RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 TSPY2A6NKD2 308 aa13.05□□□□□ -0.32
HDLBP-237ENST00000479169 FOXP2O15409 715 aa13.05□□□□□ -0.32
HDLBP-237ENST00000479169 PLA2G6O60733 806 aa13.05□□□□□ -0.32
HDLBP-237ENST00000479169 SLC3A2P08195 630 aaKnown RBP13.05□□□□□ -0.32
HDLBP-237ENST00000479169 CYP2C9P11712 490 aa13.05□□□□□ -0.32
HDLBP-237ENST00000479169 TTLL4Q14679 1199 aa13.05□□□□□ -0.32
HDLBP-237ENST00000479169 CCDC96Q2M329 555 aa13.05□□□□□ -0.32
HDLBP-237ENST00000479169 ZMYM1Q5SVZ6 1142 aa13.05□□□□□ -0.32
HDLBP-237ENST00000479169 RCSD1Q6JBY9 416 aa13.05□□□□□ -0.32
HDLBP-237ENST00000479169 OTUD7AQ8TE49 926 aaPredicted RBP13.05□□□□□ -0.32
HDLBP-237ENST00000479169 FSD1Q9BTV5 496 aa13.05□□□□□ -0.32
HDLBP-237ENST00000479169 DCTPP1Q9H773 170 aa13.05□□□□□ -0.32
HDLBP-237ENST00000479169 VTA1Q9NP79 307 aa13.05□□□□□ -0.32
HDLBP-237ENST00000479169 RFXAPO00287 272 aa13.04□□□□□ -0.32
HDLBP-237ENST00000479169 NFIBO00712 420 aa13.04□□□□□ -0.32
HDLBP-237ENST00000479169 ATP2A2P16615 1042 aaKnown RBP13.04□□□□□ -0.32
HDLBP-237ENST00000479169 SLC16A2P36021 539 aa13.04□□□□□ -0.32
HDLBP-237ENST00000479169 TFF2Q03403 129 aa13.04□□□□□ -0.32
HDLBP-237ENST00000479169 BAATQ14032 418 aaPredicted RBP13.04□□□□□ -0.32
HDLBP-237ENST00000479169 TTBK2Q6IQ55 1244 aa13.04□□□□□ -0.32
HDLBP-237ENST00000479169 DEFB128Q7Z7B8 93 aa13.04□□□□□ -0.32
HDLBP-237ENST00000479169 RPUSD2Q8IZ73 545 aaKnown RBP13.04□□□□□ -0.32
HDLBP-237ENST00000479169 IL27Q8NEV9 243 aa13.04□□□□□ -0.32
HDLBP-237ENST00000479169 PI4K2BQ8TCG2 481 aa13.04□□□□□ -0.32
HDLBP-237ENST00000479169 MORC4Q8TE76 937 aa13.04□□□□□ -0.32
HDLBP-237ENST00000479169 Q9Y3F1 56 aa13.04□□□□□ -0.32
HDLBP-237ENST00000479169 PCDHA11Q9Y5I1 949 aa13.04□□□□□ -0.32
HDLBP-237ENST00000479169 TNKSO95271 1327 aa13.04□□□□□ -0.32
HDLBP-237ENST00000479169 RANBP6O60518 1105 aaKnown RBP13.03□□□□□ -0.32
HDLBP-237ENST00000479169 ICAM1P05362 532 aa13.03□□□□□ -0.32
HDLBP-237ENST00000479169 MYL3P08590 195 aa13.03□□□□□ -0.32
HDLBP-237ENST00000479169 ALDH5A1P51649 535 aaPredicted RBP13.03□□□□□ -0.32
HDLBP-237ENST00000479169 PURAQ00577 322 aaKnown RBP13.03□□□□□ -0.32
HDLBP-237ENST00000479169 LRRFIP1Q32MZ4 808 aaKnown RBP13.03□□□□□ -0.32
HDLBP-237ENST00000479169 DUSP28Q4G0W2 176 aa13.03□□□□□ -0.32
HDLBP-237ENST00000479169 SEZ6LQ9BYH1 1024 aa13.03□□□□□ -0.32
HDLBP-237ENST00000479169 WDR11Q9BZH6 1224 aa13.03□□□□□ -0.32
HDLBP-237ENST00000479169 RANBP17Q9H2T7 1088 aaKnown RBP13.03□□□□□ -0.32
HDLBP-237ENST00000479169 CERS4Q9HA82 394 aa13.03□□□□□ -0.32
HDLBP-237ENST00000479169 COL4A4P53420 1690 aaPredicted RBP13.02□□□□□ -0.32
HDLBP-237ENST00000479169 EPOPA6NHQ4 379 aa13.02□□□□□ -0.33
HDLBP-237ENST00000479169 ARHGEF15O94989 841 aa13.02□□□□□ -0.33
HDLBP-237ENST00000479169 CA3P07451 260 aa13.02□□□□□ -0.33
HDLBP-237ENST00000479169 KCNQ1P51787 676 aa13.02□□□□□ -0.33
HDLBP-237ENST00000479169 SKIV2LQ15477 1246 aaKnown RBP13.02□□□□□ -0.33
HDLBP-237ENST00000479169 FAM47CQ5HY64 1035 aa13.02□□□□□ -0.33
HDLBP-237ENST00000479169 VPS53Q5VIR6 699 aa13.02□□□□□ -0.33
HDLBP-237ENST00000479169 SYDE2Q5VT97 1194 aa13.02□□□□□ -0.33
HDLBP-237ENST00000479169 KRT40Q6A162 431 aa13.02□□□□□ -0.33
HDLBP-237ENST00000479169 SLC30A10Q6XR72 485 aa13.02□□□□□ -0.33
HDLBP-237ENST00000479169 OR6J1Q8NGC5 347 aa13.02□□□□□ -0.33
HDLBP-237ENST00000479169 POLR3EQ9NVU0 708 aa13.02□□□□□ -0.33
HDLBP-237ENST00000479169 FRMPD2Q68DX3 1309 aaPredicted RBP13.02□□□□□ -0.33
HDLBP-237ENST00000479169 TTC41PQ6P2S7 1318 aa13.02□□□□□ -0.33
HDLBP-237ENST00000479169 MYH6P13533 1939 aa13.01□□□□□ -0.33
HDLBP-237ENST00000479169 PTPDC1A2A3K4 754 aa13.01□□□□□ -0.33
HDLBP-237ENST00000479169 ERC2O15083 957 aa13.01□□□□□ -0.33
HDLBP-237ENST00000479169 BMP1P13497 986 aa13.01□□□□□ -0.33
HDLBP-237ENST00000479169 NBPF20Q3BBV1 942 aa13.01□□□□□ -0.33
HDLBP-237ENST00000479169 TMEM67Q5HYA8 995 aa13.01□□□□□ -0.33
HDLBP-237ENST00000479169 PPP4R3BQ5MIZ7 849 aa13.01□□□□□ -0.33
HDLBP-237ENST00000479169 DIEXFQ68CQ4 756 aaKnown RBP13.01□□□□□ -0.33
HDLBP-237ENST00000479169 DCAF4Q8WV16 495 aa13.01□□□□□ -0.33
HDLBP-237ENST00000479169 TSPYL2Q9H2G4 693 aaPredicted RBP13.01□□□□□ -0.33
HDLBP-237ENST00000479169 GPCPD1Q9NPB8 672 aa13.01□□□□□ -0.33
HDLBP-237ENST00000479169 ADD3Q9UEY8 706 aaKnown RBP13.01□□□□□ -0.33
HDLBP-237ENST00000479169 KIAA1217Q5T5P2 1943 aa13□□□□□ -0.33
HDLBP-237ENST00000479169 RBM47A0AV96 593 aaKnown RBP13□□□□□ -0.33
HDLBP-237ENST00000479169 PFKMP08237 780 aa13□□□□□ -0.33
HDLBP-237ENST00000479169 SUPT20HL2P0C7V6 817 aa13□□□□□ -0.33
HDLBP-237ENST00000479169 CALML3P27482 149 aa13□□□□□ -0.33
HDLBP-237ENST00000479169 NOVP48745 357 aa13□□□□□ -0.33
HDLBP-237ENST00000479169 CPT1AP50416 773 aa13□□□□□ -0.33
HDLBP-237ENST00000479169 BTNL9Q6UXG8 535 aa13□□□□□ -0.33
HDLBP-237ENST00000479169 SPRED2Q7Z698 418 aa13□□□□□ -0.33
HDLBP-237ENST00000479169 CLEC4DQ8WXI8 215 aa13□□□□□ -0.33
HDLBP-237ENST00000479169 COPS5Q92905 334 aa13□□□□□ -0.33
HDLBP-237ENST00000479169 MTG1Q9BT17 334 aaPredicted RBP13□□□□□ -0.33
HDLBP-237ENST00000479169 MTCH2Q9Y6C9 303 aa13□□□□□ -0.33
HDLBP-237ENST00000479169 MYH7BA7E2Y1 1941 aa13□□□□□ -0.33
HDLBP-237ENST00000479169 RBAK-RBAKDNI3L0D1 243 aa12.99□□□□□ -0.33
HDLBP-237ENST00000479169 ORC4O43929 436 aa12.99□□□□□ -0.33
HDLBP-237ENST00000479169 RRP12Q5JTH9 1297 aaKnown RBP12.99□□□□□ -0.33
HDLBP-237ENST00000479169 ARNTL2Q8WYA1 636 aa12.99□□□□□ -0.33
HDLBP-237ENST00000479169 TMEM47Q9BQJ4 181 aa12.99□□□□□ -0.33
HDLBP-237ENST00000479169 GPHNQ9NQX3 736 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-237ENST00000479169 TOMM22Q9NS69 142 aa12.99□□□□□ -0.33
HDLBP-237ENST00000479169 ANAPC4Q9UJX5 808 aa12.99□□□□□ -0.33
HDLBP-237ENST00000479169 GTPBP6O43824 516 aaPredicted RBP12.98□□□□□ -0.33
HDLBP-237ENST00000479169 IQCF3P0C7M6 154 aa12.98□□□□□ -0.33
HDLBP-237ENST00000479169 TOP1P11387 765 aaKnown RBP12.98□□□□□ -0.33
HDLBP-237ENST00000479169 MX1P20591 662 aa12.98□□□□□ -0.33
HDLBP-237ENST00000479169 CHMP4BP1P59074 171 aa12.98□□□□□ -0.33
HDLBP-237ENST00000479169 RPS6P62753 249 aaKnown RBP12.98□□□□□ -0.33
HDLBP-237ENST00000479169 TAP1Q03518 808 aa12.98□□□□□ -0.33
HDLBP-237ENST00000479169 PDE4DQ08499 809 aa12.98□□□□□ -0.33
HDLBP-237ENST00000479169 PPP2R5BQ15173 497 aa12.98□□□□□ -0.33
HDLBP-237ENST00000479169 RNF207Q6ZRF8 634 aa12.98□□□□□ -0.33
HDLBP-237ENST00000479169 SLC9A7Q96T83 725 aa12.98□□□□□ -0.33
HDLBP-237ENST00000479169 FTOQ9C0B1 505 aaKnown RBP eCLIP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms