RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 GPATCH4Q5T3I0 446 aaKnown RBP17.87■□□□□ 0.45
LIMS3-203ENST00000480744 MFSD5Q6N075 450 aa17.87■□□□□ 0.45
LIMS3-203ENST00000480744 DGKHQ86XP1 1220 aa17.87■□□□□ 0.45
LIMS3-203ENST00000480744 PNMA1Q8ND90 353 aa17.87■□□□□ 0.45
LIMS3-203ENST00000480744 MORC4Q8TE76 937 aa17.87■□□□□ 0.45
LIMS3-203ENST00000480744 CLEC4DQ8WXI8 215 aa17.87■□□□□ 0.45
LIMS3-203ENST00000480744 SEMA6BQ9H3T3 888 aa17.87■□□□□ 0.45
LIMS3-203ENST00000480744 DLL1O00548 723 aa17.86■□□□□ 0.45
LIMS3-203ENST00000480744 PDE4DQ08499 809 aa17.86■□□□□ 0.45
LIMS3-203ENST00000480744 ITGA7Q13683 1181 aa17.86■□□□□ 0.45
LIMS3-203ENST00000480744 TMEM199Q8N511 208 aa17.86■□□□□ 0.45
LIMS3-203ENST00000480744 ZSCAN10Q96SZ4 725 aaPredicted RBP17.86■□□□□ 0.45
LIMS3-203ENST00000480744 MPHOSPH6Q99547 160 aaKnown RBP17.86■□□□□ 0.45
LIMS3-203ENST00000480744 CDX2Q99626 313 aaPredicted RBP17.86■□□□□ 0.45
LIMS3-203ENST00000480744 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.86■□□□□ 0.45
LIMS3-203ENST00000480744 DSCC1Q9BVC3 393 aa17.86■□□□□ 0.45
LIMS3-203ENST00000480744 WDR11Q9BZH6 1224 aa17.86■□□□□ 0.45
LIMS3-203ENST00000480744 CTNNA3Q9UI47 895 aa17.86■□□□□ 0.45
LIMS3-203ENST00000480744 Q9Y3F1 56 aa17.86■□□□□ 0.45
LIMS3-203ENST00000480744 SUPT16HQ9Y5B9 1047 aaKnown RBP17.86■□□□□ 0.45
LIMS3-203ENST00000480744 WDR19Q8NEZ3 1342 aa17.86■□□□□ 0.45
LIMS3-203ENST00000480744 DHX16O60231 1041 aaKnown RBP17.85■□□□□ 0.45
LIMS3-203ENST00000480744 CSF2RAP15509 400 aa17.85■□□□□ 0.45
LIMS3-203ENST00000480744 CYP2C18P33260 490 aa17.85■□□□□ 0.45
LIMS3-203ENST00000480744 PSMC6P62333 389 aa17.85■□□□□ 0.45
LIMS3-203ENST00000480744 RPS6P62753 249 aaKnown RBP17.85■□□□□ 0.45
LIMS3-203ENST00000480744 DUSP28Q4G0W2 176 aa17.85■□□□□ 0.45
LIMS3-203ENST00000480744 TTYH1Q9H313 450 aaPredicted RBP17.85■□□□□ 0.45
LIMS3-203ENST00000480744 TNKSO95271 1327 aa17.84■□□□□ 0.45
LIMS3-203ENST00000480744 LOC102724159A0A0B4J2E5 919 aa17.84■□□□□ 0.45
LIMS3-203ENST00000480744 CD4P01730 458 aa17.84■□□□□ 0.45
LIMS3-203ENST00000480744 ACRP10323 421 aa17.84■□□□□ 0.45
LIMS3-203ENST00000480744 NT5C2P49902 561 aa17.84■□□□□ 0.45
LIMS3-203ENST00000480744 PWP2Q15269 919 aaKnown RBP17.84■□□□□ 0.45
LIMS3-203ENST00000480744 CDC37Q16543 378 aaPredicted RBP17.84■□□□□ 0.45
LIMS3-203ENST00000480744 ENAHQ8N8S7 591 aaPredicted RBP17.84■□□□□ 0.45
LIMS3-203ENST00000480744 SLC43A3Q8NBI5 491 aa17.84■□□□□ 0.45
LIMS3-203ENST00000480744 OR6J1Q8NGC5 347 aa17.84■□□□□ 0.45
LIMS3-203ENST00000480744 KRT23Q9C075 422 aa17.84■□□□□ 0.45
LIMS3-203ENST00000480744 ZSWIM5Q9P217 1185 aa17.84■□□□□ 0.45
LIMS3-203ENST00000480744 GRIN2DO15399 1336 aa17.83■□□□□ 0.44
LIMS3-203ENST00000480744 KIAA1217Q5T5P2 1943 aa17.83■□□□□ 0.44
LIMS3-203ENST00000480744 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.83■□□□□ 0.44
LIMS3-203ENST00000480744 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.83■□□□□ 0.44
LIMS3-203ENST00000480744 MYL3P08590 195 aa17.83■□□□□ 0.44
LIMS3-203ENST00000480744 PDE4AP27815 886 aa17.83■□□□□ 0.44
LIMS3-203ENST00000480744 MYLIPQ8WY64 445 aa17.83■□□□□ 0.44
LIMS3-203ENST00000480744 UBAC1Q9BSL1 405 aa17.83■□□□□ 0.44
LIMS3-203ENST00000480744 TRPV6Q9H1D0 765 aa17.83■□□□□ 0.44
LIMS3-203ENST00000480744 HIPK3Q9H422 1215 aa17.83■□□□□ 0.44
LIMS3-203ENST00000480744 GBF1Q92538 1859 aa17.83■□□□□ 0.44
LIMS3-203ENST00000480744 B4DLN1 442 aa17.82■□□□□ 0.44
LIMS3-203ENST00000480744 PARP1P09874 1014 aaKnown RBP17.82■□□□□ 0.44
LIMS3-203ENST00000480744 CPT1AP50416 773 aa17.82■□□□□ 0.44
LIMS3-203ENST00000480744 MRPL12P52815 198 aaKnown RBP17.82■□□□□ 0.44
LIMS3-203ENST00000480744 IRX6P78412 446 aaPredicted RBP17.82■□□□□ 0.44
LIMS3-203ENST00000480744 PPP2R5BQ15173 497 aa17.82■□□□□ 0.44
LIMS3-203ENST00000480744 ASPRV1Q53RT3 343 aa17.82■□□□□ 0.44
LIMS3-203ENST00000480744 TMEM240Q5SV17 173 aa17.82■□□□□ 0.44
LIMS3-203ENST00000480744 TTC22Q5TAA0 569 aa17.82■□□□□ 0.44
LIMS3-203ENST00000480744 C16orf59Q7L2K0 433 aa17.82■□□□□ 0.44
LIMS3-203ENST00000480744 ADGRF4Q8IZF3 695 aa17.82■□□□□ 0.44
LIMS3-203ENST00000480744 DNERQ8NFT8 737 aa17.82■□□□□ 0.44
LIMS3-203ENST00000480744 ANKS1AQ92625 1134 aa17.82■□□□□ 0.44
LIMS3-203ENST00000480744 IL25Q9H293 177 aa17.82■□□□□ 0.44
LIMS3-203ENST00000480744 CNNM2Q9H8M5 875 aa17.82■□□□□ 0.44
LIMS3-203ENST00000480744 VAT1LQ9HCJ6 419 aa17.82■□□□□ 0.44
LIMS3-203ENST00000480744 POLR3EQ9NVU0 708 aa17.82■□□□□ 0.44
LIMS3-203ENST00000480744 ABCB11O95342 1321 aa17.81■□□□□ 0.44
LIMS3-203ENST00000480744 UMODL1Q5DID0 1318 aa17.81■□□□□ 0.44
LIMS3-203ENST00000480744 RBM47A0AV96 593 aaKnown RBP17.81■□□□□ 0.44
LIMS3-203ENST00000480744 B4GALT4O60513 344 aa17.81■□□□□ 0.44
LIMS3-203ENST00000480744 GSPT1P15170 499 aaKnown RBP17.81■□□□□ 0.44
LIMS3-203ENST00000480744 DNAJB2P25686 324 aa17.81■□□□□ 0.44
LIMS3-203ENST00000480744 CCL23P55773 120 aa17.81■□□□□ 0.44
LIMS3-203ENST00000480744 IFIT1BQ5T764 474 aaKnown RBP17.81■□□□□ 0.44
LIMS3-203ENST00000480744 PSRC1Q6PGN9 363 aaPredicted RBP17.81■□□□□ 0.44
LIMS3-203ENST00000480744 ZNF365Q70YC5 407 aa17.81■□□□□ 0.44
LIMS3-203ENST00000480744 SCFD2Q8WU76 684 aa17.81■□□□□ 0.44
LIMS3-203ENST00000480744 SEZ6LQ9BYH1 1024 aa17.81■□□□□ 0.44
LIMS3-203ENST00000480744 GPHNQ9NQX3 736 aaPredicted RBP17.81■□□□□ 0.44
LIMS3-203ENST00000480744 RAD50Q92878 1312 aa17.8■□□□□ 0.44
LIMS3-203ENST00000480744 TMEM265A0A087WTH1 108 aa17.8■□□□□ 0.44
LIMS3-203ENST00000480744 TXNP10599 105 aaKnown RBP17.8■□□□□ 0.44
LIMS3-203ENST00000480744 FOSL2P15408 326 aa17.8■□□□□ 0.44
LIMS3-203ENST00000480744 EDNRBP24530 442 aa17.8■□□□□ 0.44
LIMS3-203ENST00000480744 QRICH1Q2TAL8 776 aa17.8■□□□□ 0.44
LIMS3-203ENST00000480744 BRDTQ58F21 947 aaPredicted RBP17.8■□□□□ 0.44
LIMS3-203ENST00000480744 MAFAQ8NHW3 353 aaPredicted RBP17.8■□□□□ 0.44
LIMS3-203ENST00000480744 TBC1D5Q92609 795 aa17.8■□□□□ 0.44
LIMS3-203ENST00000480744 COPS5Q92905 334 aa17.8■□□□□ 0.44
LIMS3-203ENST00000480744 NOC4LQ9BVI4 516 aaKnown RBP17.8■□□□□ 0.44
LIMS3-203ENST00000480744 IL23AQ9NPF7 189 aa17.8■□□□□ 0.44
LIMS3-203ENST00000480744 SCN10AQ9Y5Y9 1956 aa17.8■□□□□ 0.44
LIMS3-203ENST00000480744 MYO9BQ13459 2157 aa17.8■□□□□ 0.44
LIMS3-203ENST00000480744 MYH7BA7E2Y1 1941 aa17.8■□□□□ 0.44
LIMS3-203ENST00000480744 SCN5AQ14524 2016 aa17.79■□□□□ 0.44
LIMS3-203ENST00000480744 GRXCR1A8MXD5 290 aa17.79■□□□□ 0.44
LIMS3-203ENST00000480744 NKRFO15226 690 aaKnown RBP eCLIP17.79■□□□□ 0.44
LIMS3-203ENST00000480744 PURAQ00577 322 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms