RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 LAPTM5Q13571 262 aa5.41□□□□□ -1.54
VPS50-216ENST00000484954 RAB3GAP1Q15042 981 aa5.41□□□□□ -1.54
VPS50-216ENST00000484954 RCSD1Q6JBY9 416 aa5.41□□□□□ -1.54
VPS50-216ENST00000484954 C6orf15Q6UXA7 325 aaPredicted RBP5.41□□□□□ -1.54
VPS50-216ENST00000484954 RPTNQ6XPR3 784 aa5.41□□□□□ -1.54
VPS50-216ENST00000484954 TMC6Q7Z403 805 aa5.41□□□□□ -1.54
VPS50-216ENST00000484954 JAMLQ86YT9 394 aa5.41□□□□□ -1.54
VPS50-216ENST00000484954 SUGT1Q9Y2Z0 365 aa5.41□□□□□ -1.54
VPS50-216ENST00000484954 ANKRD34BA5PLL1 514 aa5.4□□□□□ -1.54
VPS50-216ENST00000484954 HRKO00198 91 aa5.4□□□□□ -1.54
VPS50-216ENST00000484954 MPOP05164 745 aa5.4□□□□□ -1.54
VPS50-216ENST00000484954 FGRP09769 529 aa5.4□□□□□ -1.54
VPS50-216ENST00000484954 ARL4AP40617 200 aa5.4□□□□□ -1.54
VPS50-216ENST00000484954 NCKAP1LP55160 1127 aa5.4□□□□□ -1.54
VPS50-216ENST00000484954 CYP4F3Q08477 520 aa5.4□□□□□ -1.54
VPS50-216ENST00000484954 CYP2R1Q6VVX0 501 aa5.4□□□□□ -1.54
VPS50-216ENST00000484954 CPNE8Q86YQ8 564 aa5.4□□□□□ -1.54
VPS50-216ENST00000484954 RCC1LQ96I51 464 aaKnown RBP5.4□□□□□ -1.54
VPS50-216ENST00000484954 RXFP1Q9HBX9 757 aa5.4□□□□□ -1.54
VPS50-216ENST00000484954 EPB41L4AQ9HCS5 686 aaPredicted RBP5.4□□□□□ -1.54
VPS50-216ENST00000484954 SIRT5Q9NXA8 310 aa5.4□□□□□ -1.54
VPS50-216ENST00000484954 IRAK3Q9Y616 596 aa5.4□□□□□ -1.54
VPS50-216ENST00000484954 C2orf71A6NGG8 1288 aa5.39□□□□□ -1.55
VPS50-216ENST00000484954 TBX1O43435 398 aa5.39□□□□□ -1.55
VPS50-216ENST00000484954 KCNH1O95259 989 aa5.39□□□□□ -1.55
VPS50-216ENST00000484954 DBHP09172 617 aa5.39□□□□□ -1.55
VPS50-216ENST00000484954 AMPD2Q01433 879 aa5.39□□□□□ -1.55
VPS50-216ENST00000484954 GRB10Q13322 594 aa5.39□□□□□ -1.55
VPS50-216ENST00000484954 PLEKHN1Q494U1 663 aaPredicted RBP5.39□□□□□ -1.55
VPS50-216ENST00000484954 EEF1DP3Q658K8 133 aa5.39□□□□□ -1.55
VPS50-216ENST00000484954 LARP1BQ659C4 914 aaKnown RBP5.39□□□□□ -1.55
VPS50-216ENST00000484954 MBLAC2Q68D91 279 aa5.39□□□□□ -1.55
VPS50-216ENST00000484954 MRM1Q6IN84 353 aaKnown RBP5.39□□□□□ -1.55
VPS50-216ENST00000484954 MCF2L2Q86YR7 1114 aa5.39□□□□□ -1.55
VPS50-216ENST00000484954 IGDCC3Q8IVU1 814 aa5.39□□□□□ -1.55
VPS50-216ENST00000484954 DACT3Q96B18 629 aaPredicted RBP5.39□□□□□ -1.55
VPS50-216ENST00000484954 SIGLEC10Q96LC7 697 aa5.39□□□□□ -1.55
VPS50-216ENST00000484954 AKT3Q9Y243 479 aa5.39□□□□□ -1.55
VPS50-216ENST00000484954 EMC9Q9Y3B6 208 aa5.39□□□□□ -1.55
VPS50-216ENST00000484954 BACE2Q9Y5Z0 518 aa5.39□□□□□ -1.55
VPS50-216ENST00000484954 A0A1W2PQ27 194 aa5.38□□□□□ -1.55
VPS50-216ENST00000484954 A0A1W2PQ64 194 aa5.38□□□□□ -1.55
VPS50-216ENST00000484954 A0A1W2PQC6 194 aa5.38□□□□□ -1.55
VPS50-216ENST00000484954 A0A1W2PQD8 194 aa5.38□□□□□ -1.55
VPS50-216ENST00000484954 N4BP3O15049 544 aa5.38□□□□□ -1.55
VPS50-216ENST00000484954 TBC1D8O95759 1140 aa5.38□□□□□ -1.55
VPS50-216ENST00000484954 SSBP05455 408 aaKnown RBP eCLIP5.38□□□□□ -1.55
VPS50-216ENST00000484954 L1CAMP32004 1257 aa5.38□□□□□ -1.55
VPS50-216ENST00000484954 SEPHS1P49903 392 aa5.38□□□□□ -1.55
VPS50-216ENST00000484954 PLP2Q04941 152 aa5.38□□□□□ -1.55
VPS50-216ENST00000484954 CBX2Q14781 532 aaPredicted RBP5.38□□□□□ -1.55
VPS50-216ENST00000484954 SPATS1Q496A3 300 aa5.38□□□□□ -1.55
VPS50-216ENST00000484954 BICRALQ6AI39 1079 aa5.38□□□□□ -1.55
VPS50-216ENST00000484954 LDHDQ86WU2 507 aa5.38□□□□□ -1.55
VPS50-216ENST00000484954 MRGPRX3Q96LB0 322 aa5.38□□□□□ -1.55
VPS50-216ENST00000484954 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.38□□□□□ -1.55
VPS50-216ENST00000484954 BDH2Q9BUT1 245 aa5.38□□□□□ -1.55
VPS50-216ENST00000484954 ZNF408Q9H9D4 720 aa5.38□□□□□ -1.55
VPS50-216ENST00000484954 GPRC5CQ9NQ84 441 aa5.38□□□□□ -1.55
VPS50-216ENST00000484954 PDLIM7Q9NR12 457 aa5.38□□□□□ -1.55
VPS50-216ENST00000484954 IGSF5Q9NSI5 407 aa5.38□□□□□ -1.55
VPS50-216ENST00000484954 ACTR10Q9NZ32 417 aa5.38□□□□□ -1.55
VPS50-216ENST00000484954 PRKAG3Q9UGI9 489 aa5.38□□□□□ -1.55
VPS50-216ENST00000484954 RWDD3Q9Y3V2 267 aa5.38□□□□□ -1.55
VPS50-216ENST00000484954 IRS4O14654 1257 aaPredicted RBP5.37□□□□□ -1.55
VPS50-216ENST00000484954 ZNF200P98182 395 aaPredicted RBP5.37□□□□□ -1.55
VPS50-216ENST00000484954 SCRN1Q12765 414 aa5.37□□□□□ -1.55
VPS50-216ENST00000484954 NCAPHQ15003 741 aa5.37□□□□□ -1.55
VPS50-216ENST00000484954 FAM178BQ8IXR5 827 aa5.37□□□□□ -1.55
VPS50-216ENST00000484954 TMEFF1Q8IYR6 380 aa5.37□□□□□ -1.55
VPS50-216ENST00000484954 BVESQ8NE79 360 aa5.37□□□□□ -1.55
VPS50-216ENST00000484954 MZB1Q8WU39 189 aa5.37□□□□□ -1.55
VPS50-216ENST00000484954 PPP1R14AQ96A00 147 aa5.37□□□□□ -1.55
VPS50-216ENST00000484954 APBA2Q99767 749 aa5.37□□□□□ -1.55
VPS50-216ENST00000484954 BCAS3Q9H6U6 928 aa5.37□□□□□ -1.55
VPS50-216ENST00000484954 CLEC1BQ9P126 229 aa5.37□□□□□ -1.55
VPS50-216ENST00000484954 GULP1Q9UBP9 304 aa5.37□□□□□ -1.55
VPS50-216ENST00000484954 PCDHA5Q9Y5H7 936 aa5.37□□□□□ -1.55
VPS50-216ENST00000484954 ZC3H12DA2A288 527 aaKnown RBP5.36□□□□□ -1.55
VPS50-216ENST00000484954 ARNTLO00327 626 aa5.36□□□□□ -1.55
VPS50-216ENST00000484954 ABLIM1O14639 778 aa5.36□□□□□ -1.55
VPS50-216ENST00000484954 SRGAP3O43295 1099 aa5.36□□□□□ -1.55
VPS50-216ENST00000484954 SUV39H1O43463 412 aa5.36□□□□□ -1.55
VPS50-216ENST00000484954 CYBBP04839 570 aa5.36□□□□□ -1.55
VPS50-216ENST00000484954 PLS3P13797 630 aa5.36□□□□□ -1.55
VPS50-216ENST00000484954 FBLN1P23142 703 aa5.36□□□□□ -1.55
VPS50-216ENST00000484954 DNAJA1P31689 397 aaKnown RBP5.36□□□□□ -1.55
VPS50-216ENST00000484954 MAPKAPK2P49137 400 aa5.36□□□□□ -1.55
VPS50-216ENST00000484954 GTF2IRD2BQ6EKJ0 949 aa5.36□□□□□ -1.55
VPS50-216ENST00000484954 GTF2IRD2Q86UP8 949 aa5.36□□□□□ -1.55
VPS50-216ENST00000484954 VPS37DQ86XT2 251 aa5.36□□□□□ -1.55
VPS50-216ENST00000484954 TRIM59Q8IWR1 403 aa5.36□□□□□ -1.55
VPS50-216ENST00000484954 NLGN2Q8NFZ4 835 aa5.36□□□□□ -1.55
VPS50-216ENST00000484954 BTN2A2Q8WVV5 523 aa5.36□□□□□ -1.55
VPS50-216ENST00000484954 COPS5Q92905 334 aa5.36□□□□□ -1.55
VPS50-216ENST00000484954 TEPSINQ96N21 525 aa5.36□□□□□ -1.55
VPS50-216ENST00000484954 MTA3Q9BTC8 594 aa5.36□□□□□ -1.55
VPS50-216ENST00000484954 NPHP3-ACAD11A0A0J9YXS1 232 aa5.35□□□□□ -1.55
VPS50-216ENST00000484954 A0A1W2PQJ5 194 aa5.35□□□□□ -1.55
VPS50-216ENST00000484954 C7orf72A4D263 438 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms