RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 ARHGEF1Q92888 912 aaKnown RBP9.4□□□□□ -0.9
CD47-204ENST00000471694 PI4K2BG5E9Z4 385 aa9.4□□□□□ -0.91
CD47-204ENST00000471694 MAP3K13O43283 966 aa9.4□□□□□ -0.91
CD47-204ENST00000471694 C6orf222P0C671 652 aaPredicted RBP9.4□□□□□ -0.91
CD47-204ENST00000471694 DNM1Q05193 864 aaKnown RBP9.4□□□□□ -0.91
CD47-204ENST00000471694 FAM83BQ5T0W9 1011 aa9.4□□□□□ -0.91
CD47-204ENST00000471694 ADAT2Q7Z6V5 191 aaKnown RBP9.4□□□□□ -0.91
CD47-204ENST00000471694 NEK8Q86SG6 692 aa9.4□□□□□ -0.91
CD47-204ENST00000471694 ASIC3Q9UHC3 531 aa9.4□□□□□ -0.91
CD47-204ENST00000471694 NR2E3Q9Y5X4 410 aa9.4□□□□□ -0.91
CD47-204ENST00000471694 CTAGE15A4D2H0 777 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 NOL3O60936 208 aaKnown RBP9.39□□□□□ -0.91
CD47-204ENST00000471694 CTAGE8P0CG41 777 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 PAK1Q13153 545 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 IQCB1Q15051 598 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 LGSNQ5TDP6 509 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 TBC1D9BQ66K14 1250 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 CTAGE6Q86UF2 777 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 CTAGE4Q8IX94 777 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 RPUSD2Q8IZ73 545 aaKnown RBP9.39□□□□□ -0.91
CD47-204ENST00000471694 NXF1Q9UBU9 619 aaKnown RBP9.39□□□□□ -0.91
CD47-204ENST00000471694 COPB2P35606 906 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 SCARF1Q14162 830 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 MTERF4Q7Z6M4 381 aaKnown RBP9.39□□□□□ -0.91
CD47-204ENST00000471694 FOXP4Q8IVH2 680 aaPredicted RBP9.39□□□□□ -0.91
CD47-204ENST00000471694 SPATA33Q96N06 139 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 ATP11BQ9Y2G3 1177 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 SPP2Q13103 211 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 RNF180Q86T96 592 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 FAM227BQ96M60 508 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 C16orf45Q96MC5 204 aaPredicted RBP9.39□□□□□ -0.91
CD47-204ENST00000471694 RAB3IPQ96QF0 476 aaPredicted RBP9.39□□□□□ -0.91
CD47-204ENST00000471694 PCDHB7Q9Y5E2 793 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 ADGRL3Q9HAR2 1447 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 CETPP11597 493 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 MCM4P33991 863 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 PHKA1P46020 1223 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 ENTPD7Q9NQZ7 604 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 FEM1BQ9UK73 627 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 RNF8O76064 485 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 GNA14O95837 355 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 OR6B3Q8NGW1 331 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 ATP6V1E2Q96A05 226 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 LSM14BQ9BX40 385 aaKnown RBP9.39□□□□□ -0.91
CD47-204ENST00000471694 BLZF1Q9H2G9 400 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 SAMD15Q9P1V8 674 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 IGSF1Q8N6C5 1336 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 PRAMEF22A3QJZ6 481 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 ASB14A6NK59 587 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 ALDH1A1P00352 501 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 F13A1P00488 732 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 SYT1P21579 422 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 GBP1P32455 592 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 KRT17Q04695 432 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 PPP2R3AQ06190 1150 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 RWDD4Q6NW29 188 aaKnown RBP9.39□□□□□ -0.91
CD47-204ENST00000471694 COL4A3BPQ9Y5P4 624 aa9.39□□□□□ -0.91
CD47-204ENST00000471694 ERICH4A6NGS2 130 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 MOCS3O95396 460 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 BTBD8Q5XKL5 378 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 DEFB132Q7Z7B7 95 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 PPM1KQ8N3J5 372 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 HEXIM2Q96MH2 286 aaKnown RBP9.38□□□□□ -0.91
CD47-204ENST00000471694 GDAQ9Y2T3 454 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 XRCC5P13010 732 aaKnown RBP9.38□□□□□ -0.91
CD47-204ENST00000471694 SOX5P35711 763 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 AAASQ9NRG9 546 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 UTP11Q9Y3A2 253 aaKnown RBP9.38□□□□□ -0.91
CD47-204ENST00000471694 SYNRGQ9UMZ2 1314 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 ARHGAP4P98171 946 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 DCAF4L1Q3SXM0 396 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 SLC9C1Q4G0N8 1177 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 HAUS6Q7Z4H7 955 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 TEX2Q8IWB9 1127 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 NARFQ9UHQ1 456 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 A0A1B0GVL5 298 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 DCDC2CA8MYV0 355 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 DDAH1O94760 285 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 HSPD1P10809 573 aaKnown RBP9.38□□□□□ -0.91
CD47-204ENST00000471694 ATXN3P54252 364 aaPredicted RBP9.38□□□□□ -0.91
CD47-204ENST00000471694 DCLK2Q8N568 766 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 HDAC11Q96DB2 347 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 KATNAL1Q9BW62 490 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 DNAJC25Q9H1X3 360 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 DACT1Q9NYF0 836 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 ZNRF3Q9ULT6 936 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 USP17L15C9J2P7 530 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 USP17L13C9JLJ4 530 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 USP17L11C9JVI0 530 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 USP17L18D6R9N7 530 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 USP17L22D6RA61 530 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 USP17L17D6RBQ6 530 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 USP17L19D6RCP7 530 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 USP17L20D6RJB6 530 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 ADCY5O95622 1261 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 ATP5DP30049 168 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 GPSM2P81274 684 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 USP17L24Q0WX57 530 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 PSMD6Q15008 389 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 SCARA5Q6ZMJ2 495 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms