RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 CCDC194A0A1B0GVG4 234 aa17.3■□□□□ 0.36
CTNS-206ENST00000488623 CYP2C8P10632 490 aa17.3■□□□□ 0.36
CTNS-206ENST00000488623 STAT3P40763 770 aa17.3■□□□□ 0.36
CTNS-206ENST00000488623 KRT85P78386 507 aa17.3■□□□□ 0.36
CTNS-206ENST00000488623 CEBPZQ03701 1054 aaKnown RBP17.3■□□□□ 0.36
CTNS-206ENST00000488623 NFKBIBQ15653 356 aa17.3■□□□□ 0.36
CTNS-206ENST00000488623 SNRNP48Q6IEG0 339 aaKnown RBP17.3■□□□□ 0.36
CTNS-206ENST00000488623 ZIC5Q96T25 663 aa17.3■□□□□ 0.36
CTNS-206ENST00000488623 RTEL1Q9NZ71 1219 aa17.3■□□□□ 0.36
CTNS-206ENST00000488623 TSKSQ9UJT2 592 aa17.3■□□□□ 0.36
CTNS-206ENST00000488623 CFAP45Q9UL16 551 aa17.3■□□□□ 0.36
CTNS-206ENST00000488623 PNMA3Q9UL41 463 aa17.3■□□□□ 0.36
CTNS-206ENST00000488623 PIK3CDO00329 1044 aa17.29■□□□□ 0.36
CTNS-206ENST00000488623 NFIBO00712 420 aa17.29■□□□□ 0.36
CTNS-206ENST00000488623 WNT7AO00755 349 aa17.29■□□□□ 0.36
CTNS-206ENST00000488623 CFBP00751 764 aa17.29■□□□□ 0.36
CTNS-206ENST00000488623 ATP2B1P20020 1258 aa17.29■□□□□ 0.36
CTNS-206ENST00000488623 HOXA13P31271 388 aaPredicted RBP17.29■□□□□ 0.36
CTNS-206ENST00000488623 NBR1Q14596 966 aa17.29■□□□□ 0.36
CTNS-206ENST00000488623 PLS1Q14651 629 aa17.29■□□□□ 0.36
CTNS-206ENST00000488623 NONOQ15233 471 aaKnown RBP eCLIP17.29■□□□□ 0.36
CTNS-206ENST00000488623 TKFCQ3LXA3 575 aa17.29■□□□□ 0.36
CTNS-206ENST00000488623 RILPL1Q5EBL4 403 aa17.29■□□□□ 0.36
CTNS-206ENST00000488623 ANO1Q5XXA6 986 aa17.29■□□□□ 0.36
CTNS-206ENST00000488623 PGBD1Q96JS3 809 aa17.29■□□□□ 0.36
CTNS-206ENST00000488623 TEX13BQ9BXU2 312 aa17.29■□□□□ 0.36
CTNS-206ENST00000488623 TXNRD2Q9NNW7 524 aa17.29■□□□□ 0.36
CTNS-206ENST00000488623 HOMER2Q9NSB8 354 aa17.29■□□□□ 0.36
CTNS-206ENST00000488623 RCOR1Q9UKL0 485 aa17.29■□□□□ 0.36
CTNS-206ENST00000488623 PCDHB6Q9Y5E3 794 aa17.29■□□□□ 0.36
CTNS-206ENST00000488623 A0A0G2JMZ2 1700 aa17.29■□□□□ 0.36
CTNS-206ENST00000488623 GCOM1H8Y6P7 765 aaPredicted RBP17.28■□□□□ 0.36
CTNS-206ENST00000488623 FIBPO43427 364 aa17.28■□□□□ 0.36
CTNS-206ENST00000488623 EDIL3O43854 480 aa17.28■□□□□ 0.36
CTNS-206ENST00000488623 POLR2MP0CAP2 368 aa17.28■□□□□ 0.36
CTNS-206ENST00000488623 NASPP49321 788 aaPredicted RBP17.28■□□□□ 0.36
CTNS-206ENST00000488623 GHRHRQ02643 423 aa17.28■□□□□ 0.36
CTNS-206ENST00000488623 SF3A1Q15459 793 aaKnown RBP17.28■□□□□ 0.36
CTNS-206ENST00000488623 INF2Q27J81 1249 aa17.28■□□□□ 0.36
CTNS-206ENST00000488623 Q3C1V9 767 aa17.28■□□□□ 0.36
CTNS-206ENST00000488623 TEX2Q8IWB9 1127 aa17.28■□□□□ 0.36
CTNS-206ENST00000488623 PAGR1Q9BTK6 254 aa17.28■□□□□ 0.36
CTNS-206ENST00000488623 RNF146Q9NTX7 359 aa17.28■□□□□ 0.36
CTNS-206ENST00000488623 POLR3EQ9NVU0 708 aa17.28■□□□□ 0.36
CTNS-206ENST00000488623 NOL7Q9UMY1 257 aaKnown RBP17.28■□□□□ 0.36
CTNS-206ENST00000488623 RABGAP1Q9Y3P9 1069 aa17.28■□□□□ 0.36
CTNS-206ENST00000488623 IGF2BP3O00425 579 aaKnown RBP eCLIP17.27■□□□□ 0.36
CTNS-206ENST00000488623 CA12O43570 354 aa17.27■□□□□ 0.36
CTNS-206ENST00000488623 PRPF40AO75400 957 aaKnown RBP17.27■□□□□ 0.36
CTNS-206ENST00000488623 TRAPPC10P48553 1259 aa17.27■□□□□ 0.36
CTNS-206ENST00000488623 HSD17B4P51659 736 aa17.27■□□□□ 0.36
CTNS-206ENST00000488623 CACNB1Q02641 598 aaPredicted RBP17.27■□□□□ 0.36
CTNS-206ENST00000488623 PTPAQ15257 358 aa17.27■□□□□ 0.36
CTNS-206ENST00000488623 MCTP2Q6DN12 878 aa17.27■□□□□ 0.36
CTNS-206ENST00000488623 MCF2L2Q86YR7 1114 aa17.27■□□□□ 0.36
CTNS-206ENST00000488623 RIOX2Q8IUF8 465 aa17.27■□□□□ 0.36
CTNS-206ENST00000488623 SAMD3Q8N6K7 520 aa17.27■□□□□ 0.36
CTNS-206ENST00000488623 TMEM87AQ8NBN3 555 aa17.27■□□□□ 0.36
CTNS-206ENST00000488623 LINC00301Q8NCQ3 95 aa17.27■□□□□ 0.36
CTNS-206ENST00000488623 TBCKQ8TEA7 893 aa17.27■□□□□ 0.36
CTNS-206ENST00000488623 LEO1Q8WVC0 666 aaPredicted RBP17.27■□□□□ 0.36
CTNS-206ENST00000488623 SPATA32Q96LK8 384 aa17.27■□□□□ 0.36
CTNS-206ENST00000488623 SCAND2PQ9GZW5 306 aaPredicted RBP17.27■□□□□ 0.36
CTNS-206ENST00000488623 SPATC1LQ9H0A9 340 aa17.27■□□□□ 0.36
CTNS-206ENST00000488623 LMBRD1Q9NUN5 540 aa17.27■□□□□ 0.36
CTNS-206ENST00000488623 FOSP01100 380 aaPredicted RBP17.26■□□□□ 0.35
CTNS-206ENST00000488623 INHBEP58166 350 aa17.26■□□□□ 0.35
CTNS-206ENST00000488623 AP3B2Q13367 1082 aa17.26■□□□□ 0.35
CTNS-206ENST00000488623 ZNF174Q15697 407 aa17.26■□□□□ 0.35
CTNS-206ENST00000488623 TTC38Q5R3I4 469 aa17.26■□□□□ 0.35
CTNS-206ENST00000488623 FCHSD1Q86WN1 690 aa17.26■□□□□ 0.35
CTNS-206ENST00000488623 IFNL1Q8IU54 200 aa17.26■□□□□ 0.35
CTNS-206ENST00000488623 GTF3C2Q8WUA4 911 aaPredicted RBP17.26■□□□□ 0.35
CTNS-206ENST00000488623 MOV10L1Q9BXT6 1211 aaKnown RBP17.26■□□□□ 0.35
CTNS-206ENST00000488623 ANO3Q9BYT9 981 aa17.26■□□□□ 0.35
CTNS-206ENST00000488623 R3HDMLQ9H3Y0 253 aa17.26■□□□□ 0.35
CTNS-206ENST00000488623 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.26■□□□□ 0.35
CTNS-206ENST00000488623 MAP3K20Q9NYL2 800 aaKnown RBP17.26■□□□□ 0.35
CTNS-206ENST00000488623 MYH7BA7E2Y1 1941 aa17.25■□□□□ 0.35
CTNS-206ENST00000488623 YEATS4O95619 227 aa17.25■□□□□ 0.35
CTNS-206ENST00000488623 TM4SF4P48230 202 aa17.25■□□□□ 0.35
CTNS-206ENST00000488623 SLC39A14Q15043 492 aa17.25■□□□□ 0.35
CTNS-206ENST00000488623 NEK8Q86SG6 692 aa17.25■□□□□ 0.35
CTNS-206ENST00000488623 CHST13Q8NET6 341 aa17.25■□□□□ 0.35
CTNS-206ENST00000488623 ACAD9Q9H845 621 aa17.25■□□□□ 0.35
CTNS-206ENST00000488623 COL20A1Q9P218 1284 aa17.25■□□□□ 0.35
CTNS-206ENST00000488623 SPDYE3A6NKU9 549 aa17.24■□□□□ 0.35
CTNS-206ENST00000488623 GOLGA6L22H0YM25 854 aa17.24■□□□□ 0.35
CTNS-206ENST00000488623 GCLCP48506 637 aaPredicted RBP17.24■□□□□ 0.35
CTNS-206ENST00000488623 ERVK-9P63128 1117 aa17.24■□□□□ 0.35
CTNS-206ENST00000488623 ERVK-24P63145 666 aa17.24■□□□□ 0.35
CTNS-206ENST00000488623 BAATQ14032 418 aaPredicted RBP17.24■□□□□ 0.35
CTNS-206ENST00000488623 STK38Q15208 465 aa17.24■□□□□ 0.35
CTNS-206ENST00000488623 NSMFQ6X4W1 530 aa17.24■□□□□ 0.35
CTNS-206ENST00000488623 RNF207Q6ZRF8 634 aa17.24■□□□□ 0.35
CTNS-206ENST00000488623 SYTL5Q8TDW5 730 aaPredicted RBP17.24■□□□□ 0.35
CTNS-206ENST00000488623 SMCR8Q8TEV9 937 aaPredicted RBP17.24■□□□□ 0.35
CTNS-206ENST00000488623 CRYGNQ8WXF5 182 aa17.24■□□□□ 0.35
CTNS-206ENST00000488623 PARK7Q99497 189 aaKnown RBP17.24■□□□□ 0.35
CTNS-206ENST00000488623 ZCCHC17Q9NP64 241 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms