RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 PCDHA5Q9Y5H7 936 aa6.36□□□□□ -1.39
SNRNP40-205ENST00000486941 HCFC2Q9Y5Z7 792 aa6.36□□□□□ -1.39
SNRNP40-205ENST00000486941 KIDINS220Q9ULH0 1771 aa6.36□□□□□ -1.39
SNRNP40-205ENST00000486941 PTPRTO14522 1441 aa6.35□□□□□ -1.39
SNRNP40-205ENST00000486941 CNTLNQ9NXG0 1405 aa6.35□□□□□ -1.39
SNRNP40-205ENST00000486941 AFF3P51826 1226 aaKnown RBP6.35□□□□□ -1.39
SNRNP40-205ENST00000486941 CHMP4BP1P59074 171 aa6.35□□□□□ -1.39
SNRNP40-205ENST00000486941 MVKQ03426 396 aa6.35□□□□□ -1.39
SNRNP40-205ENST00000486941 GALNT18Q6P9A2 607 aa6.35□□□□□ -1.39
SNRNP40-205ENST00000486941 FEZF2Q8TBJ5 459 aa6.35□□□□□ -1.39
SNRNP40-205ENST00000486941 GIPC2Q8TF65 315 aa6.35□□□□□ -1.39
SNRNP40-205ENST00000486941 NKD1Q969G9 470 aa6.35□□□□□ -1.39
SNRNP40-205ENST00000486941 SLC12A9Q9BXP2 914 aa6.35□□□□□ -1.39
SNRNP40-205ENST00000486941 MKRN2Q9H000 416 aaKnown RBP6.35□□□□□ -1.39
SNRNP40-205ENST00000486941 WTIPA6NIX2 430 aaPredicted RBP6.34□□□□□ -1.39
SNRNP40-205ENST00000486941 ERCC3P19447 782 aa6.34□□□□□ -1.39
SNRNP40-205ENST00000486941 CBX2Q14781 532 aaPredicted RBP6.34□□□□□ -1.39
SNRNP40-205ENST00000486941 ZYXQ15942 572 aaKnown RBP6.34□□□□□ -1.39
SNRNP40-205ENST00000486941 TDRD10Q5VZ19 366 aaKnown RBP6.34□□□□□ -1.39
SNRNP40-205ENST00000486941 RPTNQ6XPR3 784 aa6.34□□□□□ -1.39
SNRNP40-205ENST00000486941 HS2ST1Q7LGA3 356 aa6.34□□□□□ -1.39
SNRNP40-205ENST00000486941 CDADC1Q9BWV3 514 aa6.34□□□□□ -1.39
SNRNP40-205ENST00000486941 BCL2L13Q9BXK5 485 aa6.34□□□□□ -1.39
SNRNP40-205ENST00000486941 IMPACTQ9P2X3 320 aa6.34□□□□□ -1.39
SNRNP40-205ENST00000486941 SUCOQ9UBS9 1254 aaKnown RBP6.34□□□□□ -1.39
SNRNP40-205ENST00000486941 FBXL21Q9UKT6 434 aa6.34□□□□□ -1.39
SNRNP40-205ENST00000486941 PCDHB12Q9Y5F1 795 aa6.34□□□□□ -1.39
SNRNP40-205ENST00000486941 FYCO1Q9BQS8 1478 aa6.34□□□□□ -1.4
SNRNP40-205ENST00000486941 MROH2AA6NES4 1674 aa6.33□□□□□ -1.4
SNRNP40-205ENST00000486941 IRS2Q9Y4H2 1338 aa6.33□□□□□ -1.4
SNRNP40-205ENST00000486941 SAMD9LQ8IVG5 1584 aa6.33□□□□□ -1.4
SNRNP40-205ENST00000486941 A0A1W2PQ45 241 aaPredicted RBP6.33□□□□□ -1.4
SNRNP40-205ENST00000486941 A0A1W2PQY0 241 aa6.33□□□□□ -1.4
SNRNP40-205ENST00000486941 NUDT19A8MXV4 375 aa6.33□□□□□ -1.4
SNRNP40-205ENST00000486941 ZNF165P49910 485 aa6.33□□□□□ -1.4
SNRNP40-205ENST00000486941 CYP4F8P98187 520 aa6.33□□□□□ -1.4
SNRNP40-205ENST00000486941 AXDND1Q5T1B0 1012 aaPredicted RBP6.33□□□□□ -1.4
SNRNP40-205ENST00000486941 DCAF15Q66K64 600 aa6.33□□□□□ -1.4
SNRNP40-205ENST00000486941 TMC6Q7Z403 805 aa6.33□□□□□ -1.4
SNRNP40-205ENST00000486941 C7orf61Q8IZ16 206 aa6.33□□□□□ -1.4
SNRNP40-205ENST00000486941 NUP43Q8NFH3 380 aa6.33□□□□□ -1.4
SNRNP40-205ENST00000486941 RTEL1Q9NZ71 1219 aa6.33□□□□□ -1.4
SNRNP40-205ENST00000486941 TAF6LQ9Y6J9 622 aa6.33□□□□□ -1.4
SNRNP40-205ENST00000486941 GPATCH8Q9UKJ3 1502 aaKnown RBP6.33□□□□□ -1.4
SNRNP40-205ENST00000486941 NPATQ14207 1427 aa6.33□□□□□ -1.4
SNRNP40-205ENST00000486941 KIAA1107Q9UPP5 1409 aa6.33□□□□□ -1.4
SNRNP40-205ENST00000486941 ZMYM3Q14202 1370 aa6.32□□□□□ -1.4
SNRNP40-205ENST00000486941 SPAG9O60271 1321 aaKnown RBP6.32□□□□□ -1.4
SNRNP40-205ENST00000486941 H0Y8X5 98 aa6.32□□□□□ -1.4
SNRNP40-205ENST00000486941 RFXAPO00287 272 aa6.32□□□□□ -1.4
SNRNP40-205ENST00000486941 MPOP05164 745 aa6.32□□□□□ -1.4
SNRNP40-205ENST00000486941 FBLN1P23142 703 aa6.32□□□□□ -1.4
SNRNP40-205ENST00000486941 IGFBP6P24592 240 aaPredicted RBP6.32□□□□□ -1.4
SNRNP40-205ENST00000486941 HNRNPMP52272 730 aaKnown RBP eCLIP6.32□□□□□ -1.4
SNRNP40-205ENST00000486941 ZNF445P59923 1031 aa6.32□□□□□ -1.4
SNRNP40-205ENST00000486941 RAB3GAP1Q15042 981 aa6.32□□□□□ -1.4
SNRNP40-205ENST00000486941 SKOR2Q2VWA4 1001 aaPredicted RBP6.32□□□□□ -1.4
SNRNP40-205ENST00000486941 INTS3Q68E01 1043 aaKnown RBP6.32□□□□□ -1.4
SNRNP40-205ENST00000486941 RUFY4Q6ZNE9 571 aa6.32□□□□□ -1.4
SNRNP40-205ENST00000486941 CFDP1Q9UEE9 299 aaPredicted RBP6.32□□□□□ -1.4
SNRNP40-205ENST00000486941 ZNRF3Q9ULT6 936 aa6.32□□□□□ -1.4
SNRNP40-205ENST00000486941 JAG2Q9Y219 1238 aa6.32□□□□□ -1.4
SNRNP40-205ENST00000486941 PLEKHH2Q8IVE3 1493 aa6.32□□□□□ -1.4
SNRNP40-205ENST00000486941 NCOA1Q15788 1441 aa6.32□□□□□ -1.4
SNRNP40-205ENST00000486941 SYCP2Q9BX26 1530 aa6.31□□□□□ -1.4
SNRNP40-205ENST00000486941 SUPT6HQ7KZ85 1726 aaKnown RBP6.31□□□□□ -1.4
SNRNP40-205ENST00000486941 IQSEC2Q5JU85 1478 aa6.31□□□□□ -1.4
SNRNP40-205ENST00000486941 FFAR3O14843 346 aa6.31□□□□□ -1.4
SNRNP40-205ENST00000486941 LRRFIP1Q32MZ4 808 aaKnown RBP6.31□□□□□ -1.4
SNRNP40-205ENST00000486941 CNKSR3Q6P9H4 555 aa6.31□□□□□ -1.4
SNRNP40-205ENST00000486941 TMEM151BQ8IW70 566 aa6.31□□□□□ -1.4
SNRNP40-205ENST00000486941 ZDHHC14Q8IZN3 488 aa6.31□□□□□ -1.4
SNRNP40-205ENST00000486941 BRF1Q92994 677 aa6.31□□□□□ -1.4
SNRNP40-205ENST00000486941 SPON2Q9BUD6 331 aa6.31□□□□□ -1.4
SNRNP40-205ENST00000486941 PRR13Q9NZ81 148 aa6.31□□□□□ -1.4
SNRNP40-205ENST00000486941 LTBP4Q8N2S1 1624 aa6.31□□□□□ -1.4
SNRNP40-205ENST00000486941 CCNB3Q8WWL7 1395 aa6.31□□□□□ -1.4
SNRNP40-205ENST00000486941 ATP7AQ04656 1500 aa6.3□□□□□ -1.4
SNRNP40-205ENST00000486941 BUB1BO60566 1050 aaPredicted RBP6.3□□□□□ -1.4
SNRNP40-205ENST00000486941 GSTM1P09488 218 aa6.3□□□□□ -1.4
SNRNP40-205ENST00000486941 PMS1P54277 932 aaKnown RBP6.3□□□□□ -1.4
SNRNP40-205ENST00000486941 LAPTM5Q13571 262 aa6.3□□□□□ -1.4
SNRNP40-205ENST00000486941 NFIXQ14938 502 aa6.3□□□□□ -1.4
SNRNP40-205ENST00000486941 PLEKHN1Q494U1 663 aaPredicted RBP6.3□□□□□ -1.4
SNRNP40-205ENST00000486941 KIAA0825Q8IV33 1275 aa6.3□□□□□ -1.4
SNRNP40-205ENST00000486941 FCRL3Q96P31 734 aaPredicted RBP6.3□□□□□ -1.4
SNRNP40-205ENST00000486941 SRRTQ9BXP5 876 aaKnown RBP6.3□□□□□ -1.4
SNRNP40-205ENST00000486941 ZNF451Q9Y4E5 1061 aa6.3□□□□□ -1.4
SNRNP40-205ENST00000486941 CLTCQ00610 1675 aaKnown RBP6.3□□□□□ -1.4
SNRNP40-205ENST00000486941 A2MP01023 1474 aa6.29□□□□□ -1.4
SNRNP40-205ENST00000486941 CAMSAP1Q5T5Y3 1602 aa6.29□□□□□ -1.4
SNRNP40-205ENST00000486941 ABLIM1O14639 778 aa6.29□□□□□ -1.4
SNRNP40-205ENST00000486941 PLXNC1O60486 1568 aa6.29□□□□□ -1.4
SNRNP40-205ENST00000486941 GSNP06396 782 aa6.29□□□□□ -1.4
SNRNP40-205ENST00000486941 LIMS1P48059 325 aa6.29□□□□□ -1.4
SNRNP40-205ENST00000486941 NFKB2Q00653 900 aa6.29□□□□□ -1.4
SNRNP40-205ENST00000486941 ZNF394Q53GI3 561 aa6.29□□□□□ -1.4
SNRNP40-205ENST00000486941 ANKRD39Q53RE8 183 aa6.29□□□□□ -1.4
SNRNP40-205ENST00000486941 CXorf38Q8TB03 319 aa6.29□□□□□ -1.4
SNRNP40-205ENST00000486941 PWWP2AQ96N64 755 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms