RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 KIF3CO14782 793 aa17.23■□□□□ 0.35
COL4A5-203ENST00000470339 GCFC2P16383 781 aaKnown RBP17.23■□□□□ 0.35
COL4A5-203ENST00000470339 OSBPP22059 807 aa17.23■□□□□ 0.35
COL4A5-203ENST00000470339 PTPREP23469 700 aa17.23■□□□□ 0.35
COL4A5-203ENST00000470339 HSD17B4P51659 736 aa17.23■□□□□ 0.35
COL4A5-203ENST00000470339 IRX3P78415 501 aaPredicted RBP17.23■□□□□ 0.35
COL4A5-203ENST00000470339 ATP2C1P98194 919 aaPredicted RBP17.23■□□□□ 0.35
COL4A5-203ENST00000470339 ZNF174Q15697 407 aa17.23■□□□□ 0.35
COL4A5-203ENST00000470339 AXDND1Q5T1B0 1012 aaPredicted RBP17.23■□□□□ 0.35
COL4A5-203ENST00000470339 SPRYD7Q5W111 196 aa17.23■□□□□ 0.35
COL4A5-203ENST00000470339 ARL6IP4Q66PJ3 421 aaKnown RBP17.23■□□□□ 0.35
COL4A5-203ENST00000470339 GPAT2Q6NUI2 795 aa17.23■□□□□ 0.35
COL4A5-203ENST00000470339 POTEDQ86YR6 584 aa17.23■□□□□ 0.35
COL4A5-203ENST00000470339 CPXCR1Q8N123 301 aa17.23■□□□□ 0.35
COL4A5-203ENST00000470339 KRI1Q8N9T8 703 aaKnown RBP17.23■□□□□ 0.35
COL4A5-203ENST00000470339 ZNF579Q8NAF0 562 aaKnown RBP17.23■□□□□ 0.35
COL4A5-203ENST00000470339 SMC1BQ8NDV3 1235 aa17.23■□□□□ 0.35
COL4A5-203ENST00000470339 CLEC4DQ8WXI8 215 aa17.23■□□□□ 0.35
COL4A5-203ENST00000470339 TEX13BQ9BXU2 312 aa17.23■□□□□ 0.35
COL4A5-203ENST00000470339 RAVER2Q9HCJ3 691 aaKnown RBP17.23■□□□□ 0.35
COL4A5-203ENST00000470339 ZNF214Q9UL59 606 aaPredicted RBP17.23■□□□□ 0.35
COL4A5-203ENST00000470339 CMA1P23946 247 aa17.22■□□□□ 0.35
COL4A5-203ENST00000470339 PTGDRQ13258 359 aa17.22■□□□□ 0.35
COL4A5-203ENST00000470339 TMEM132BQ14DG7 1078 aa17.22■□□□□ 0.35
COL4A5-203ENST00000470339 PPP4R3AQ6IN85 833 aa17.22■□□□□ 0.35
COL4A5-203ENST00000470339 MOXD1Q6UVY6 613 aa17.22■□□□□ 0.35
COL4A5-203ENST00000470339 C4orf32Q8N8J7 132 aa17.22■□□□□ 0.35
COL4A5-203ENST00000470339 GTF3C2Q8WUA4 911 aaPredicted RBP17.22■□□□□ 0.35
COL4A5-203ENST00000470339 MS4A4AQ96JQ5 239 aa17.22■□□□□ 0.35
COL4A5-203ENST00000470339 ANO3Q9BYT9 981 aa17.22■□□□□ 0.35
COL4A5-203ENST00000470339 ASCC2Q9H1I8 757 aaPredicted RBP17.22■□□□□ 0.35
COL4A5-203ENST00000470339 EHMT1Q9H9B1 1298 aa17.22■□□□□ 0.35
COL4A5-203ENST00000470339 CYP3A7-CYP3A51PA0A087WV96 503 aa17.21■□□□□ 0.35
COL4A5-203ENST00000470339 WNT7AO00755 349 aa17.21■□□□□ 0.35
COL4A5-203ENST00000470339 CFBP00751 764 aa17.21■□□□□ 0.35
COL4A5-203ENST00000470339 ALAS1P13196 640 aa17.21■□□□□ 0.35
COL4A5-203ENST00000470339 CYP3A7P24462 503 aa17.21■□□□□ 0.35
COL4A5-203ENST00000470339 MARCKSP29966 332 aaPredicted RBP17.21■□□□□ 0.35
COL4A5-203ENST00000470339 MCM7P33993 719 aa17.21■□□□□ 0.35
COL4A5-203ENST00000470339 SREBF1P36956 1147 aa17.21■□□□□ 0.35
COL4A5-203ENST00000470339 PRPHP41219 470 aa17.21■□□□□ 0.35
COL4A5-203ENST00000470339 HUNKP57058 714 aa17.21■□□□□ 0.35
COL4A5-203ENST00000470339 CRYGNQ8WXF5 182 aa17.21■□□□□ 0.35
COL4A5-203ENST00000470339 SYAP1Q96A49 352 aaPredicted RBP17.21■□□□□ 0.35
COL4A5-203ENST00000470339 TRERF1Q96PN7 1200 aa17.21■□□□□ 0.35
COL4A5-203ENST00000470339 P2RX7Q99572 595 aaKnown RBP17.21■□□□□ 0.35
COL4A5-203ENST00000470339 FBXO2Q9UK22 296 aaPredicted RBP17.21■□□□□ 0.35
COL4A5-203ENST00000470339 PNMA3Q9UL41 463 aa17.21■□□□□ 0.35
COL4A5-203ENST00000470339 RABGAP1Q9Y3P9 1069 aa17.21■□□□□ 0.35
COL4A5-203ENST00000470339 FAM237AA0A1B0GTK4 181 aa17.2■□□□□ 0.34
COL4A5-203ENST00000470339 CCNT1O60563 726 aaKnown RBP17.2■□□□□ 0.34
COL4A5-203ENST00000470339 CYP3A4P08684 503 aa17.2■□□□□ 0.34
COL4A5-203ENST00000470339 STAT3P40763 770 aa17.2■□□□□ 0.34
COL4A5-203ENST00000470339 HERVK_113P62684 666 aa17.2■□□□□ 0.34
COL4A5-203ENST00000470339 LETM2Q2VYF4 491 aa17.2■□□□□ 0.34
COL4A5-203ENST00000470339 SNRNP48Q6IEG0 339 aaKnown RBP17.2■□□□□ 0.34
COL4A5-203ENST00000470339 ANKRD23Q86SG2 305 aa17.2■□□□□ 0.34
COL4A5-203ENST00000470339 CCAR1Q8IX12 1150 aaKnown RBP17.2■□□□□ 0.34
COL4A5-203ENST00000470339 MRPS27Q92552 414 aaKnown RBP17.2■□□□□ 0.34
COL4A5-203ENST00000470339 EDIL3O43854 480 aa17.19■□□□□ 0.34
COL4A5-203ENST00000470339 COPB2P35606 906 aa17.19■□□□□ 0.34
COL4A5-203ENST00000470339 C1QTNF8P60827 252 aa17.19■□□□□ 0.34
COL4A5-203ENST00000470339 CCDC73Q6ZRK6 1079 aa17.19■□□□□ 0.34
COL4A5-203ENST00000470339 SAPCD2Q86UD0 394 aa17.19■□□□□ 0.34
COL4A5-203ENST00000470339 CHST13Q8NET6 341 aa17.19■□□□□ 0.34
COL4A5-203ENST00000470339 TBC1D5Q92609 795 aa17.19■□□□□ 0.34
COL4A5-203ENST00000470339 MBOAT7Q96N66 472 aa17.19■□□□□ 0.34
COL4A5-203ENST00000470339 RNF146Q9NTX7 359 aa17.19■□□□□ 0.34
COL4A5-203ENST00000470339 CCL15-CCL14A0A0B4J2E2 113 aa17.18■□□□□ 0.34
COL4A5-203ENST00000470339 TESPA1A2RU30 521 aaPredicted RBP17.18■□□□□ 0.34
COL4A5-203ENST00000470339 NFIBO00712 420 aa17.18■□□□□ 0.34
COL4A5-203ENST00000470339 NEMFO60524 1076 aa17.18■□□□□ 0.34
COL4A5-203ENST00000470339 TOMM70O94826 608 aa17.18■□□□□ 0.34
COL4A5-203ENST00000470339 TAL1P17542 331 aaPredicted RBP17.18■□□□□ 0.34
COL4A5-203ENST00000470339 HOXA13P31271 388 aaPredicted RBP17.18■□□□□ 0.34
COL4A5-203ENST00000470339 CIITAP33076 1130 aa17.18■□□□□ 0.34
COL4A5-203ENST00000470339 ARHGAP4P98171 946 aa17.18■□□□□ 0.34
COL4A5-203ENST00000470339 FAM160A1Q05DH4 1040 aa17.18■□□□□ 0.34
COL4A5-203ENST00000470339 CCL15Q16663 113 aa17.18■□□□□ 0.34
COL4A5-203ENST00000470339 MUM1L1Q5H9M0 696 aa17.18■□□□□ 0.34
COL4A5-203ENST00000470339 RESP18Q5W5W9 173 aa17.18■□□□□ 0.34
COL4A5-203ENST00000470339 RIOX2Q8IUF8 465 aa17.18■□□□□ 0.34
COL4A5-203ENST00000470339 FSIP1Q8NA03 581 aa17.18■□□□□ 0.34
COL4A5-203ENST00000470339 FBXO40Q9UH90 709 aa17.18■□□□□ 0.34
COL4A5-203ENST00000470339 SLC25A27O95847 323 aa17.17■□□□□ 0.34
COL4A5-203ENST00000470339 LIG1P18858 919 aa17.17■□□□□ 0.34
COL4A5-203ENST00000470339 LONP1P36776 959 aaKnown RBP17.17■□□□□ 0.34
COL4A5-203ENST00000470339 RGMBQ6NW40 437 aa17.17■□□□□ 0.34
COL4A5-203ENST00000470339 CAVIN1Q6NZI2 390 aaKnown RBP17.17■□□□□ 0.34
COL4A5-203ENST00000470339 SHC4Q6S5L8 630 aa17.17■□□□□ 0.34
COL4A5-203ENST00000470339 POTEEQ6S8J3 1075 aa17.17■□□□□ 0.34
COL4A5-203ENST00000470339 DTHD1Q6ZMT9 781 aa17.17■□□□□ 0.34
COL4A5-203ENST00000470339 FCHSD1Q86WN1 690 aa17.17■□□□□ 0.34
COL4A5-203ENST00000470339 ENGASEQ8NFI3 743 aa17.17■□□□□ 0.34
COL4A5-203ENST00000470339 BRI3BPQ8WY22 251 aa17.17■□□□□ 0.34
COL4A5-203ENST00000470339 HHIPL1Q96JK4 782 aa17.17■□□□□ 0.34
COL4A5-203ENST00000470339 ACAD9Q9H845 621 aa17.17■□□□□ 0.34
COL4A5-203ENST00000470339 ZCCHC17Q9NP64 241 aaKnown RBP17.17■□□□□ 0.34
COL4A5-203ENST00000470339 DDX19AQ9NUU7 478 aaKnown RBP17.17■□□□□ 0.34
COL4A5-203ENST00000470339 BTBD7Q9P203 1132 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms