RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 PCSK9Q8NBP7 692 aaKnown RBP12.23□□□□□ -0.45
CPSF4-212ENST00000482251 ANKS1AQ92625 1134 aa12.23□□□□□ -0.45
CPSF4-212ENST00000482251 VTA1Q9NP79 307 aa12.23□□□□□ -0.45
CPSF4-212ENST00000482251 TMEM39AQ9NV64 488 aa12.23□□□□□ -0.45
CPSF4-212ENST00000482251 ADD3Q9UEY8 706 aaKnown RBP12.23□□□□□ -0.45
CPSF4-212ENST00000482251 GNEQ9Y223 722 aaKnown RBP12.23□□□□□ -0.45
CPSF4-212ENST00000482251 U3KPZ7 1027 aaPredicted RBP12.23□□□□□ -0.45
CPSF4-212ENST00000482251 A0A0U1RQG5 324 aaPredicted RBP12.22□□□□□ -0.45
CPSF4-212ENST00000482251 E7EWF7 191 aa12.22□□□□□ -0.45
CPSF4-212ENST00000482251 IFIT3O14879 490 aaKnown RBP12.22□□□□□ -0.45
CPSF4-212ENST00000482251 RAG1P15918 1043 aa12.22□□□□□ -0.45
CPSF4-212ENST00000482251 NT5C2P49902 561 aa12.22□□□□□ -0.45
CPSF4-212ENST00000482251 PSMC6P62333 389 aa12.22□□□□□ -0.45
CPSF4-212ENST00000482251 PDE4DQ08499 809 aa12.22□□□□□ -0.45
CPSF4-212ENST00000482251 FAAP100Q0VG06 881 aa12.22□□□□□ -0.45
CPSF4-212ENST00000482251 SHHQ15465 462 aa12.22□□□□□ -0.45
CPSF4-212ENST00000482251 LRIT3Q3SXY7 679 aa12.22□□□□□ -0.45
CPSF4-212ENST00000482251 HOMER1Q86YM7 354 aa12.22□□□□□ -0.45
CPSF4-212ENST00000482251 TBC1D5Q92609 795 aa12.22□□□□□ -0.45
CPSF4-212ENST00000482251 AP5M1Q9H0R1 490 aa12.22□□□□□ -0.45
CPSF4-212ENST00000482251 JMJD4Q9H9V9 463 aa12.22□□□□□ -0.45
CPSF4-212ENST00000482251 RBM8AQ9Y5S9 174 aaKnown RBP12.22□□□□□ -0.45
CPSF4-212ENST00000482251 ABCB11O95342 1321 aa12.21□□□□□ -0.45
CPSF4-212ENST00000482251 DCDC2CA8MYV0 355 aa12.21□□□□□ -0.45
CPSF4-212ENST00000482251 ANKRD33Q7Z3H0 272 aa12.21□□□□□ -0.45
CPSF4-212ENST00000482251 FBXO11Q86XK2 927 aa12.21□□□□□ -0.45
CPSF4-212ENST00000482251 NCOA7Q8NI08 942 aa12.21□□□□□ -0.45
CPSF4-212ENST00000482251 MORC4Q8TE76 937 aa12.21□□□□□ -0.45
CPSF4-212ENST00000482251 WDR11Q9BZH6 1224 aa12.21□□□□□ -0.45
CPSF4-212ENST00000482251 PPP1R12CQ9BZL4 782 aa12.21□□□□□ -0.45
CPSF4-212ENST00000482251 COL20A1Q9P218 1284 aa12.21□□□□□ -0.45
CPSF4-212ENST00000482251 MAD2L2Q9UI95 211 aa12.21□□□□□ -0.45
CPSF4-212ENST00000482251 PNMA2Q9UL42 364 aa12.21□□□□□ -0.45
CPSF4-212ENST00000482251 LAMA2P24043 3122 aaKnown RBP12.21□□□□□ -0.46
CPSF4-212ENST00000482251 ELP1O95163 1332 aa12.2□□□□□ -0.46
CPSF4-212ENST00000482251 MROH7Q68CQ1 1323 aa12.2□□□□□ -0.46
CPSF4-212ENST00000482251 ERICH2A1L162 156 aa12.2□□□□□ -0.46
CPSF4-212ENST00000482251 KLRF2D3W0D1 207 aa12.2□□□□□ -0.46
CPSF4-212ENST00000482251 ARVCFO00192 962 aa12.2□□□□□ -0.46
CPSF4-212ENST00000482251 KIAA0355O15063 1070 aa12.2□□□□□ -0.46
CPSF4-212ENST00000482251 PPP1R11O60927 126 aaPredicted RBP12.2□□□□□ -0.46
CPSF4-212ENST00000482251 EPHB4P54760 987 aa12.2□□□□□ -0.46
CPSF4-212ENST00000482251 ANTXR2P58335 489 aa12.2□□□□□ -0.46
CPSF4-212ENST00000482251 COL9A3Q14050 684 aaPredicted RBP12.2□□□□□ -0.46
CPSF4-212ENST00000482251 WTAPQ15007 396 aa12.2□□□□□ -0.46
CPSF4-212ENST00000482251 PPP2R5BQ15173 497 aa12.2□□□□□ -0.46
CPSF4-212ENST00000482251 SLC35G1Q2M3R5 365 aa12.2□□□□□ -0.46
CPSF4-212ENST00000482251 TMEM67Q5HYA8 995 aa12.2□□□□□ -0.46
CPSF4-212ENST00000482251 IQSEC1Q6DN90 963 aa12.2□□□□□ -0.46
CPSF4-212ENST00000482251 DEFB123Q8N688 67 aa12.2□□□□□ -0.46
CPSF4-212ENST00000482251 OR6J1Q8NGC5 347 aa12.2□□□□□ -0.46
CPSF4-212ENST00000482251 PPP1R13LQ8WUF5 828 aa12.2□□□□□ -0.46
CPSF4-212ENST00000482251 PIBF1Q8WXW3 757 aa12.2□□□□□ -0.46
CPSF4-212ENST00000482251 COPS5Q92905 334 aa12.2□□□□□ -0.46
CPSF4-212ENST00000482251 MYL10Q9BUA6 226 aa12.2□□□□□ -0.46
CPSF4-212ENST00000482251 GPHNQ9NQX3 736 aaPredicted RBP12.2□□□□□ -0.46
CPSF4-212ENST00000482251 ARIH2O95376 493 aa12.19□□□□□ -0.46
CPSF4-212ENST00000482251 CFBP00751 764 aa12.19□□□□□ -0.46
CPSF4-212ENST00000482251 MYL3P08590 195 aa12.19□□□□□ -0.46
CPSF4-212ENST00000482251 EIF2AK2P19525 551 aaKnown RBP12.19□□□□□ -0.46
CPSF4-212ENST00000482251 EDNRBP24530 442 aa12.19□□□□□ -0.46
CPSF4-212ENST00000482251 FPGSQ05932 587 aa12.19□□□□□ -0.46
CPSF4-212ENST00000482251 GRM4Q14833 912 aa12.19□□□□□ -0.46
CPSF4-212ENST00000482251 SART3Q15020 963 aaKnown RBP12.19□□□□□ -0.46
CPSF4-212ENST00000482251 DUSP28Q4G0W2 176 aa12.19□□□□□ -0.46
CPSF4-212ENST00000482251 CENPQQ7L2Z9 268 aaPredicted RBP12.19□□□□□ -0.46
CPSF4-212ENST00000482251 FAM126BQ8IXS8 530 aa12.19□□□□□ -0.46
CPSF4-212ENST00000482251 MB21D2Q8IYB1 491 aaPredicted RBP12.19□□□□□ -0.46
CPSF4-212ENST00000482251 DNERQ8NFT8 737 aa12.19□□□□□ -0.46
CPSF4-212ENST00000482251 SYTL5Q8TDW5 730 aaPredicted RBP12.19□□□□□ -0.46
CPSF4-212ENST00000482251 MAP4K1Q92918 833 aa12.19□□□□□ -0.46
CPSF4-212ENST00000482251 FAM161BQ96MY7 647 aa12.19□□□□□ -0.46
CPSF4-212ENST00000482251 TOX2Q96NM4 488 aa12.19□□□□□ -0.46
CPSF4-212ENST00000482251 TAAR1Q96RJ0 339 aa12.19□□□□□ -0.46
CPSF4-212ENST00000482251 MPHOSPH6Q99547 160 aaKnown RBP12.19□□□□□ -0.46
CPSF4-212ENST00000482251 ESYT1Q9BSJ8 1104 aa12.19□□□□□ -0.46
CPSF4-212ENST00000482251 LSG1Q9H089 658 aaKnown RBP12.19□□□□□ -0.46
CPSF4-212ENST00000482251 ANO2Q9NQ90 1003 aa12.19□□□□□ -0.46
CPSF4-212ENST00000482251 TBX21Q9UL17 535 aa12.19□□□□□ -0.46
CPSF4-212ENST00000482251 OPLAHO14841 1288 aa12.18□□□□□ -0.46
CPSF4-212ENST00000482251 ZBTB5O15062 677 aa12.18□□□□□ -0.46
CPSF4-212ENST00000482251 ZEB2O60315 1214 aa12.18□□□□□ -0.46
CPSF4-212ENST00000482251 CDK7P50613 346 aa12.18□□□□□ -0.46
CPSF4-212ENST00000482251 NKX3-2P78367 333 aa12.18□□□□□ -0.46
CPSF4-212ENST00000482251 ITGA7Q13683 1181 aa12.18□□□□□ -0.46
CPSF4-212ENST00000482251 SEPT14Q6ZU15 432 aa12.18□□□□□ -0.46
CPSF4-212ENST00000482251 MCF2L2Q86YR7 1114 aa12.18□□□□□ -0.46
CPSF4-212ENST00000482251 RAB11FIP4Q86YS3 637 aa12.18□□□□□ -0.46
CPSF4-212ENST00000482251 RNPC3Q96LT9 517 aaKnown RBP12.18□□□□□ -0.46
CPSF4-212ENST00000482251 PIGSQ96S52 555 aa12.18□□□□□ -0.46
CPSF4-212ENST00000482251 AMNQ9BXJ7 453 aa12.18□□□□□ -0.46
CPSF4-212ENST00000482251 MRPL11Q9Y3B7 192 aaKnown RBP12.18□□□□□ -0.46
CPSF4-212ENST00000482251 GRIN2DO15399 1336 aa12.17□□□□□ -0.46
CPSF4-212ENST00000482251 UMODL1Q5DID0 1318 aa12.17□□□□□ -0.46
CPSF4-212ENST00000482251 LOC102724159A0A0B4J2E5 919 aa12.17□□□□□ -0.46
CPSF4-212ENST00000482251 PALM3A6NDB9 673 aaPredicted RBP12.17□□□□□ -0.46
CPSF4-212ENST00000482251 SLC27A2O14975 620 aa12.17□□□□□ -0.46
CPSF4-212ENST00000482251 TLR3O15455 904 aaKnown RBP12.17□□□□□ -0.46
CPSF4-212ENST00000482251 PRC1O43663 620 aa12.17□□□□□ -0.46
CPSF4-212ENST00000482251 B4GALT4O60513 344 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms