RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 ZNF827Q17R98 1081 aa6.56□□□□□ -1.36
U2AF1-207ENST00000468039 SEZ6L2Q6UXD5 910 aa6.56□□□□□ -1.36
U2AF1-207ENST00000468039 ZNF654Q8IZM8 581 aa6.56□□□□□ -1.36
U2AF1-207ENST00000468039 C1GALT1Q9NS00 363 aa6.56□□□□□ -1.36
U2AF1-207ENST00000468039 CCNL1Q9UK58 526 aaPredicted RBP6.56□□□□□ -1.36
U2AF1-207ENST00000468039 ASAP1Q9ULH1 1129 aa6.56□□□□□ -1.36
U2AF1-207ENST00000468039 RGPD3A6NKT7 1758 aaPredicted RBP6.56□□□□□ -1.36
U2AF1-207ENST00000468039 RGPD4Q7Z3J3 1758 aa6.56□□□□□ -1.36
U2AF1-207ENST00000468039 MAP3K5Q99683 1374 aa6.56□□□□□ -1.36
U2AF1-207ENST00000468039 PAPPAQ13219 1627 aa6.55□□□□□ -1.36
U2AF1-207ENST00000468039 GNAT3A8MTJ3 354 aa6.55□□□□□ -1.36
U2AF1-207ENST00000468039 ERVV-2B6SEH9 535 aa6.55□□□□□ -1.36
U2AF1-207ENST00000468039 LRIG2O94898 1065 aa6.55□□□□□ -1.36
U2AF1-207ENST00000468039 FAM87AP0C7U9 286 aa6.55□□□□□ -1.36
U2AF1-207ENST00000468039 PLCG1P19174 1290 aa6.55□□□□□ -1.36
U2AF1-207ENST00000468039 GARTP22102 1010 aa6.55□□□□□ -1.36
U2AF1-207ENST00000468039 NTF4P34130 210 aa6.55□□□□□ -1.36
U2AF1-207ENST00000468039 ADMP35318 185 aa6.55□□□□□ -1.36
U2AF1-207ENST00000468039 HDLBPQ00341 1268 aaKnown RBP6.55□□□□□ -1.36
U2AF1-207ENST00000468039 APOBRQ0VD83 1088 aa6.55□□□□□ -1.36
U2AF1-207ENST00000468039 SLC39A6Q13433 755 aa6.55□□□□□ -1.36
U2AF1-207ENST00000468039 ZNF394Q53GI3 561 aa6.55□□□□□ -1.36
U2AF1-207ENST00000468039 OGFOD3Q6PK18 319 aa6.55□□□□□ -1.36
U2AF1-207ENST00000468039 ARHGAP27Q6ZUM4 889 aa6.55□□□□□ -1.36
U2AF1-207ENST00000468039 MCM10Q7L590 875 aa6.55□□□□□ -1.36
U2AF1-207ENST00000468039 REC114Q7Z4M0 266 aa6.55□□□□□ -1.36
U2AF1-207ENST00000468039 ZDHHC13Q8IUH4 622 aa6.55□□□□□ -1.36
U2AF1-207ENST00000468039 PLEKHF1Q96S99 279 aa6.55□□□□□ -1.36
U2AF1-207ENST00000468039 PDGFDQ9GZP0 370 aaPredicted RBP6.55□□□□□ -1.36
U2AF1-207ENST00000468039 KCNQ5Q9NR82 932 aa6.55□□□□□ -1.36
U2AF1-207ENST00000468039 PIM2Q9P1W9 311 aa6.55□□□□□ -1.36
U2AF1-207ENST00000468039 ADAMTS1Q9UHI8 967 aa6.55□□□□□ -1.36
U2AF1-207ENST00000468039 ADGRE2Q9UHX3 823 aa6.55□□□□□ -1.36
U2AF1-207ENST00000468039 ADAM30Q9UKF2 790 aa6.55□□□□□ -1.36
U2AF1-207ENST00000468039 RRP7AQ9Y3A4 280 aaKnown RBP6.55□□□□□ -1.36
U2AF1-207ENST00000468039 PCDHGB7Q9Y5F8 929 aa6.55□□□□□ -1.36
U2AF1-207ENST00000468039 MRC1P22897 1456 aa6.54□□□□□ -1.36
U2AF1-207ENST00000468039 MAPK8IP3Q9UPT6 1336 aa6.54□□□□□ -1.36
U2AF1-207ENST00000468039 LY75O60449 1722 aa6.54□□□□□ -1.36
U2AF1-207ENST00000468039 FAM170BA6NMN3 283 aa6.54□□□□□ -1.36
U2AF1-207ENST00000468039 GREM1O60565 184 aa6.54□□□□□ -1.36
U2AF1-207ENST00000468039 MED26O95402 600 aa6.54□□□□□ -1.36
U2AF1-207ENST00000468039 ITPK1Q13572 414 aa6.54□□□□□ -1.36
U2AF1-207ENST00000468039 INTS5Q6P9B9 1019 aaKnown RBP6.54□□□□□ -1.36
U2AF1-207ENST00000468039 SMIM5Q71RC9 77 aa6.54□□□□□ -1.36
U2AF1-207ENST00000468039 ARMCX6Q7L4S7 300 aa6.54□□□□□ -1.36
U2AF1-207ENST00000468039 NT5DC4Q86YG4 428 aa6.54□□□□□ -1.36
U2AF1-207ENST00000468039 TOP6BLQ8N6T0 577 aa6.54□□□□□ -1.36
U2AF1-207ENST00000468039 MFSD2AQ8NA29 543 aa6.54□□□□□ -1.36
U2AF1-207ENST00000468039 LINC00116Q8NCU8 138 aa6.54□□□□□ -1.36
U2AF1-207ENST00000468039 IL17REQ8NFR9 667 aa6.54□□□□□ -1.36
U2AF1-207ENST00000468039 NKD1Q969G9 470 aa6.54□□□□□ -1.36
U2AF1-207ENST00000468039 THUMPD2Q9BTF0 503 aaKnown RBP6.54□□□□□ -1.36
U2AF1-207ENST00000468039 NT5C1AQ9BXI3 368 aa6.54□□□□□ -1.36
U2AF1-207ENST00000468039 LRRC3Q9BY71 257 aa6.54□□□□□ -1.36
U2AF1-207ENST00000468039 FOXQ1Q9C009 403 aa6.54□□□□□ -1.36
U2AF1-207ENST00000468039 SLC52A2Q9HAB3 445 aa6.54□□□□□ -1.36
U2AF1-207ENST00000468039 STK32BQ9NY57 414 aa6.54□□□□□ -1.36
U2AF1-207ENST00000468039 DDX41Q9UJV9 622 aaKnown RBP6.54□□□□□ -1.36
U2AF1-207ENST00000468039 SCN11AQ9UI33 1791 aa6.54□□□□□ -1.36
U2AF1-207ENST00000468039 ADAMTS7Q9UKP4 1686 aa6.53□□□□□ -1.36
U2AF1-207ENST00000468039 CYP26A1O43174 497 aa6.53□□□□□ -1.36
U2AF1-207ENST00000468039 KCNQ3O43525 872 aa6.53□□□□□ -1.36
U2AF1-207ENST00000468039 GRIN3BO60391 1043 aa6.53□□□□□ -1.36
U2AF1-207ENST00000468039 TGFB1P01137 390 aa6.53□□□□□ -1.36
U2AF1-207ENST00000468039 MCM4P33991 863 aa6.53□□□□□ -1.36
U2AF1-207ENST00000468039 YARSP54577 528 aaKnown RBP6.53□□□□□ -1.36
U2AF1-207ENST00000468039 NFE2L2Q16236 605 aa6.53□□□□□ -1.36
U2AF1-207ENST00000468039 SLC15A2Q16348 729 aa6.53□□□□□ -1.36
U2AF1-207ENST00000468039 SEZ6Q53EL9 994 aa6.53□□□□□ -1.36
U2AF1-207ENST00000468039 C9orf131Q5VYM1 1079 aa6.53□□□□□ -1.36
U2AF1-207ENST00000468039 SLC6A19Q695T7 634 aa6.53□□□□□ -1.36
U2AF1-207ENST00000468039 ZNF765Q7L2R6 523 aa6.53□□□□□ -1.36
U2AF1-207ENST00000468039 AMIGO3Q86WK7 504 aa6.53□□□□□ -1.36
U2AF1-207ENST00000468039 FBXO27Q8NI29 283 aa6.53□□□□□ -1.36
U2AF1-207ENST00000468039 GATA6Q92908 595 aa6.53□□□□□ -1.36
U2AF1-207ENST00000468039 SMARCC1Q92922 1105 aaPredicted RBP6.53□□□□□ -1.36
U2AF1-207ENST00000468039 FBRSQ9HAH7 460 aa6.53□□□□□ -1.36
U2AF1-207ENST00000468039 PRDM10Q9NQV6 1147 aa6.53□□□□□ -1.36
U2AF1-207ENST00000468039 UBP1Q9NZI7 540 aa6.53□□□□□ -1.36
U2AF1-207ENST00000468039 KCPQ6ZWJ8 1503 aa6.52□□□□□ -1.37
U2AF1-207ENST00000468039 ZBTB7AO95365 584 aa6.52□□□□□ -1.37
U2AF1-207ENST00000468039 CAP2P40123 477 aa6.52□□□□□ -1.37
U2AF1-207ENST00000468039 ZNF165P49910 485 aa6.52□□□□□ -1.37
U2AF1-207ENST00000468039 RIPK4P57078 832 aa6.52□□□□□ -1.37
U2AF1-207ENST00000468039 TEFQ10587 303 aa6.52□□□□□ -1.37
U2AF1-207ENST00000468039 SLBPQ14493 270 aaKnown RBP eCLIP6.52□□□□□ -1.37
U2AF1-207ENST00000468039 UBE3DQ7Z6J8 389 aa6.52□□□□□ -1.37
U2AF1-207ENST00000468039 METTL16Q86W50 562 aaKnown RBP6.52□□□□□ -1.37
U2AF1-207ENST00000468039 FAM13CQ8NE31 585 aa6.52□□□□□ -1.37
U2AF1-207ENST00000468039 RTF1Q92541 710 aaKnown RBP6.52□□□□□ -1.37
U2AF1-207ENST00000468039 ASIC4Q96FT7 647 aa6.52□□□□□ -1.37
U2AF1-207ENST00000468039 TMEM87BQ96K49 555 aa6.52□□□□□ -1.37
U2AF1-207ENST00000468039 DUSP23Q9BVJ7 150 aa6.52□□□□□ -1.37
U2AF1-207ENST00000468039 CCSER2Q9H7U1 834 aa6.52□□□□□ -1.37
U2AF1-207ENST00000468039 LRRC4CQ9HCJ2 640 aa6.52□□□□□ -1.37
U2AF1-207ENST00000468039 BRMS1Q9HCU9 246 aa6.52□□□□□ -1.37
U2AF1-207ENST00000468039 MIS18AQ9NYP9 233 aa6.52□□□□□ -1.37
U2AF1-207ENST00000468039 GTF2IRD1Q9UHL9 959 aa6.52□□□□□ -1.37
U2AF1-207ENST00000468039 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms