RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 IGSF22Q8N9C0 903 aa23■■□□□ 1.27
PHF1-209ENST00000487667 RMND1Q9NWS8 449 aa23■■□□□ 1.27
PHF1-209ENST00000487667 MAN1B1Q9UKM7 699 aa23■■□□□ 1.27
PHF1-209ENST00000487667 MRPL11Q9Y3B7 192 aaKnown RBP23■■□□□ 1.27
PHF1-209ENST00000487667 CYP3A7-CYP3A51PA0A087WV96 503 aa23■■□□□ 1.27
PHF1-209ENST00000487667 FDX1P10109 184 aa23■■□□□ 1.27
PHF1-209ENST00000487667 CYP3A7P24462 503 aa23■■□□□ 1.27
PHF1-209ENST00000487667 MORC3Q14149 939 aa23■■□□□ 1.27
PHF1-209ENST00000487667 PDXDC2PQ6P474 469 aa23■■□□□ 1.27
PHF1-209ENST00000487667 SCYL3Q8IZE3 742 aa23■■□□□ 1.27
PHF1-209ENST00000487667 WDR18Q9BV38 432 aa23■■□□□ 1.27
PHF1-209ENST00000487667 TRIM5Q9C035 493 aa23■■□□□ 1.27
PHF1-209ENST00000487667 DDX25Q9UHL0 483 aaKnown RBP23■■□□□ 1.27
PHF1-209ENST00000487667 MEIS2O14770 477 aa22.99■■□□□ 1.27
PHF1-209ENST00000487667 NBPF12Q5TAG4 269 aaPredicted RBP22.99■■□□□ 1.27
PHF1-209ENST00000487667 CALML4Q96GE6 196 aa22.99■■□□□ 1.27
PHF1-209ENST00000487667 GTPBP4Q9BZE4 634 aaKnown RBP22.99■■□□□ 1.27
PHF1-209ENST00000487667 EHMT1Q9H9B1 1298 aa22.99■■□□□ 1.27
PHF1-209ENST00000487667 ABCB11O95342 1321 aa22.99■■□□□ 1.27
PHF1-209ENST00000487667 CDC25BP30305 580 aa22.98■■□□□ 1.27
PHF1-209ENST00000487667 DPYDQ12882 1025 aa22.98■■□□□ 1.27
PHF1-209ENST00000487667 KIAA1755Q5JYT7 1200 aa22.98■■□□□ 1.27
PHF1-209ENST00000487667 CABP7Q86V35 215 aa22.98■■□□□ 1.27
PHF1-209ENST00000487667 POTEDQ86YR6 584 aa22.98■■□□□ 1.27
PHF1-209ENST00000487667 PICK1Q9NRD5 415 aa22.98■■□□□ 1.27
PHF1-209ENST00000487667 USP17L15C9J2P7 530 aa22.98■■□□□ 1.27
PHF1-209ENST00000487667 USP17L13C9JLJ4 530 aa22.98■■□□□ 1.27
PHF1-209ENST00000487667 USP17L11C9JVI0 530 aa22.98■■□□□ 1.27
PHF1-209ENST00000487667 USP17L18D6R9N7 530 aa22.98■■□□□ 1.27
PHF1-209ENST00000487667 USP17L22D6RA61 530 aa22.98■■□□□ 1.27
PHF1-209ENST00000487667 USP17L17D6RBQ6 530 aa22.98■■□□□ 1.27
PHF1-209ENST00000487667 USP17L19D6RCP7 530 aa22.98■■□□□ 1.27
PHF1-209ENST00000487667 USP17L20D6RJB6 530 aa22.98■■□□□ 1.27
PHF1-209ENST00000487667 FOXN1O15353 648 aa22.98■■□□□ 1.27
PHF1-209ENST00000487667 MYL5Q02045 173 aa22.98■■□□□ 1.27
PHF1-209ENST00000487667 USP17L24Q0WX57 530 aa22.98■■□□□ 1.27
PHF1-209ENST00000487667 USH1GQ495M9 461 aa22.98■■□□□ 1.27
PHF1-209ENST00000487667 USP17L6PQ6QN14 398 aa22.98■■□□□ 1.27
PHF1-209ENST00000487667 PLA2G4DQ86XP0 818 aa22.98■■□□□ 1.27
PHF1-209ENST00000487667 PRPF38AQ8NAV1 312 aaKnown RBP22.98■■□□□ 1.27
PHF1-209ENST00000487667 KIFC2Q96AC6 838 aa22.98■■□□□ 1.27
PHF1-209ENST00000487667 ADARB2Q9NS39 739 aaKnown RBP22.98■■□□□ 1.27
PHF1-209ENST00000487667 MARCH6O60337 910 aa22.97■■□□□ 1.27
PHF1-209ENST00000487667 ASTN2O75129 1339 aaPredicted RBP22.97■■□□□ 1.27
PHF1-209ENST00000487667 TRPM4Q8TD43 1214 aa22.97■■□□□ 1.27
PHF1-209ENST00000487667 MRFAP1L1Q96HT8 127 aa22.97■■□□□ 1.27
PHF1-209ENST00000487667 MBOAT7Q96N66 472 aa22.97■■□□□ 1.27
PHF1-209ENST00000487667 GGA3Q9NZ52 723 aa22.97■■□□□ 1.27
PHF1-209ENST00000487667 STK24Q9Y6E0 443 aa22.97■■□□□ 1.27
PHF1-209ENST00000487667 DOCK1Q14185 1865 aa22.97■■□□□ 1.27
PHF1-209ENST00000487667 TBX3O15119 743 aa22.96■■□□□ 1.27
PHF1-209ENST00000487667 TDP2O95551 362 aa22.96■■□□□ 1.27
PHF1-209ENST00000487667 PRR29P0C7W0 189 aa22.96■■□□□ 1.27
PHF1-209ENST00000487667 ERCC5P28715 1186 aaPredicted RBP22.96■■□□□ 1.27
PHF1-209ENST00000487667 EPS15P42566 896 aa22.96■■□□□ 1.27
PHF1-209ENST00000487667 TXKP42681 527 aa22.96■■□□□ 1.27
PHF1-209ENST00000487667 AFMP43652 599 aa22.96■■□□□ 1.27
PHF1-209ENST00000487667 ZNF75DP51815 510 aa22.96■■□□□ 1.27
PHF1-209ENST00000487667 AMPD3Q01432 767 aa22.96■■□□□ 1.27
PHF1-209ENST00000487667 KARSQ15046 597 aaKnown RBP22.96■■□□□ 1.27
PHF1-209ENST00000487667 DPY19L2Q6NUT2 758 aa22.96■■□□□ 1.27
PHF1-209ENST00000487667 SLFN12Q8IYM2 578 aa22.96■■□□□ 1.27
PHF1-209ENST00000487667 SLF1Q9BQI6 1058 aa22.96■■□□□ 1.27
PHF1-209ENST00000487667 LRWD1Q9UFC0 647 aa22.96■■□□□ 1.27
PHF1-209ENST00000487667 SREBF1P36956 1147 aa22.96■■□□□ 1.27
PHF1-209ENST00000487667 TECP42680 631 aa22.96■■□□□ 1.27
PHF1-209ENST00000487667 ZYXQ15942 572 aaKnown RBP22.96■■□□□ 1.27
PHF1-209ENST00000487667 SAMD3Q8N6K7 520 aa22.96■■□□□ 1.27
PHF1-209ENST00000487667 STK17AQ9UEE5 414 aa22.95■■□□□ 1.26
PHF1-209ENST00000487667 SCAF8Q9UPN6 1271 aaKnown RBP22.95■■□□□ 1.26
PHF1-209ENST00000487667 RABGAP1Q9Y3P9 1069 aa22.95■■□□□ 1.26
PHF1-209ENST00000487667 GCOM1H8Y6P7 765 aaPredicted RBP22.94■■□□□ 1.26
PHF1-209ENST00000487667 AP5Z1O43299 807 aa22.94■■□□□ 1.26
PHF1-209ENST00000487667 SLC37A4O43826 429 aa22.94■■□□□ 1.26
PHF1-209ENST00000487667 CYP3A4P08684 503 aa22.94■■□□□ 1.26
PHF1-209ENST00000487667 POLR2MP0CAP2 368 aa22.94■■□□□ 1.26
PHF1-209ENST00000487667 ARHGAP4P98171 946 aa22.94■■□□□ 1.26
PHF1-209ENST00000487667 KRT79Q5XKE5 535 aa22.94■■□□□ 1.26
PHF1-209ENST00000487667 CRYGNQ8WXF5 182 aa22.94■■□□□ 1.26
PHF1-209ENST00000487667 CCDC47Q96A33 483 aaKnown RBP22.94■■□□□ 1.26
PHF1-209ENST00000487667 LRRC27Q9C0I9 530 aa22.94■■□□□ 1.26
PHF1-209ENST00000487667 C19orf81C9J6K1 198 aa22.94■■□□□ 1.26
PHF1-209ENST00000487667 EDIL3O43854 480 aa22.94■■□□□ 1.26
PHF1-209ENST00000487667 ICAM1P05362 532 aa22.94■■□□□ 1.26
PHF1-209ENST00000487667 CIITAP33076 1130 aa22.94■■□□□ 1.26
PHF1-209ENST00000487667 Q4G0T1 1027 aa22.94■■□□□ 1.26
PHF1-209ENST00000487667 NOL9Q5SY16 702 aaKnown RBP22.94■■□□□ 1.26
PHF1-209ENST00000487667 GRAMD1CQ8IYS0 662 aa22.94■■□□□ 1.26
PHF1-209ENST00000487667 WRNIP1Q96S55 665 aa22.94■■□□□ 1.26
PHF1-209ENST00000487667 GLIS2Q9BZE0 524 aaPredicted RBP22.94■■□□□ 1.26
PHF1-209ENST00000487667 A0A087WWV3 80 aa22.93■■□□□ 1.26
PHF1-209ENST00000487667 MSNP26038 577 aaKnown RBP22.93■■□□□ 1.26
PHF1-209ENST00000487667 HOXA7P31268 230 aaPredicted RBP22.93■■□□□ 1.26
PHF1-209ENST00000487667 SNAP25P60880 206 aa22.93■■□□□ 1.26
PHF1-209ENST00000487667 ISM2Q6H9L7 571 aa22.93■■□□□ 1.26
PHF1-209ENST00000487667 ENOX1Q8TC92 643 aaKnown RBP22.93■■□□□ 1.26
PHF1-209ENST00000487667 CDK5RAP3Q96JB5 506 aa22.93■■□□□ 1.26
PHF1-209ENST00000487667 TTC12Q9H892 705 aaPredicted RBP22.93■■□□□ 1.26
PHF1-209ENST00000487667 KBTBD4Q9NVX7 518 aa22.93■■□□□ 1.26
PHF1-209ENST00000487667 MAP3K20Q9NYL2 800 aaKnown RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms