RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 EPHX1P07099 455 aa6.92□□□□□ -1.3
GCFC2-209ENST00000486016 LIMS1P48059 325 aa6.92□□□□□ -1.3
GCFC2-209ENST00000486016 PRR5P85299 388 aa6.92□□□□□ -1.3
GCFC2-209ENST00000486016 HDLBPQ00341 1268 aaKnown RBP6.92□□□□□ -1.3
GCFC2-209ENST00000486016 PPP2R5DQ14738 602 aa6.92□□□□□ -1.3
GCFC2-209ENST00000486016 VWA3BQ502W6 1294 aa6.92□□□□□ -1.3
GCFC2-209ENST00000486016 EEF1DP3Q658K8 133 aa6.92□□□□□ -1.3
GCFC2-209ENST00000486016 BICRALQ6AI39 1079 aa6.92□□□□□ -1.3
GCFC2-209ENST00000486016 ADCY4Q8NFM4 1077 aa6.92□□□□□ -1.3
GCFC2-209ENST00000486016 OR6P1Q8NGX9 317 aa6.92□□□□□ -1.3
GCFC2-209ENST00000486016 RCC1LQ96I51 464 aaKnown RBP6.92□□□□□ -1.3
GCFC2-209ENST00000486016 CRBNQ96SW2 442 aa6.92□□□□□ -1.3
GCFC2-209ENST00000486016 VAMP4O75379 141 aa6.91□□□□□ -1.3
GCFC2-209ENST00000486016 PLA2G1BP04054 148 aaKnown RBP6.91□□□□□ -1.3
GCFC2-209ENST00000486016 TACR1P25103 407 aa6.91□□□□□ -1.3
GCFC2-209ENST00000486016 HEATR6Q6AI08 1181 aaKnown RBP6.91□□□□□ -1.3
GCFC2-209ENST00000486016 CGGBP1Q9UFW8 167 aaPredicted RBP6.91□□□□□ -1.3
GCFC2-209ENST00000486016 ZC3H12DA2A288 527 aaKnown RBP6.9□□□□□ -1.3
GCFC2-209ENST00000486016 F8W031 263 aaPredicted RBP6.9□□□□□ -1.3
GCFC2-209ENST00000486016 PFKLP17858 780 aa6.9□□□□□ -1.3
GCFC2-209ENST00000486016 CASP7P55210 303 aa6.9□□□□□ -1.3
GCFC2-209ENST00000486016 HTRA3P83110 453 aa6.9□□□□□ -1.3
GCFC2-209ENST00000486016 FOXO4P98177 505 aa6.9□□□□□ -1.3
GCFC2-209ENST00000486016 SLC7A5Q01650 507 aa6.9□□□□□ -1.3
GCFC2-209ENST00000486016 TARBP2Q15633 366 aaKnown RBP6.9□□□□□ -1.3
GCFC2-209ENST00000486016 SPATS1Q496A3 300 aa6.9□□□□□ -1.3
GCFC2-209ENST00000486016 NT5DC4Q86YG4 428 aa6.9□□□□□ -1.3
GCFC2-209ENST00000486016 SP8Q8IXZ3 490 aa6.9□□□□□ -1.3
GCFC2-209ENST00000486016 FNIP1Q8TF40 1166 aa6.9□□□□□ -1.3
GCFC2-209ENST00000486016 FGD4Q96M96 766 aa6.9□□□□□ -1.3
GCFC2-209ENST00000486016 MTA3Q9BTC8 594 aa6.9□□□□□ -1.3
GCFC2-209ENST00000486016 RNF38Q9H0F5 515 aa6.9□□□□□ -1.3
GCFC2-209ENST00000486016 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.9□□□□□ -1.3
GCFC2-209ENST00000486016 STXBP3O00186 592 aa6.89□□□□□ -1.31
GCFC2-209ENST00000486016 DLX2Q07687 328 aaPredicted RBP6.89□□□□□ -1.31
GCFC2-209ENST00000486016 GRB10Q13322 594 aa6.89□□□□□ -1.31
GCFC2-209ENST00000486016 FAM169BQ8N8A8 192 aa6.89□□□□□ -1.31
GCFC2-209ENST00000486016 TEPSINQ96N21 525 aa6.89□□□□□ -1.31
GCFC2-209ENST00000486016 GBP3Q9H0R5 595 aa6.89□□□□□ -1.31
GCFC2-209ENST00000486016 KIAA1522Q9P206 1035 aaPredicted RBP6.89□□□□□ -1.31
GCFC2-209ENST00000486016 ASGR2P07307 311 aa6.88□□□□□ -1.31
GCFC2-209ENST00000486016 INSRRP14616 1297 aa6.88□□□□□ -1.31
GCFC2-209ENST00000486016 EFEMP1Q12805 493 aa6.88□□□□□ -1.31
GCFC2-209ENST00000486016 TSPAN17Q96FV3 270 aa6.88□□□□□ -1.31
GCFC2-209ENST00000486016 ADAM7Q9H2U9 754 aa6.88□□□□□ -1.31
GCFC2-209ENST00000486016 BACE2Q9Y5Z0 518 aa6.88□□□□□ -1.31
GCFC2-209ENST00000486016 C2orf71A6NGG8 1288 aa6.87□□□□□ -1.31
GCFC2-209ENST00000486016 PPM1BO75688 479 aa6.87□□□□□ -1.31
GCFC2-209ENST00000486016 NASPP49321 788 aaPredicted RBP6.87□□□□□ -1.31
GCFC2-209ENST00000486016 SLURP1P55000 103 aa6.87□□□□□ -1.31
GCFC2-209ENST00000486016 PUM1Q14671 1186 aaKnown RBP eCLIP6.87□□□□□ -1.31
GCFC2-209ENST00000486016 DPY19L1Q2PZI1 675 aa6.87□□□□□ -1.31
GCFC2-209ENST00000486016 C9orf131Q5VYM1 1079 aa6.87□□□□□ -1.31
GCFC2-209ENST00000486016 SAPCD2Q86UD0 394 aa6.87□□□□□ -1.31
GCFC2-209ENST00000486016 NLGN1Q8N2Q7 840 aa6.87□□□□□ -1.31
GCFC2-209ENST00000486016 RGS22Q8NE09 1264 aa6.87□□□□□ -1.31
GCFC2-209ENST00000486016 RXFP1Q9HBX9 757 aa6.87□□□□□ -1.31
GCFC2-209ENST00000486016 APEX2Q9UBZ4 518 aa6.87□□□□□ -1.31
GCFC2-209ENST00000486016 A0A1W2PQJ5 194 aa6.86□□□□□ -1.31
GCFC2-209ENST00000486016 SH3D21A4FU49 640 aa6.86□□□□□ -1.31
GCFC2-209ENST00000486016 NCAM1P13591 858 aa6.86□□□□□ -1.31
GCFC2-209ENST00000486016 MC3RP41968 323 aa6.86□□□□□ -1.31
GCFC2-209ENST00000486016 AMPD2Q01433 879 aa6.86□□□□□ -1.31
GCFC2-209ENST00000486016 FRMD5Q7Z6J6 570 aa6.86□□□□□ -1.31
GCFC2-209ENST00000486016 ADAT2Q7Z6V5 191 aaKnown RBP6.86□□□□□ -1.31
GCFC2-209ENST00000486016 B3GNT8Q7Z7M8 397 aa6.86□□□□□ -1.31
GCFC2-209ENST00000486016 LZTR1Q8N653 840 aa6.86□□□□□ -1.31
GCFC2-209ENST00000486016 NETO2Q8NC67 525 aa6.86□□□□□ -1.31
GCFC2-209ENST00000486016 COPS5Q92905 334 aa6.86□□□□□ -1.31
GCFC2-209ENST00000486016 SEC16BQ96JE7 1060 aa6.86□□□□□ -1.31
GCFC2-209ENST00000486016 RWDD3Q9Y3V2 267 aa6.86□□□□□ -1.31
GCFC2-209ENST00000486016 A0A1B0GTL3 188 aa6.85□□□□□ -1.31
GCFC2-209ENST00000486016 SEPHS1P49903 392 aa6.85□□□□□ -1.31
GCFC2-209ENST00000486016 PLP2Q04941 152 aa6.85□□□□□ -1.31
GCFC2-209ENST00000486016 CYP4F3Q08477 520 aa6.85□□□□□ -1.31
GCFC2-209ENST00000486016 LIPIQ6XZB0 460 aa6.85□□□□□ -1.31
GCFC2-209ENST00000486016 CPNE8Q86YQ8 564 aa6.85□□□□□ -1.31
GCFC2-209ENST00000486016 ADGRG2Q8IZP9 1017 aa6.85□□□□□ -1.31
GCFC2-209ENST00000486016 ZNF526Q8TF50 670 aaPredicted RBP6.85□□□□□ -1.31
GCFC2-209ENST00000486016 CPA5Q8WXQ8 436 aa6.85□□□□□ -1.31
GCFC2-209ENST00000486016 BCAS3Q9H6U6 928 aa6.85□□□□□ -1.31
GCFC2-209ENST00000486016 EMC9Q9Y3B6 208 aa6.85□□□□□ -1.31
GCFC2-209ENST00000486016 C7orf72A4D263 438 aa6.84□□□□□ -1.31
GCFC2-209ENST00000486016 ANKRD34BA5PLL1 514 aa6.84□□□□□ -1.31
GCFC2-209ENST00000486016 UNCXA6NJT0 531 aa6.84□□□□□ -1.31
GCFC2-209ENST00000486016 PMLP29590 882 aa6.84□□□□□ -1.31
GCFC2-209ENST00000486016 TRIM26Q12899 539 aaPredicted RBP6.84□□□□□ -1.31
GCFC2-209ENST00000486016 MBLAC2Q68D91 279 aa6.84□□□□□ -1.31
GCFC2-209ENST00000486016 KIAA1211LQ6NV74 962 aa6.84□□□□□ -1.31
GCFC2-209ENST00000486016 VHLLQ6RSH7 139 aa6.84□□□□□ -1.31
GCFC2-209ENST00000486016 PLEKHO2Q8TD55 490 aa6.84□□□□□ -1.31
GCFC2-209ENST00000486016 MRRFQ96E11 262 aaKnown RBP6.84□□□□□ -1.31
GCFC2-209ENST00000486016 GULP1Q9UBP9 304 aa6.84□□□□□ -1.31
GCFC2-209ENST00000486016 PMF1-BGLAPU3KQ54 211 aa6.84□□□□□ -1.31
GCFC2-209ENST00000486016 PAMP19021 973 aa6.83□□□□□ -1.32
GCFC2-209ENST00000486016 KCNC1P48547 511 aa6.83□□□□□ -1.32
GCFC2-209ENST00000486016 PPP2R5EQ16537 467 aa6.83□□□□□ -1.32
GCFC2-209ENST00000486016 ZFYVE27Q5T4F4 411 aa6.83□□□□□ -1.32
GCFC2-209ENST00000486016 ALG3Q92685 438 aa6.83□□□□□ -1.32
GCFC2-209ENST00000486016 DPF3Q92784 378 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms