RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 TBC1D10CQ8IV04 446 aa15.73■□□□□ 0.11
LINC00173-204ENST00000489452 SLC43A3Q8NBI5 491 aa15.73■□□□□ 0.11
LINC00173-204ENST00000489452 TIFAQ96CG3 184 aa15.73■□□□□ 0.11
LINC00173-204ENST00000489452 UBA5Q9GZZ9 404 aa15.73■□□□□ 0.11
LINC00173-204ENST00000489452 CPVLQ9H3G5 476 aa15.73■□□□□ 0.11
LINC00173-204ENST00000489452 HIPK3Q9H422 1215 aa15.73■□□□□ 0.11
LINC00173-204ENST00000489452 RWDD1Q9H446 243 aaPredicted RBP15.73■□□□□ 0.11
LINC00173-204ENST00000489452 ZNF576Q9H609 170 aa15.73■□□□□ 0.11
LINC00173-204ENST00000489452 IL23AQ9NPF7 189 aa15.73■□□□□ 0.11
LINC00173-204ENST00000489452 FGBP02675 491 aa15.72■□□□□ 0.11
LINC00173-204ENST00000489452 MYL3P08590 195 aa15.72■□□□□ 0.11
LINC00173-204ENST00000489452 SDSP20132 328 aa15.72■□□□□ 0.11
LINC00173-204ENST00000489452 ZNF543Q08ER8 600 aa15.72■□□□□ 0.11
LINC00173-204ENST00000489452 DUSP28Q4G0W2 176 aa15.72■□□□□ 0.11
LINC00173-204ENST00000489452 SLC30A10Q6XR72 485 aa15.72■□□□□ 0.11
LINC00173-204ENST00000489452 RNF207Q6ZRF8 634 aa15.72■□□□□ 0.11
LINC00173-204ENST00000489452 PPP1R13LQ8WUF5 828 aa15.72■□□□□ 0.11
LINC00173-204ENST00000489452 CLEC4DQ8WXI8 215 aa15.72■□□□□ 0.11
LINC00173-204ENST00000489452 TTC14Q96N46 770 aa15.72■□□□□ 0.11
LINC00173-204ENST00000489452 Q9Y3F1 56 aa15.72■□□□□ 0.11
LINC00173-204ENST00000489452 TMEM265A0A087WTH1 108 aa15.71■□□□□ 0.11
LINC00173-204ENST00000489452 ZNF213O14771 459 aa15.71■□□□□ 0.11
LINC00173-204ENST00000489452 B4GALT4O60513 344 aa15.71■□□□□ 0.11
LINC00173-204ENST00000489452 IGHDP01880 384 aa15.71■□□□□ 0.11
LINC00173-204ENST00000489452 RPS6P62753 249 aaKnown RBP15.71■□□□□ 0.11
LINC00173-204ENST00000489452 PDE4DQ08499 809 aa15.71■□□□□ 0.11
LINC00173-204ENST00000489452 USH1GQ495M9 461 aa15.71■□□□□ 0.11
LINC00173-204ENST00000489452 PSRC1Q6PGN9 363 aaPredicted RBP15.71■□□□□ 0.11
LINC00173-204ENST00000489452 CWC27Q6UX04 472 aaKnown RBP15.71■□□□□ 0.11
LINC00173-204ENST00000489452 OTOP2Q7RTS6 562 aa15.71■□□□□ 0.11
LINC00173-204ENST00000489452 CHD1LQ86WJ1 897 aa15.71■□□□□ 0.11
LINC00173-204ENST00000489452 PLEKHM2Q8IWE5 1019 aa15.71■□□□□ 0.11
LINC00173-204ENST00000489452 MORC4Q8TE76 937 aa15.71■□□□□ 0.11
LINC00173-204ENST00000489452 PPM1EQ8WY54 764 aa15.71■□□□□ 0.11
LINC00173-204ENST00000489452 PBX4Q9BYU1 374 aa15.71■□□□□ 0.11
LINC00173-204ENST00000489452 CXXC1Q9P0U4 656 aaPredicted RBP15.71■□□□□ 0.11
LINC00173-204ENST00000489452 TTC28Q96AY4 2481 aa15.7■□□□□ 0.1
LINC00173-204ENST00000489452 MFAP1P55081 439 aaKnown RBP15.7■□□□□ 0.1
LINC00173-204ENST00000489452 CHMP4BP1P59074 171 aa15.7■□□□□ 0.1
LINC00173-204ENST00000489452 OR6J1Q8NGC5 347 aa15.7■□□□□ 0.1
LINC00173-204ENST00000489452 ESR2Q92731 530 aa15.7■□□□□ 0.1
LINC00173-204ENST00000489452 NOC4LQ9BVI4 516 aaKnown RBP15.7■□□□□ 0.1
LINC00173-204ENST00000489452 RNF41Q9H4P4 317 aaPredicted RBP15.7■□□□□ 0.1
LINC00173-204ENST00000489452 GPHNQ9NQX3 736 aaPredicted RBP15.7■□□□□ 0.1
LINC00173-204ENST00000489452 TRMT13Q9NUP7 481 aaKnown RBP15.7■□□□□ 0.1
LINC00173-204ENST00000489452 NEDD4P46934 1319 aa15.69■□□□□ 0.1
LINC00173-204ENST00000489452 KDM4AO75164 1064 aa15.69■□□□□ 0.1
LINC00173-204ENST00000489452 CYP2C9P11712 490 aa15.69■□□□□ 0.1
LINC00173-204ENST00000489452 RASIP1Q5U651 963 aa15.69■□□□□ 0.1
LINC00173-204ENST00000489452 TICAM2Q86XR7 235 aa15.69■□□□□ 0.1
LINC00173-204ENST00000489452 SMC5Q8IY18 1101 aa15.69■□□□□ 0.1
LINC00173-204ENST00000489452 HERVK_113Q902F9 699 aa15.69■□□□□ 0.1
LINC00173-204ENST00000489452 TBC1D5Q92609 795 aa15.69■□□□□ 0.1
LINC00173-204ENST00000489452 COPS5Q92905 334 aa15.69■□□□□ 0.1
LINC00173-204ENST00000489452 SCLYQ96I15 445 aa15.69■□□□□ 0.1
LINC00173-204ENST00000489452 ALDH8A1Q9H2A2 487 aaPredicted RBP15.69■□□□□ 0.1
LINC00173-204ENST00000489452 PRDM12Q9H4Q4 367 aa15.69■□□□□ 0.1
LINC00173-204ENST00000489452 VAT1LQ9HCJ6 419 aa15.69■□□□□ 0.1
LINC00173-204ENST00000489452 DIAPH3Q9NSV4 1193 aa15.69■□□□□ 0.1
LINC00173-204ENST00000489452 POLR3EQ9NVU0 708 aa15.69■□□□□ 0.1
LINC00173-204ENST00000489452 MSRAQ9UJ68 235 aa15.69■□□□□ 0.1
LINC00173-204ENST00000489452 SPTBN5Q9NRC6 3674 aaKnown RBP15.69■□□□□ 0.1
LINC00173-204ENST00000489452 ZMYM6O95789 1325 aa15.68■□□□□ 0.1
LINC00173-204ENST00000489452 CHD7Q9P2D1 2997 aa15.68■□□□□ 0.1
LINC00173-204ENST00000489452 RBM47A0AV96 593 aaKnown RBP15.68■□□□□ 0.1
LINC00173-204ENST00000489452 SNHG28P0DPA3 235 aa15.68■□□□□ 0.1
LINC00173-204ENST00000489452 PCP11498 1178 aaKnown RBP15.68■□□□□ 0.1
LINC00173-204ENST00000489452 CPT1AP50416 773 aa15.68■□□□□ 0.1
LINC00173-204ENST00000489452 FAM47CQ5HY64 1035 aa15.68■□□□□ 0.1
LINC00173-204ENST00000489452 USP38Q8NB14 1042 aa15.68■□□□□ 0.1
LINC00173-204ENST00000489452 EXOC6Q8TAG9 804 aa15.68■□□□□ 0.1
LINC00173-204ENST00000489452 WNT8AQ9H1J5 351 aa15.68■□□□□ 0.1
LINC00173-204ENST00000489452 ZBBXA8MT70 800 aa15.67■□□□□ 0.1
LINC00173-204ENST00000489452 B4E1Z4 1266 aa15.67■□□□□ 0.1
LINC00173-204ENST00000489452 TXNP10599 105 aaKnown RBP15.67■□□□□ 0.1
LINC00173-204ENST00000489452 RABGGTBP53611 331 aa15.67■□□□□ 0.1
LINC00173-204ENST00000489452 PURAQ00577 322 aaKnown RBP15.67■□□□□ 0.1
LINC00173-204ENST00000489452 NUCB1Q02818 461 aa15.67■□□□□ 0.1
LINC00173-204ENST00000489452 PPP2R5BQ15173 497 aa15.67■□□□□ 0.1
LINC00173-204ENST00000489452 NBPF20Q3BBV1 942 aa15.67■□□□□ 0.1
LINC00173-204ENST00000489452 BRDTQ58F21 947 aaPredicted RBP15.67■□□□□ 0.1
LINC00173-204ENST00000489452 GPATCH4Q5T3I0 446 aaKnown RBP15.67■□□□□ 0.1
LINC00173-204ENST00000489452 IQCA1Q86XH1 822 aa15.67■□□□□ 0.1
LINC00173-204ENST00000489452 DGKHQ86XP1 1220 aa15.67■□□□□ 0.1
LINC00173-204ENST00000489452 RPUSD2Q8IZ73 545 aaKnown RBP15.67■□□□□ 0.1
LINC00173-204ENST00000489452 PNMA1Q8ND90 353 aa15.67■□□□□ 0.1
LINC00173-204ENST00000489452 MPHOSPH6Q99547 160 aaKnown RBP15.67■□□□□ 0.1
LINC00173-204ENST00000489452 MTG1Q9BT17 334 aaPredicted RBP15.67■□□□□ 0.1
LINC00173-204ENST00000489452 SEZ6LQ9BYH1 1024 aa15.67■□□□□ 0.1
LINC00173-204ENST00000489452 MTIF3Q9H2K0 278 aaKnown RBP15.67■□□□□ 0.1
LINC00173-204ENST00000489452 NKX2-4Q9H2Z4 354 aa15.67■□□□□ 0.1
LINC00173-204ENST00000489452 KAT14Q9H8E8 782 aa15.67■□□□□ 0.1
LINC00173-204ENST00000489452 PNMA2Q9UL42 364 aa15.67■□□□□ 0.1
LINC00173-204ENST00000489452 TNKSO95271 1327 aa15.67■□□□□ 0.1
LINC00173-204ENST00000489452 LOC102724159A0A0B4J2E5 919 aa15.66■□□□□ 0.1
LINC00173-204ENST00000489452 DHX16O60231 1041 aaKnown RBP15.66■□□□□ 0.1
LINC00173-204ENST00000489452 IGFBP4P22692 258 aa15.66■□□□□ 0.1
LINC00173-204ENST00000489452 PWP2Q15269 919 aaKnown RBP15.66■□□□□ 0.1
LINC00173-204ENST00000489452 CCDC85BQ15834 202 aaPredicted RBP15.66■□□□□ 0.1
LINC00173-204ENST00000489452 DEFB128Q7Z7B8 93 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms