RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 RANBP17Q9H2T7 1088 aaKnown RBP18.89■□□□□ 0.61
CTSA-207ENST00000484855 GGA3Q9NZ52 723 aa18.89■□□□□ 0.61
CTSA-207ENST00000484855 DDX25Q9UHL0 483 aaKnown RBP18.89■□□□□ 0.61
CTSA-207ENST00000484855 IKBKBO14920 756 aa18.88■□□□□ 0.61
CTSA-207ENST00000484855 CASP1P29466 404 aa18.88■□□□□ 0.61
CTSA-207ENST00000484855 TXKP42681 527 aa18.88■□□□□ 0.61
CTSA-207ENST00000484855 TMEM266Q2M3C6 531 aa18.88■□□□□ 0.61
CTSA-207ENST00000484855 RRAGBQ5VZM2 374 aa18.88■□□□□ 0.61
CTSA-207ENST00000484855 CABP7Q86V35 215 aa18.88■□□□□ 0.61
CTSA-207ENST00000484855 DACH1Q9UI36 760 aa18.88■□□□□ 0.61
CTSA-207ENST00000484855 INPP5BP32019 993 aa18.88■□□□□ 0.61
CTSA-207ENST00000484855 EPS15P42566 896 aa18.88■□□□□ 0.61
CTSA-207ENST00000484855 CCDC174Q6PII3 467 aa18.88■□□□□ 0.61
CTSA-207ENST00000484855 ZSCAN30Q86W11 494 aa18.88■□□□□ 0.61
CTSA-207ENST00000484855 STAMQ92783 540 aa18.88■□□□□ 0.61
CTSA-207ENST00000484855 FXR2P51116 673 aaKnown RBP eCLIP18.87■□□□□ 0.61
CTSA-207ENST00000484855 NCAPHQ15003 741 aa18.87■□□□□ 0.61
CTSA-207ENST00000484855 SAMD1Q6SPF0 538 aaPredicted RBP18.87■□□□□ 0.61
CTSA-207ENST00000484855 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.87■□□□□ 0.61
CTSA-207ENST00000484855 IGSF22Q8N9C0 903 aa18.87■□□□□ 0.61
CTSA-207ENST00000484855 MLKLQ8NB16 471 aa18.87■□□□□ 0.61
CTSA-207ENST00000484855 GSDMAQ96QA5 445 aa18.87■□□□□ 0.61
CTSA-207ENST00000484855 SPDYE3A6NKU9 549 aa18.86■□□□□ 0.61
CTSA-207ENST00000484855 GTPBP6O43824 516 aaPredicted RBP18.86■□□□□ 0.61
CTSA-207ENST00000484855 MYL5Q02045 173 aa18.86■□□□□ 0.61
CTSA-207ENST00000484855 SPC24Q8NBT2 197 aa18.86■□□□□ 0.61
CTSA-207ENST00000484855 LPAR1Q92633 364 aa18.86■□□□□ 0.61
CTSA-207ENST00000484855 SYT17Q9BSW7 474 aa18.86■□□□□ 0.61
CTSA-207ENST00000484855 RAB34Q9BZG1 259 aa18.86■□□□□ 0.61
CTSA-207ENST00000484855 KIAA1683Q9H0B3 1180 aa18.86■□□□□ 0.61
CTSA-207ENST00000484855 FBXO28Q9NVF7 368 aa18.86■□□□□ 0.61
CTSA-207ENST00000484855 OPLAHO14841 1288 aa18.86■□□□□ 0.61
CTSA-207ENST00000484855 WDR46O15213 610 aaKnown RBP18.86■□□□□ 0.61
CTSA-207ENST00000484855 FOSP01100 380 aaPredicted RBP18.86■□□□□ 0.61
CTSA-207ENST00000484855 USP11P51784 963 aa18.86■□□□□ 0.61
CTSA-207ENST00000484855 MTRQ99707 1265 aa18.86■□□□□ 0.61
CTSA-207ENST00000484855 RNF181Q9P0P0 153 aa18.86■□□□□ 0.61
CTSA-207ENST00000484855 PHIPQ8WWQ0 1821 aa18.86■□□□□ 0.61
CTSA-207ENST00000484855 GOLGA6L6A8MZA4 724 aa18.85■□□□□ 0.61
CTSA-207ENST00000484855 NAALADL2Q58DX5 795 aa18.85■□□□□ 0.61
CTSA-207ENST00000484855 PRAMEF18Q5VWM3 479 aa18.85■□□□□ 0.61
CTSA-207ENST00000484855 PLIN2Q99541 437 aa18.85■□□□□ 0.61
CTSA-207ENST00000484855 BLZF1Q9H2G9 400 aa18.85■□□□□ 0.61
CTSA-207ENST00000484855 RRAGDQ9NQL2 400 aaPredicted RBP18.85■□□□□ 0.61
CTSA-207ENST00000484855 PPP2R3BQ9Y5P8 575 aa18.85■□□□□ 0.61
CTSA-207ENST00000484855 PARP14Q460N5 1801 aa18.85■□□□□ 0.61
CTSA-207ENST00000484855 PLCG1P19174 1290 aa18.85■□□□□ 0.61
CTSA-207ENST00000484855 HIRAP54198 1017 aaPredicted RBP18.85■□□□□ 0.61
CTSA-207ENST00000484855 CUL4BQ13620 913 aa18.85■□□□□ 0.61
CTSA-207ENST00000484855 DRC7Q8IY82 874 aa18.85■□□□□ 0.61
CTSA-207ENST00000484855 SCYL3Q8IZE3 742 aa18.85■□□□□ 0.61
CTSA-207ENST00000484855 WRNIP1Q96S55 665 aa18.85■□□□□ 0.61
CTSA-207ENST00000484855 P2RX7Q99572 595 aaKnown RBP18.85■□□□□ 0.61
CTSA-207ENST00000484855 CUEDC2Q9H467 287 aa18.85■□□□□ 0.61
CTSA-207ENST00000484855 LRWD1Q9UFC0 647 aa18.85■□□□□ 0.61
CTSA-207ENST00000484855 PIK3CDO00329 1044 aa18.84■□□□□ 0.61
CTSA-207ENST00000484855 MARCH6O60337 910 aa18.84■□□□□ 0.61
CTSA-207ENST00000484855 DDNO94850 711 aaPredicted RBP18.84■□□□□ 0.61
CTSA-207ENST00000484855 MSNP26038 577 aaKnown RBP18.84■□□□□ 0.61
CTSA-207ENST00000484855 CDC25BP30305 580 aa18.84■□□□□ 0.61
CTSA-207ENST00000484855 HOXA13P31271 388 aaPredicted RBP18.84■□□□□ 0.61
CTSA-207ENST00000484855 ARHGAP4P98171 946 aa18.84■□□□□ 0.61
CTSA-207ENST00000484855 MOXD1Q6UVY6 613 aa18.84■□□□□ 0.61
CTSA-207ENST00000484855 MAGEF1Q9HAY2 307 aa18.84■□□□□ 0.61
CTSA-207ENST00000484855 ZNF112Q9UJU3 913 aa18.84■□□□□ 0.61
CTSA-207ENST00000484855 LMOD1P29536 600 aaPredicted RBP18.83■□□□□ 0.61
CTSA-207ENST00000484855 MTMR2Q13614 643 aa18.83■□□□□ 0.61
CTSA-207ENST00000484855 RBBP6Q7Z6E9 1792 aaKnown RBP18.83■□□□□ 0.61
CTSA-207ENST00000484855 TEX2Q8IWB9 1127 aa18.83■□□□□ 0.61
CTSA-207ENST00000484855 CALML4Q96GE6 196 aa18.83■□□□□ 0.61
CTSA-207ENST00000484855 MRFAP1L1Q96HT8 127 aa18.83■□□□□ 0.61
CTSA-207ENST00000484855 MMTAG2Q9BU76 263 aaKnown RBP18.83■□□□□ 0.61
CTSA-207ENST00000484855 TTC12Q9H892 705 aaPredicted RBP18.83■□□□□ 0.61
CTSA-207ENST00000484855 ZKSCAN5Q9Y2L8 839 aa18.83■□□□□ 0.61
CTSA-207ENST00000484855 CYP3A7-CYP3A51PA0A087WV96 503 aa18.83■□□□□ 0.6
CTSA-207ENST00000484855 YBX3P16989 372 aaKnown RBP eCLIP18.83■□□□□ 0.6
CTSA-207ENST00000484855 CYP3A7P24462 503 aa18.83■□□□□ 0.6
CTSA-207ENST00000484855 SREBF1P36956 1147 aa18.83■□□□□ 0.6
CTSA-207ENST00000484855 PDIA5Q14554 519 aa18.83■□□□□ 0.6
CTSA-207ENST00000484855 CRYGNQ8WXF5 182 aa18.83■□□□□ 0.6
CTSA-207ENST00000484855 HAS1Q92839 578 aa18.83■□□□□ 0.6
CTSA-207ENST00000484855 SLF1Q9BQI6 1058 aa18.83■□□□□ 0.6
CTSA-207ENST00000484855 PICK1Q9NRD5 415 aa18.83■□□□□ 0.6
CTSA-207ENST00000484855 MRPL11Q9Y3B7 192 aaKnown RBP18.83■□□□□ 0.6
CTSA-207ENST00000484855 SSC5DA1L4H1 1573 aa18.83■□□□□ 0.6
CTSA-207ENST00000484855 ABCB11O95342 1321 aa18.82■□□□□ 0.6
CTSA-207ENST00000484855 POTEMA6NI47 508 aa18.82■□□□□ 0.6
CTSA-207ENST00000484855 USP14P54578 494 aa18.82■□□□□ 0.6
CTSA-207ENST00000484855 DGKZQ13574 1117 aa18.82■□□□□ 0.6
CTSA-207ENST00000484855 LRRC15Q8TF66 581 aa18.82■□□□□ 0.6
CTSA-207ENST00000484855 ZKSCAN4Q969J2 545 aaPredicted RBP18.82■□□□□ 0.6
CTSA-207ENST00000484855 MBOAT7Q96N66 472 aa18.82■□□□□ 0.6
CTSA-207ENST00000484855 AS3MTQ9HBK9 375 aa18.82■□□□□ 0.6
CTSA-207ENST00000484855 RTN4Q9NQC3 1192 aaKnown RBP18.82■□□□□ 0.6
CTSA-207ENST00000484855 RMND1Q9NWS8 449 aa18.82■□□□□ 0.6
CTSA-207ENST00000484855 PITPNM2Q9BZ72 1349 aa18.82■□□□□ 0.6
CTSA-207ENST00000484855 CFBP00751 764 aa18.82■□□□□ 0.6
CTSA-207ENST00000484855 MYL1P05976 194 aa18.82■□□□□ 0.6
CTSA-207ENST00000484855 LDHDQ86WU2 507 aa18.82■□□□□ 0.6
CTSA-207ENST00000484855 PRPF38AQ8NAV1 312 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms