RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 FOCADQ5VW36 1801 aa7.95□□□□□ -1.14
SEC22C-215ENST00000487701 A0A1B0GUL7 405 aa7.95□□□□□ -1.14
SEC22C-215ENST00000487701 TNFRSF21O75509 655 aa7.95□□□□□ -1.14
SEC22C-215ENST00000487701 IFIT1P09914 478 aaKnown RBP7.95□□□□□ -1.14
SEC22C-215ENST00000487701 ACPPP15309 386 aa7.95□□□□□ -1.14
SEC22C-215ENST00000487701 CAVIN4Q5BKX8 364 aa7.95□□□□□ -1.14
SEC22C-215ENST00000487701 VPS37DQ86XT2 251 aa7.95□□□□□ -1.14
SEC22C-215ENST00000487701 KIAA0825Q8IV33 1275 aa7.95□□□□□ -1.14
SEC22C-215ENST00000487701 CNTROBQ8N137 903 aa7.95□□□□□ -1.14
SEC22C-215ENST00000487701 CEP120Q8N960 986 aa7.95□□□□□ -1.14
SEC22C-215ENST00000487701 MUC3BQ9H195 1237 aa7.95□□□□□ -1.14
SEC22C-215ENST00000487701 CHRDQ9H2X0 955 aa7.95□□□□□ -1.14
SEC22C-215ENST00000487701 SEMA6BQ9H3T3 888 aa7.95□□□□□ -1.14
SEC22C-215ENST00000487701 PGAP2Q9UHJ9 254 aa7.95□□□□□ -1.14
SEC22C-215ENST00000487701 FOXD3Q9UJU5 478 aaPredicted RBP7.95□□□□□ -1.14
SEC22C-215ENST00000487701 BRPF3Q9ULD4 1205 aa7.95□□□□□ -1.14
SEC22C-215ENST00000487701 NOP58Q9Y2X3 529 aaKnown RBP7.95□□□□□ -1.14
SEC22C-215ENST00000487701 PCDHAC2Q9Y5I4 1007 aa7.95□□□□□ -1.14
SEC22C-215ENST00000487701 AOX1Q06278 1338 aa7.95□□□□□ -1.14
SEC22C-215ENST00000487701 LINC01387J3KSC0 135 aa7.94□□□□□ -1.14
SEC22C-215ENST00000487701 TRAF5O00463 557 aa7.94□□□□□ -1.14
SEC22C-215ENST00000487701 SURF6O75683 361 aaKnown RBP7.94□□□□□ -1.14
SEC22C-215ENST00000487701 PTPRAP18433 802 aa7.94□□□□□ -1.14
SEC22C-215ENST00000487701 CDC27P30260 824 aa7.94□□□□□ -1.14
SEC22C-215ENST00000487701 PHKA1P46020 1223 aa7.94□□□□□ -1.14
SEC22C-215ENST00000487701 TIMM10P62072 90 aa7.94□□□□□ -1.14
SEC22C-215ENST00000487701 FKBP1AP62942 108 aaKnown RBP7.94□□□□□ -1.14
SEC22C-215ENST00000487701 CHAF1AQ13111 956 aaPredicted RBP7.94□□□□□ -1.14
SEC22C-215ENST00000487701 G3BP1Q13283 466 aaKnown RBP eCLIP7.94□□□□□ -1.14
SEC22C-215ENST00000487701 MFSD14BQ5SR56 506 aa7.94□□□□□ -1.14
SEC22C-215ENST00000487701 IGF2-ASQ6U949 168 aa7.94□□□□□ -1.14
SEC22C-215ENST00000487701 DLK2Q6UY11 383 aa7.94□□□□□ -1.14
SEC22C-215ENST00000487701 MAP4K3Q8IVH8 894 aa7.94□□□□□ -1.14
SEC22C-215ENST00000487701 PMEPA1Q969W9 287 aa7.94□□□□□ -1.14
SEC22C-215ENST00000487701 ZBED3Q96IU2 234 aaPredicted RBP7.94□□□□□ -1.14
SEC22C-215ENST00000487701 GLIS2Q9BZE0 524 aaPredicted RBP7.94□□□□□ -1.14
SEC22C-215ENST00000487701 MYOZ2Q9NPC6 264 aa7.94□□□□□ -1.14
SEC22C-215ENST00000487701 SALL4Q9UJQ4 1053 aa7.94□□□□□ -1.14
SEC22C-215ENST00000487701 EXOC6BQ9Y2D4 811 aa7.94□□□□□ -1.14
SEC22C-215ENST00000487701 PAPPA2Q9BXP8 1791 aa7.94□□□□□ -1.14
SEC22C-215ENST00000487701 THSD7BQ9C0I4 1608 aa7.93□□□□□ -1.14
SEC22C-215ENST00000487701 F8W031 263 aaPredicted RBP7.93□□□□□ -1.14
SEC22C-215ENST00000487701 DLL1O00548 723 aa7.93□□□□□ -1.14
SEC22C-215ENST00000487701 EREGO14944 169 aa7.93□□□□□ -1.14
SEC22C-215ENST00000487701 SETDB1Q15047 1291 aa7.93□□□□□ -1.14
SEC22C-215ENST00000487701 NBPF9Q3BBW0 867 aa7.93□□□□□ -1.14
SEC22C-215ENST00000487701 FAM117BQ6P1L5 589 aa7.93□□□□□ -1.14
SEC22C-215ENST00000487701 RPAP2Q8IXW5 612 aaPredicted RBP7.93□□□□□ -1.14
SEC22C-215ENST00000487701 GJD3Q8N144 294 aa7.93□□□□□ -1.14
SEC22C-215ENST00000487701 CRBNQ96SW2 442 aa7.93□□□□□ -1.14
SEC22C-215ENST00000487701 SRA1Q9HD15 236 aaKnown RBP7.93□□□□□ -1.14
SEC22C-215ENST00000487701 SH2B1Q9NRF2 756 aaPredicted RBP7.93□□□□□ -1.14
SEC22C-215ENST00000487701 GGA3Q9NZ52 723 aa7.93□□□□□ -1.14
SEC22C-215ENST00000487701 SCAF8Q9UPN6 1271 aaKnown RBP7.93□□□□□ -1.14
SEC22C-215ENST00000487701 LAMB1P07942 1786 aa7.92□□□□□ -1.14
SEC22C-215ENST00000487701 ADM5C9JUS6 153 aa7.92□□□□□ -1.14
SEC22C-215ENST00000487701 WNT10BO00744 389 aa7.92□□□□□ -1.14
SEC22C-215ENST00000487701 NDUFB5O43674 189 aa7.92□□□□□ -1.14
SEC22C-215ENST00000487701 OS9Q13438 667 aaPredicted RBP7.92□□□□□ -1.14
SEC22C-215ENST00000487701 RASGRF1Q13972 1273 aa7.92□□□□□ -1.14
SEC22C-215ENST00000487701 TNNI3KQ59H18 835 aa7.92□□□□□ -1.14
SEC22C-215ENST00000487701 ANGEL2Q5VTE6 544 aaKnown RBP7.92□□□□□ -1.14
SEC22C-215ENST00000487701 USP48Q86UV5 1035 aa7.92□□□□□ -1.14
SEC22C-215ENST00000487701 POP1Q99575 1024 aaKnown RBP7.92□□□□□ -1.14
SEC22C-215ENST00000487701 DBNDD2Q9BQY9 259 aa7.92□□□□□ -1.14
SEC22C-215ENST00000487701 TTF2Q9UNY4 1162 aaKnown RBP7.92□□□□□ -1.14
SEC22C-215ENST00000487701 AKAP2Q9Y2D5 859 aa7.92□□□□□ -1.14
SEC22C-215ENST00000487701 FPGT-TNNI3KV9GXZ4 949 aa7.92□□□□□ -1.14
SEC22C-215ENST00000487701 FRAT2O75474 233 aaPredicted RBP7.91□□□□□ -1.14
SEC22C-215ENST00000487701 TRPA1O75762 1119 aa7.91□□□□□ -1.14
SEC22C-215ENST00000487701 EDN3P14138 238 aa7.91□□□□□ -1.14
SEC22C-215ENST00000487701 EPHA1P21709 976 aa7.91□□□□□ -1.14
SEC22C-215ENST00000487701 IREB2P48200 963 aaKnown RBP7.91□□□□□ -1.14
SEC22C-215ENST00000487701 MMP14P50281 582 aa7.91□□□□□ -1.14
SEC22C-215ENST00000487701 CFAP100Q494V2 611 aa7.91□□□□□ -1.14
SEC22C-215ENST00000487701 CST9Q5W186 159 aa7.91□□□□□ -1.14
SEC22C-215ENST00000487701 PI16Q6UXB8 463 aa7.91□□□□□ -1.14
SEC22C-215ENST00000487701 ADAMTSL4Q6UY14 1074 aa7.91□□□□□ -1.14
SEC22C-215ENST00000487701 KRT26Q7Z3Y9 468 aa7.91□□□□□ -1.14
SEC22C-215ENST00000487701 DNAJC5GQ8N7S2 189 aa7.91□□□□□ -1.14
SEC22C-215ENST00000487701 TBC1D22AQ8WUA7 517 aa7.91□□□□□ -1.14
SEC22C-215ENST00000487701 WFDC12Q8WWY7 111 aa7.91□□□□□ -1.14
SEC22C-215ENST00000487701 EAF2Q96CJ1 260 aaPredicted RBP7.91□□□□□ -1.14
SEC22C-215ENST00000487701 PRMT6Q96LA8 375 aaPredicted RBP7.91□□□□□ -1.14
SEC22C-215ENST00000487701 NEUROD6Q96NK8 337 aa7.91□□□□□ -1.14
SEC22C-215ENST00000487701 MRPL18Q9H0U6 180 aaKnown RBP7.91□□□□□ -1.14
SEC22C-215ENST00000487701 CHMP4BQ9H444 224 aaKnown RBP7.91□□□□□ -1.14
SEC22C-215ENST00000487701 GPR108Q9NPR9 543 aa7.91□□□□□ -1.14
SEC22C-215ENST00000487701 DZANK1Q9NVP4 752 aa7.91□□□□□ -1.14
SEC22C-215ENST00000487701 DBNLQ9UJU6 430 aaKnown RBP7.91□□□□□ -1.14
SEC22C-215ENST00000487701 HDAC9Q9UKV0 1011 aa7.91□□□□□ -1.14
SEC22C-215ENST00000487701 PITPNM2Q9BZ72 1349 aa7.91□□□□□ -1.14
SEC22C-215ENST00000487701 MYH1P12882 1939 aa7.9□□□□□ -1.14
SEC22C-215ENST00000487701 SSC5DA1L4H1 1573 aa7.9□□□□□ -1.14
SEC22C-215ENST00000487701 PDS5AQ29RF7 1337 aaKnown RBP7.9□□□□□ -1.14
SEC22C-215ENST00000487701 SALL1Q9NSC2 1324 aa7.9□□□□□ -1.14
SEC22C-215ENST00000487701 PDE2AO00408 941 aaPredicted RBP7.9□□□□□ -1.14
SEC22C-215ENST00000487701 HMMRO75330 724 aa7.9□□□□□ -1.14
SEC22C-215ENST00000487701 PRDX5P30044 214 aa7.9□□□□□ -1.14
SEC22C-215ENST00000487701 MCAMP43121 646 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms