RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 EFCAB14O75071 495 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 LRRN2O75325 713 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 VAMP4O75379 141 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 TIAF1O95411 115 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 SCGB1D2O95969 90 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 VSIG8P0DPA2 414 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 ITGA4P13612 1032 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 KCNJ6P48051 423 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 NEK2P51955 445 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 RHBDL3P58872 404 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 ITKQ08881 620 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 PPP2R5DQ14738 602 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 PRSS53Q2L4Q9 553 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 SKOR2Q2VWA4 1001 aaPredicted RBP4.4□□□□□ -1.71
GPNMB-212ENST00000487890 NBPF9Q3BBW0 867 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 CFAP100Q494V2 611 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 RNF219Q5W0B1 726 aaPredicted RBP4.4□□□□□ -1.71
GPNMB-212ENST00000487890 CDCA2Q69YH5 1023 aaPredicted RBP4.4□□□□□ -1.71
GPNMB-212ENST00000487890 DENND5AQ6IQ26 1287 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 POMZP3Q6PJE2 187 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 ACAD11Q709F0 780 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 NECAB2Q7Z6G3 386 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 C14orf80Q86SX3 495 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 CDH24Q86UP0 819 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 CCAR1Q8IX12 1150 aaKnown RBP4.4□□□□□ -1.71
GPNMB-212ENST00000487890 EXOC8Q8IYI6 725 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 DTWD1Q8N5C7 304 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 TMEM145Q8NBT3 493 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 C2CD4AQ8NCU7 369 aaPredicted RBP4.4□□□□□ -1.71
GPNMB-212ENST00000487890 KCTD13Q8WZ19 329 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 PTPRN2Q92932 1015 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 MTMR8Q96EF0 704 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 C1orf159Q96HA4 380 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 CCDC136Q96JN2 1154 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 MAGEB10Q96LZ2 347 aaPredicted RBP4.4□□□□□ -1.71
GPNMB-212ENST00000487890 SMAD5Q99717 465 aaKnown RBP4.4□□□□□ -1.71
GPNMB-212ENST00000487890 PRDM14Q9GZV8 571 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 NOL6Q9H6R4 1146 aaKnown RBP4.4□□□□□ -1.71
GPNMB-212ENST00000487890 CYP4F12Q9HCS2 524 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 TET3O43151 1660 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 GCC2Q8IWJ2 1684 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 CPS1P31327 1500 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 EFCAB6Q5THR3 1501 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 ERBB4Q15303 1308 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 ANKRD50Q9ULJ7 1429 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 ADGRL2O95490 1459 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 A0A0A0MRY4 1105 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 TOM1O60784 492 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 LRIG2O94898 1065 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 SLITRK5O94991 958 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 CRTAMO95727 393 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 APBA3O96018 575 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 SNRPB2P08579 225 aaKnown RBP4.39□□□□□ -1.71
GPNMB-212ENST00000487890 HOXB4P17483 251 aaPredicted RBP4.39□□□□□ -1.71
GPNMB-212ENST00000487890 KCNA6P17658 529 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 AMPD1P23109 780 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 HOXC12P31275 282 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 IGFALSP35858 605 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 GNALP38405 381 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 ECI1P42126 302 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 RNF4P78317 190 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 MAP4K2Q12851 820 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 SNW1Q13573 536 aaKnown RBP4.39□□□□□ -1.71
GPNMB-212ENST00000487890 NOL9Q5SY16 702 aaKnown RBP4.39□□□□□ -1.71
GPNMB-212ENST00000487890 SLC35F1Q5T1Q4 408 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 LETMD1Q6P1Q0 360 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 ABHD17CQ6PCB6 329 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 FMR1NBQ8N0W7 255 aaPredicted RBP4.39□□□□□ -1.71
GPNMB-212ENST00000487890 MFSD2AQ8NA29 543 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 KREMEN2Q8NCW0 462 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 SYTL5Q8TDW5 730 aaPredicted RBP4.39□□□□□ -1.71
GPNMB-212ENST00000487890 COG1Q8WTW3 980 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 YIPF4Q9BSR8 244 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 RNF208Q9H0X6 261 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 NKX2-4Q9H2Z4 354 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 MYH16Q9H6N6 1097 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 ZIM2Q9NZV7 527 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 PCOLCE2Q9UKZ9 415 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 PCDHA9Q9Y5H5 950 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 FHOD1Q9Y613 1164 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 SYNMO15061 1565 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 VWDEQ8N2E2 1590 aa4.39□□□□□ -1.71
GPNMB-212ENST00000487890 ARHGAP31Q2M1Z3 1444 aa4.38□□□□□ -1.71
GPNMB-212ENST00000487890 ADGRB3O60242 1522 aa4.38□□□□□ -1.71
GPNMB-212ENST00000487890 GABRDO14764 452 aa4.38□□□□□ -1.71
GPNMB-212ENST00000487890 BCRP11274 1271 aa4.38□□□□□ -1.71
GPNMB-212ENST00000487890 BPIP17213 487 aa4.38□□□□□ -1.71
GPNMB-212ENST00000487890 TMPRSS15P98073 1019 aa4.38□□□□□ -1.71
GPNMB-212ENST00000487890 GORABQ5T7V8 394 aa4.38□□□□□ -1.71
GPNMB-212ENST00000487890 KCNT2Q6UVM3 1135 aa4.38□□□□□ -1.71
GPNMB-212ENST00000487890 USP53Q70EK8 1073 aa4.38□□□□□ -1.71
GPNMB-212ENST00000487890 MAMDC2Q7Z304 686 aaPredicted RBP4.38□□□□□ -1.71
GPNMB-212ENST00000487890 NPAS3Q8IXF0 933 aa4.38□□□□□ -1.71
GPNMB-212ENST00000487890 CHPFQ8IZ52 775 aa4.38□□□□□ -1.71
GPNMB-212ENST00000487890 CRACR2BQ8N4Y2 399 aaPredicted RBP4.38□□□□□ -1.71
GPNMB-212ENST00000487890 FIBCD1Q8N539 461 aa4.38□□□□□ -1.71
GPNMB-212ENST00000487890 CNTD1Q8N815 330 aa4.38□□□□□ -1.71
GPNMB-212ENST00000487890 PI4K2BQ8TCG2 481 aa4.38□□□□□ -1.71
GPNMB-212ENST00000487890 RELTQ969Z4 430 aa4.38□□□□□ -1.71
GPNMB-212ENST00000487890 HOOK2Q96ED9 719 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms