RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 MYL7Q01449 175 aa10.38□□□□□ -0.75
VEGFA-212ENST00000480614 TEX12Q9BXU0 123 aa10.38□□□□□ -0.75
VEGFA-212ENST00000480614 GPC4O75487 556 aa10.38□□□□□ -0.75
VEGFA-212ENST00000480614 RPN1P04843 607 aaKnown RBP10.38□□□□□ -0.75
VEGFA-212ENST00000480614 BANK1Q8NDB2 785 aa10.38□□□□□ -0.75
VEGFA-212ENST00000480614 RNF14Q9UBS8 474 aa10.38□□□□□ -0.75
VEGFA-212ENST00000480614 METTL23Q86XA0 190 aa10.38□□□□□ -0.75
VEGFA-212ENST00000480614 EEF1GP26641 437 aaKnown RBP10.38□□□□□ -0.75
VEGFA-212ENST00000480614 POLGP54098 1239 aaPredicted RBP10.38□□□□□ -0.75
VEGFA-212ENST00000480614 GNGT1P63211 74 aa10.38□□□□□ -0.75
VEGFA-212ENST00000480614 ASPRV1Q53RT3 343 aa10.38□□□□□ -0.75
VEGFA-212ENST00000480614 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.38□□□□□ -0.75
VEGFA-212ENST00000480614 TCOF1Q13428 1488 aaKnown RBP10.38□□□□□ -0.75
VEGFA-212ENST00000480614 RABGGTAQ92696 567 aa10.38□□□□□ -0.75
VEGFA-212ENST00000480614 CPP00450 1065 aa10.38□□□□□ -0.75
VEGFA-212ENST00000480614 PYGLP06737 847 aa10.38□□□□□ -0.75
VEGFA-212ENST00000480614 NT5C2P49902 561 aa10.38□□□□□ -0.75
VEGFA-212ENST00000480614 TIMM10P62072 90 aa10.38□□□□□ -0.75
VEGFA-212ENST00000480614 NVLO15381 856 aaKnown RBP10.38□□□□□ -0.75
VEGFA-212ENST00000480614 XPO4Q9C0E2 1151 aaKnown RBP10.38□□□□□ -0.75
VEGFA-212ENST00000480614 MED7O43513 233 aa10.38□□□□□ -0.75
VEGFA-212ENST00000480614 XKR9Q5GH70 373 aa10.38□□□□□ -0.75
VEGFA-212ENST00000480614 GCP02774 474 aa10.38□□□□□ -0.75
VEGFA-212ENST00000480614 SURF1Q15526 300 aa10.38□□□□□ -0.75
VEGFA-212ENST00000480614 TEKT3Q9BXF9 490 aa10.38□□□□□ -0.75
VEGFA-212ENST00000480614 CAPS2Q9BXY5 557 aa10.38□□□□□ -0.75
VEGFA-212ENST00000480614 TRIM15Q9C019 465 aa10.38□□□□□ -0.75
VEGFA-212ENST00000480614 SNX14Q9Y5W7 946 aa10.38□□□□□ -0.75
VEGFA-212ENST00000480614 E7EWF7 191 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 H7C0C1 242 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 ATP5OP48047 213 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 AK8Q96MA6 479 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 KNL1Q8NG31 2342 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 DYMQ7RTS9 669 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 EYA1Q99502 592 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 USP40Q9NVE5 1235 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 SYNMO15061 1565 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 PPIP5K2O43314 1243 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 CDC25BP30305 580 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 ANKRD36BP1Q96IX9 119 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 NUB1Q9Y5A7 615 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 TFAP4Q01664 338 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 RSRC2Q7L4I2 434 aaKnown RBP10.37□□□□□ -0.75
VEGFA-212ENST00000480614 NELFCDQ8IXH7 590 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 DHTKD1Q96HY7 919 aaPredicted RBP10.37□□□□□ -0.75
VEGFA-212ENST00000480614 PSMB7Q99436 277 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 SNX25Q9H3E2 840 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 SPECC1L-ADORA2AF8WAN1 911 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 PTK2Q05397 1052 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 SEPT2Q15019 361 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 CTSWP56202 376 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 TMEM247A6NEH6 219 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 GSTA4O15217 222 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 CTDSPL2Q05D32 466 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 LONRF3Q496Y0 759 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 PPARGP37231 505 aaPredicted RBP10.37□□□□□ -0.75
VEGFA-212ENST00000480614 PDE1BQ01064 536 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 VPS54Q9P1Q0 977 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 hCG_1984214I3L0E3 225 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 GCFC2P16383 781 aaKnown RBP10.37□□□□□ -0.75
VEGFA-212ENST00000480614 EP400NLQ6ZTU2 488 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 CALR3Q96L12 384 aaKnown RBP10.37□□□□□ -0.75
VEGFA-212ENST00000480614 NLRC4Q9NPP4 1024 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 YWHAGP61981 247 aaKnown RBP eCLIP10.37□□□□□ -0.75
VEGFA-212ENST00000480614 C4orf50Q6ZRC1 276 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 FGFR1OP2Q9NVK5 253 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 PCDHB4Q9Y5E5 795 aa10.37□□□□□ -0.75
VEGFA-212ENST00000480614 MYOM2P54296 1465 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 TESPA1A2RU30 521 aaPredicted RBP10.36□□□□□ -0.75
VEGFA-212ENST00000480614 LRRD1A4D1F6 860 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 SCG2P13521 617 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 ZYXQ15942 572 aaKnown RBP10.36□□□□□ -0.75
VEGFA-212ENST00000480614 MAPKAPK5Q8IW41 473 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 BTG4Q9NY30 223 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 A0A1W2PQ27 194 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 A0A1W2PQ64 194 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 A0A1W2PQD8 194 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 ALCAMQ13740 583 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 GPATCH4Q5T3I0 446 aaKnown RBP10.36□□□□□ -0.75
VEGFA-212ENST00000480614 MYSM1Q5VVJ2 828 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 TEKT2Q9UIF3 430 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 ANGPTL2Q9UKU9 493 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 MYO1FO00160 1098 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 HGSO14964 777 aaPredicted RBP10.36□□□□□ -0.75
VEGFA-212ENST00000480614 DBNDD2Q9BQY9 259 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 SLC8A2Q9UPR5 921 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 CHL1O00533 1208 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 SEMA3EO15041 775 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 SCYL2Q6P3W7 929 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 GCNAQ96QF7 691 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 MAP3K19Q56UN5 1328 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 ABCB4P21439 1286 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 SPATA1Q5VX52 437 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 TRIM68Q6AZZ1 485 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 ZNF408Q9H9D4 720 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 ZNF148Q9UQR1 794 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 KRT39Q6A163 491 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 PFKFB1P16118 471 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 PDE6AP16499 860 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 GCKP35557 465 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms