RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 MYH7BA7E2Y1 1941 aa20.37■□□□□ 0.85
ECHDC1-216ENST00000479525 A0A0U1RQG5 324 aaPredicted RBP20.36■□□□□ 0.85
ECHDC1-216ENST00000479525 ARVCFO00192 962 aa20.36■□□□□ 0.85
ECHDC1-216ENST00000479525 DHX16O60231 1041 aaKnown RBP20.36■□□□□ 0.85
ECHDC1-216ENST00000479525 DGKHQ86XP1 1220 aa20.36■□□□□ 0.85
ECHDC1-216ENST00000479525 ADGRF4Q8IZF3 695 aa20.36■□□□□ 0.85
ECHDC1-216ENST00000479525 STAG2Q8N3U4 1231 aa20.36■□□□□ 0.85
ECHDC1-216ENST00000479525 AP5M1Q9H0R1 490 aa20.36■□□□□ 0.85
ECHDC1-216ENST00000479525 SCN5AQ14524 2016 aa20.36■□□□□ 0.85
ECHDC1-216ENST00000479525 CDH23Q9H251 3354 aa20.36■□□□□ 0.85
ECHDC1-216ENST00000479525 CDK7P50613 346 aa20.35■□□□□ 0.85
ECHDC1-216ENST00000479525 FPGSQ05932 587 aa20.35■□□□□ 0.85
ECHDC1-216ENST00000479525 CHST3Q7LGC8 479 aa20.35■□□□□ 0.85
ECHDC1-216ENST00000479525 RNPC3Q96LT9 517 aaKnown RBP20.35■□□□□ 0.85
ECHDC1-216ENST00000479525 SENP2Q9HC62 589 aa20.35■□□□□ 0.85
ECHDC1-216ENST00000479525 TBX21Q9UL17 535 aa20.35■□□□□ 0.85
ECHDC1-216ENST00000479525 GRIN2DO15399 1336 aa20.35■□□□□ 0.85
ECHDC1-216ENST00000479525 ELP1O95163 1332 aa20.35■□□□□ 0.85
ECHDC1-216ENST00000479525 UMODL1Q5DID0 1318 aa20.35■□□□□ 0.85
ECHDC1-216ENST00000479525 ACRP10323 421 aa20.34■□□□□ 0.85
ECHDC1-216ENST00000479525 CHMLP26374 656 aa20.34■□□□□ 0.85
ECHDC1-216ENST00000479525 FAM126BQ8IXS8 530 aa20.34■□□□□ 0.85
ECHDC1-216ENST00000479525 GUCD1Q96NT3 240 aa20.34■□□□□ 0.85
ECHDC1-216ENST00000479525 WDR11Q9BZH6 1224 aa20.34■□□□□ 0.85
ECHDC1-216ENST00000479525 VTA1Q9NP79 307 aa20.34■□□□□ 0.85
ECHDC1-216ENST00000479525 CYP2C18P33260 490 aa20.34■□□□□ 0.85
ECHDC1-216ENST00000479525 PDE4DQ08499 809 aa20.34■□□□□ 0.85
ECHDC1-216ENST00000479525 QRICH1Q2TAL8 776 aa20.34■□□□□ 0.85
ECHDC1-216ENST00000479525 GPATCH4Q5T3I0 446 aaKnown RBP20.34■□□□□ 0.85
ECHDC1-216ENST00000479525 IQSEC1Q6DN90 963 aa20.34■□□□□ 0.85
ECHDC1-216ENST00000479525 FAM109BQ6ICB4 259 aaPredicted RBP20.34■□□□□ 0.85
ECHDC1-216ENST00000479525 MORC4Q8TE76 937 aa20.34■□□□□ 0.85
ECHDC1-216ENST00000479525 TOX2Q96NM4 488 aa20.34■□□□□ 0.85
ECHDC1-216ENST00000479525 UBAC1Q9BSL1 405 aa20.34■□□□□ 0.85
ECHDC1-216ENST00000479525 KRT23Q9C075 422 aa20.34■□□□□ 0.85
ECHDC1-216ENST00000479525 COL20A1Q9P218 1284 aa20.34■□□□□ 0.85
ECHDC1-216ENST00000479525 ADD3Q9UEY8 706 aaKnown RBP20.34■□□□□ 0.85
ECHDC1-216ENST00000479525 CTNNA3Q9UI47 895 aa20.34■□□□□ 0.85
ECHDC1-216ENST00000479525 WDR19Q8NEZ3 1342 aa20.33■□□□□ 0.84
ECHDC1-216ENST00000479525 TIMP1P01033 207 aa20.33■□□□□ 0.84
ECHDC1-216ENST00000479525 MYL3P08590 195 aa20.33■□□□□ 0.84
ECHDC1-216ENST00000479525 CYP21A2P08686 494 aa20.33■□□□□ 0.84
ECHDC1-216ENST00000479525 PARP1P09874 1014 aaKnown RBP20.33■□□□□ 0.84
ECHDC1-216ENST00000479525 CSF2RAP15509 400 aa20.33■□□□□ 0.84
ECHDC1-216ENST00000479525 ITGA7Q13683 1181 aa20.33■□□□□ 0.84
ECHDC1-216ENST00000479525 IFIT1BQ5T764 474 aaKnown RBP20.33■□□□□ 0.84
ECHDC1-216ENST00000479525 GPR153Q6NV75 609 aa20.33■□□□□ 0.84
ECHDC1-216ENST00000479525 SLC17A8Q8NDX2 589 aa20.33■□□□□ 0.84
ECHDC1-216ENST00000479525 OR6J1Q8NGC5 347 aa20.33■□□□□ 0.84
ECHDC1-216ENST00000479525 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.33■□□□□ 0.847e-6■■■■□ 21.2
ECHDC1-216ENST00000479525 TRPV6Q9H1D0 765 aa20.33■□□□□ 0.84
ECHDC1-216ENST00000479525 JMJD4Q9H9V9 463 aa20.33■□□□□ 0.84
ECHDC1-216ENST00000479525 ARIH2O95376 493 aa20.32■□□□□ 0.84
ECHDC1-216ENST00000479525 SEC23AQ15436 765 aa20.32■□□□□ 0.84
ECHDC1-216ENST00000479525 ZNF697Q5TEC3 545 aa20.32■□□□□ 0.84
ECHDC1-216ENST00000479525 STOX1Q6ZVD7 989 aa20.32■□□□□ 0.84
ECHDC1-216ENST00000479525 ANKS1AQ92625 1134 aa20.32■□□□□ 0.84
ECHDC1-216ENST00000479525 TAAR1Q96RJ0 339 aa20.32■□□□□ 0.84
ECHDC1-216ENST00000479525 DOCK5Q9H7D0 1870 aa20.31■□□□□ 0.84
ECHDC1-216ENST00000479525 MROH7Q68CQ1 1323 aa20.31■□□□□ 0.84
ECHDC1-216ENST00000479525 GRXCR1A8MXD5 290 aa20.31■□□□□ 0.84
ECHDC1-216ENST00000479525 CHMP4BP1P59074 171 aa20.31■□□□□ 0.84
ECHDC1-216ENST00000479525 DUSP28Q4G0W2 176 aa20.31■□□□□ 0.84
ECHDC1-216ENST00000479525 ASPRV1Q53RT3 343 aa20.31■□□□□ 0.84
ECHDC1-216ENST00000479525 C16orf59Q7L2K0 433 aa20.31■□□□□ 0.84
ECHDC1-216ENST00000479525 TTYH1Q9H313 450 aaPredicted RBP20.31■□□□□ 0.84
ECHDC1-216ENST00000479525 TLR3O15455 904 aaKnown RBP20.3■□□□□ 0.84
ECHDC1-216ENST00000479525 B4GALT4O60513 344 aa20.3■□□□□ 0.84
ECHDC1-216ENST00000479525 CD4P01730 458 aa20.3■□□□□ 0.84
ECHDC1-216ENST00000479525 CCL23P55773 120 aa20.3■□□□□ 0.84
ECHDC1-216ENST00000479525 NKX3-2P78367 333 aa20.3■□□□□ 0.84
ECHDC1-216ENST00000479525 SLC35G1Q2M3R5 365 aa20.3■□□□□ 0.84
ECHDC1-216ENST00000479525 CCDC178Q5BJE1 867 aa20.3■□□□□ 0.84
ECHDC1-216ENST00000479525 MFSD5Q6N075 450 aa20.3■□□□□ 0.84
ECHDC1-216ENST00000479525 PIBF1Q8WXW3 757 aa20.3■□□□□ 0.84
ECHDC1-216ENST00000479525 CNNM2Q9H8M5 875 aa20.3■□□□□ 0.84
ECHDC1-216ENST00000479525 TRIP12Q14669 1992 aaPredicted RBP20.29■□□□□ 0.84
ECHDC1-216ENST00000479525 RAD50Q92878 1312 aa20.29■□□□□ 0.84
ECHDC1-216ENST00000479525 SORBS3O60504 671 aa20.29■□□□□ 0.84
ECHDC1-216ENST00000479525 PPP1R11O60927 126 aaPredicted RBP20.29■□□□□ 0.84
ECHDC1-216ENST00000479525 COL9A3Q14050 684 aaPredicted RBP20.29■□□□□ 0.84
ECHDC1-216ENST00000479525 SEPT14Q6ZU15 432 aa20.29■□□□□ 0.84
ECHDC1-216ENST00000479525 FBXO11Q86XK2 927 aa20.29■□□□□ 0.84
ECHDC1-216ENST00000479525 HOMER1Q86YM7 354 aa20.29■□□□□ 0.84
ECHDC1-216ENST00000479525 SYTL5Q8TDW5 730 aaPredicted RBP20.29■□□□□ 0.84
ECHDC1-216ENST00000479525 ZFP91Q96JP5 570 aaPredicted RBP20.29■□□□□ 0.84
ECHDC1-216ENST00000479525 MAD2L2Q9UI95 211 aa20.29■□□□□ 0.84
ECHDC1-216ENST00000479525 STXBP5LQ9Y2K9 1186 aa20.29■□□□□ 0.84
ECHDC1-216ENST00000479525 UNC80Q8N2C7 3258 aa20.29■□□□□ 0.84
ECHDC1-216ENST00000479525 SCN10AQ9Y5Y9 1956 aa20.29■□□□□ 0.84
ECHDC1-216ENST00000479525 ABCB11O95342 1321 aa20.28■□□□□ 0.84
ECHDC1-216ENST00000479525 E7EWF7 191 aa20.28■□□□□ 0.84
ECHDC1-216ENST00000479525 CFBP00751 764 aa20.28■□□□□ 0.84
ECHDC1-216ENST00000479525 EIF2AK2P19525 551 aaKnown RBP20.28■□□□□ 0.84
ECHDC1-216ENST00000479525 EDNRBP24530 442 aa20.28■□□□□ 0.84
ECHDC1-216ENST00000479525 PPP2R5BQ15173 497 aa20.28■□□□□ 0.84
ECHDC1-216ENST00000479525 TMEM240Q5SV17 173 aa20.28■□□□□ 0.84
ECHDC1-216ENST00000479525 SLC43A3Q8NBI5 491 aa20.28■□□□□ 0.84
ECHDC1-216ENST00000479525 MYLIPQ8WY64 445 aa20.28■□□□□ 0.84
ECHDC1-216ENST00000479525 SCLYQ96I15 445 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms