RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 MNX1P50219 401 aaPredicted RBP15.52■□□□□ 0.08
CCL28-202ENST00000489442 EXOSC10Q01780 885 aaKnown RBP15.52■□□□□ 0.08
CCL28-202ENST00000489442 CCDC144BQ3MJ40 725 aa15.52■□□□□ 0.08
CCL28-202ENST00000489442 EEPD1Q7L9B9 569 aa15.52■□□□□ 0.08
CCL28-202ENST00000489442 MAF1Q9H063 256 aa15.52■□□□□ 0.08
CCL28-202ENST00000489442 SPC25Q9HBM1 224 aa15.52■□□□□ 0.08
CCL28-202ENST00000489442 NAP1L2Q9ULW6 460 aaPredicted RBP15.52■□□□□ 0.08
CCL28-202ENST00000489442 PNMA6FA0A0J9YX94 578 aa15.51■□□□□ 0.07
CCL28-202ENST00000489442 PGK1P00558 417 aa15.51■□□□□ 0.07
CCL28-202ENST00000489442 CFBP00751 764 aa15.51■□□□□ 0.07
CCL28-202ENST00000489442 PSMA5P28066 241 aa15.51■□□□□ 0.07
CCL28-202ENST00000489442 ALDH5A1P51649 535 aaPredicted RBP15.51■□□□□ 0.07
CCL28-202ENST00000489442 LRRC41Q15345 812 aa15.51■□□□□ 0.07
CCL28-202ENST00000489442 BLOC1S2Q6QNY1 142 aa15.51■□□□□ 0.07
CCL28-202ENST00000489442 MICU3Q86XE3 530 aa15.51■□□□□ 0.07
CCL28-202ENST00000489442 RAB11FIP4Q86YS3 637 aa15.51■□□□□ 0.07
CCL28-202ENST00000489442 DNERQ8NFT8 737 aa15.51■□□□□ 0.07
CCL28-202ENST00000489442 MTMR8Q96EF0 704 aa15.51■□□□□ 0.07
CCL28-202ENST00000489442 RRP36Q96EU6 259 aaKnown RBP15.51■□□□□ 0.07
CCL28-202ENST00000489442 SEC63Q9UGP8 760 aaKnown RBP15.51■□□□□ 0.07
CCL28-202ENST00000489442 SNX14Q9Y5W7 946 aa15.51■□□□□ 0.07
CCL28-202ENST00000489442 LOC102724159A0A0B4J2E5 919 aa15.5■□□□□ 0.07
CCL28-202ENST00000489442 EPB41L2O43491 1005 aaKnown RBP15.5■□□□□ 0.07
CCL28-202ENST00000489442 CYTH3O43739 400 aa15.5■□□□□ 0.07
CCL28-202ENST00000489442 DUSP11O75319 330 aaKnown RBP15.5■□□□□ 0.07
CCL28-202ENST00000489442 TNFAIP2Q03169 654 aa15.5■□□□□ 0.07
CCL28-202ENST00000489442 PDE4DQ08499 809 aa15.5■□□□□ 0.07
CCL28-202ENST00000489442 PWP2Q15269 919 aaKnown RBP15.5■□□□□ 0.07
CCL28-202ENST00000489442 SGMS1Q86VZ5 419 aa15.5■□□□□ 0.07
CCL28-202ENST00000489442 FANCBQ8NB91 859 aa15.5■□□□□ 0.07
CCL28-202ENST00000489442 TBC1D5Q92609 795 aa15.5■□□□□ 0.07
CCL28-202ENST00000489442 KCNB2Q92953 911 aa15.5■□□□□ 0.07
CCL28-202ENST00000489442 LENG1Q96BZ8 264 aaPredicted RBP15.5■□□□□ 0.07
CCL28-202ENST00000489442 SPZ1Q9BXG8 430 aa15.5■□□□□ 0.07
CCL28-202ENST00000489442 DDX49Q9Y6V7 483 aaKnown RBP15.5■□□□□ 0.07
CCL28-202ENST00000489442 ASTN1O14525 1302 aa15.5■□□□□ 0.07
CCL28-202ENST00000489442 ALPK3Q96L96 1907 aa15.5■□□□□ 0.07
CCL28-202ENST00000489442 ZBTB43O43298 467 aa15.49■□□□□ 0.07
CCL28-202ENST00000489442 COL6A1P12109 1028 aa15.49■□□□□ 0.07
CCL28-202ENST00000489442 CPA1P15085 419 aa15.49■□□□□ 0.07
CCL28-202ENST00000489442 SMARCA1P28370 1054 aa15.49■□□□□ 0.07
CCL28-202ENST00000489442 ADCYAP1R1P41586 468 aa15.49■□□□□ 0.07
CCL28-202ENST00000489442 ATN1P54259 1190 aaPredicted RBP15.49■□□□□ 0.07
CCL28-202ENST00000489442 APOA5Q6Q788 366 aa15.49■□□□□ 0.07
CCL28-202ENST00000489442 FBXO16Q8IX29 292 aaPredicted RBP15.49■□□□□ 0.07
CCL28-202ENST00000489442 CCDC82Q8N4S0 544 aa15.49■□□□□ 0.07
CCL28-202ENST00000489442 NSUN6Q8TEA1 469 aaKnown RBP15.49■□□□□ 0.07
CCL28-202ENST00000489442 USP26Q9BXU7 913 aa15.49■□□□□ 0.07
CCL28-202ENST00000489442 VTA1Q9NP79 307 aa15.49■□□□□ 0.07
CCL28-202ENST00000489442 KLF18A0A0U1RQI7 1052 aa15.48■□□□□ 0.07
CCL28-202ENST00000489442 H0YGN5 161 aa15.48■□□□□ 0.07
CCL28-202ENST00000489442 PPP1R11O60927 126 aaPredicted RBP15.48■□□□□ 0.07
CCL28-202ENST00000489442 PLEKHA8P1O95397 391 aa15.48■□□□□ 0.07
CCL28-202ENST00000489442 C6orf222P0C671 652 aaPredicted RBP15.48■□□□□ 0.07
CCL28-202ENST00000489442 CASTP20810 708 aaKnown RBP15.48■□□□□ 0.07
CCL28-202ENST00000489442 SLC35G1Q2M3R5 365 aa15.48■□□□□ 0.07
CCL28-202ENST00000489442 ARHGEF16Q5VV41 709 aa15.48■□□□□ 0.07
CCL28-202ENST00000489442 IQSEC1Q6DN90 963 aa15.48■□□□□ 0.07
CCL28-202ENST00000489442 Q6ZUG5 572 aa15.48■□□□□ 0.07
CCL28-202ENST00000489442 C7orf61Q8IZ16 206 aa15.48■□□□□ 0.07
CCL28-202ENST00000489442 CMTR1Q8N1G2 835 aaKnown RBP15.48■□□□□ 0.07
CCL28-202ENST00000489442 SYTL5Q8TDW5 730 aaPredicted RBP15.48■□□□□ 0.07
CCL28-202ENST00000489442 MORC4Q8TE76 937 aa15.48■□□□□ 0.07
CCL28-202ENST00000489442 FERMT2Q96AC1 680 aa15.48■□□□□ 0.07
CCL28-202ENST00000489442 TAAR1Q96RJ0 339 aa15.48■□□□□ 0.07
CCL28-202ENST00000489442 RMDN3Q96TC7 470 aa15.48■□□□□ 0.07
CCL28-202ENST00000489442 KATNBL1Q9H079 304 aa15.48■□□□□ 0.07
CCL28-202ENST00000489442 RBM28Q9NW13 759 aaKnown RBP15.48■□□□□ 0.07
CCL28-202ENST00000489442 SYNRGQ9UMZ2 1314 aa15.48■□□□□ 0.07
CCL28-202ENST00000489442 EIF5BO60841 1220 aaKnown RBP15.47■□□□□ 0.07
CCL28-202ENST00000489442 RTN1Q16799 776 aa15.47■□□□□ 0.07
CCL28-202ENST00000489442 SRBD1Q8N5C6 995 aaKnown RBP15.47■□□□□ 0.07
CCL28-202ENST00000489442 SAMD3Q8N6K7 520 aa15.47■□□□□ 0.07
CCL28-202ENST00000489442 AP5M1Q9H0R1 490 aa15.47■□□□□ 0.07
CCL28-202ENST00000489442 PDGFCQ9NRA1 345 aa15.47■□□□□ 0.07
CCL28-202ENST00000489442 MAP3K20Q9NYL2 800 aaKnown RBP15.47■□□□□ 0.07
CCL28-202ENST00000489442 BRPF3Q9ULD4 1205 aa15.47■□□□□ 0.07
CCL28-202ENST00000489442 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.46■□□□□ 0.07
CCL28-202ENST00000489442 GOLGA8AA7E2F4 631 aa15.46■□□□□ 0.07
CCL28-202ENST00000489442 GOLGA8BA8MQT2 603 aa15.46■□□□□ 0.07
CCL28-202ENST00000489442 GCOM1H8Y6P7 765 aaPredicted RBP15.46■□□□□ 0.07
CCL28-202ENST00000489442 ADAMTS4O75173 837 aa15.46■□□□□ 0.07
CCL28-202ENST00000489442 POLR2MP0CAP2 368 aa15.46■□□□□ 0.07
CCL28-202ENST00000489442 RPS6KB1P23443 525 aa15.46■□□□□ 0.07
CCL28-202ENST00000489442 LRRC26Q2I0M4 334 aa15.46■□□□□ 0.07
CCL28-202ENST00000489442 GNASQ5JWF2 1037 aa15.46■□□□□ 0.07
CCL28-202ENST00000489442 TAPT1Q6NXT6 567 aa15.46■□□□□ 0.07
CCL28-202ENST00000489442 TMTC3Q6ZXV5 915 aa15.46■□□□□ 0.07
CCL28-202ENST00000489442 PCSK9Q8NBP7 692 aaKnown RBP15.46■□□□□ 0.07
CCL28-202ENST00000489442 BRF1Q92994 677 aa15.46■□□□□ 0.07
CCL28-202ENST00000489442 IWS1Q96ST2 819 aa15.46■□□□□ 0.07
CCL28-202ENST00000489442 TSEN34Q9BSV6 310 aaKnown RBP15.46■□□□□ 0.07
CCL28-202ENST00000489442 WDR11Q9BZH6 1224 aa15.46■□□□□ 0.07
CCL28-202ENST00000489442 LRRC37A2A6NM11 1700 aa15.46■□□□□ 0.06
CCL28-202ENST00000489442 DYNC1LI2O43237 492 aaPredicted RBP15.45■□□□□ 0.06
CCL28-202ENST00000489442 ADCY6O43306 1168 aa15.45■□□□□ 0.06
CCL28-202ENST00000489442 SMPD1P17405 629 aa15.45■□□□□ 0.06
CCL28-202ENST00000489442 EIF2AK2P19525 551 aaKnown RBP15.45■□□□□ 0.06
CCL28-202ENST00000489442 HOXA13P31271 388 aaPredicted RBP15.45■□□□□ 0.06
CCL28-202ENST00000489442 HSD17B4P51659 736 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms