSF3R-213ENST00000489551 WDR11Q9BZH6 1224 aa11.88□□□□□ -0.51
CSF3R-213ENST00000489551 CPVLQ9H3G5 476 aa11.88□□□□□ -0.51
CSF3R-213ENST00000489551 EDNRBP24530 442 aa11.87□□□□□ -0.51
CSF3R-213ENST00000489551 RRP1P56182 461 aaKnown RBP11.87□□□□□ -0.51
CSF3R-213ENST00000489551 TTLL4Q14679 1199 aa11.87□□□□□ -0.51
CSF3R-213ENST00000489551 CCDC85BQ15834 202 aaPredicted RBP11.87□□□□□ -0.51
CSF3R-213ENST00000489551 MCMDC2Q4G0Z9 681 aa11.87□□□□□ -0.51
CSF3R-213ENST00000489551 TJAP1Q5JTD0 557 aa11.87□□□□□ -0.51
CSF3R-213ENST00000489551 RRP12Q5JTH9 1297 aaKnown RBP11.87□□□□□ -0.51
CSF3R-213ENST00000489551 TBC1D5Q92609 795 aa11.87□□□□□ -0.51
CSF3R-213ENST00000489551 GAS2L1Q99501 681 aaPredicted RBP11.87□□□□□ -0.51
CSF3R-213ENST00000489551 ZMYM6O95789 1325 aa11.86□□□□□ -0.51
CSF3R-213ENST00000489551 PTPDC1A2A3K4 754 aa11.86□□□□□ -0.51
CSF3R-213ENST00000489551 ZEB2O60315 1214 aa11.86□□□□□ -0.51
CSF3R-213ENST00000489551 ARHGEF15O94989 841 aa11.86□□□□□ -0.51
CSF3R-213ENST00000489551 ARIH2O95376 493 aa11.86□□□□□ -0.51
CSF3R-213ENST00000489551 MYL3P08590 195 aa11.86□□□□□ -0.51
CSF3R-213ENST00000489551 CALML3P27482 149 aa11.86□□□□□ -0.51
CSF3R-213ENST00000489551 RPS6P62753 249 aaKnown RBP11.86□□□□□ -0.51
CSF3R-213ENST00000489551 ZNF543Q08ER8 600 aa11.86□□□□□ -0.51
CSF3R-213ENST00000489551 RAB30Q15771 203 aa11.86□□□□□ -0.51
CSF3R-213ENST00000489551 NBPF20Q3BBV1 942 aa11.86□□□□□ -0.51
CSF3R-213ENST00000489551 AKNAD1Q5T1N1 836 aa11.86□□□□□ -0.51
CSF3R-213ENST00000489551 CTAGE1Q96RT6 745 aa11.86□□□□□ -0.51
CSF3R-213ENST00000489551 TOMM22Q9NS69 142 aa11.86□□□□□ -0.51
CSF3R-213ENST00000489551 BAZ2BQ9UIF8 2168 aaKnown RBP11.86□□□□□ -0.51
CSF3R-213ENST00000489551 TNKSO95271 1327 aa11.86□□□□□ -0.51
CSF3R-213ENST00000489551 NEDD4P46934 1319 aa11.86□□□□□ -0.51
CSF3R-213ENST00000489551 COL4A4P53420 1690 aaPredicted RBP11.85□□□□□ -0.51
CSF3R-213ENST00000489551 BDP1A6H8Y1 2624 aa11.85□□□□□ -0.51
CSF3R-213ENST00000489551 RFXAPO00287 272 aa11.85□□□□□ -0.51
CSF3R-213ENST00000489551 GOLGA8HP0CJ92 632 aa11.85□□□□□ -0.51
CSF3R-213ENST00000489551 HDAC1Q13547 482 aaPredicted RBP11.85□□□□□ -0.51
CSF3R-213ENST00000489551 RNF207Q6ZRF8 634 aa11.85□□□□□ -0.51
CSF3R-213ENST00000489551 OR6J1Q8NGC5 347 aa11.85□□□□□ -0.51
CSF3R-213ENST00000489551 SYMPKQ92797 1274 aaKnown RBP11.85□□□□□ -0.51
CSF3R-213ENST00000489551 ZKSCAN3Q9BRR0 538 aa11.85□□□□□ -0.51
CSF3R-213ENST00000489551 SEZ6LQ9BYH1 1024 aa11.85□□□□□ -0.51
CSF3R-213ENST00000489551 UBA5Q9GZZ9 404 aa11.85□□□□□ -0.51
CSF3R-213ENST00000489551 COL20A1Q9P218 1284 aa11.85□□□□□ -0.51
CSF3R-213ENST00000489551 ADD3Q9UEY8 706 aaKnown RBP11.85□□□□□ -0.51
CSF3R-213ENST00000489551 MSRAQ9UJ68 235 aa11.85□□□□□ -0.51
CSF3R-213ENST00000489551 DOCK5Q9H7D0 1870 aa11.85□□□□□ -0.51
CSF3R-213ENST00000489551 CCDC171Q6TFL3 1326 aa11.85□□□□□ -0.51
CSF3R-213ENST00000489551 WDR19Q8NEZ3 1342 aa11.85□□□□□ -0.51
CSF3R-213ENST00000489551 LOC102724159A0A0B4J2E5 919 aa11.84□□□□□ -0.51
CSF3R-213ENST00000489551 EPOPA6NHQ4 379 aa11.84□□□□□ -0.51
CSF3R-213ENST00000489551 A6NJR5 290 aa11.84□□□□□ -0.51
CSF3R-213ENST00000489551 IGFBP4P22692 258 aa11.84□□□□□ -0.51
CSF3R-213ENST00000489551 GPNMBQ14956 572 aa11.84□□□□□ -0.51
CSF3R-213ENST00000489551 PWP2Q15269 919 aaKnown RBP11.84□□□□□ -0.51
CSF3R-213ENST00000489551 SPRED2Q7Z698 418 aa11.84□□□□□ -0.51
CSF3R-213ENST00000489551 DEFB128Q7Z7B8 93 aa11.84□□□□□ -0.51
CSF3R-213ENST00000489551 TTC14Q96N46 770 aa11.84□□□□□ -0.51
CSF3R-213ENST00000489551 ASB2Q96Q27 587 aa11.84□□□□□ -0.51
CSF3R-213ENST00000489551 MTG1Q9BT17 334 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms