RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 VTA1Q9NP79 307 aa17.32■□□□□ 0.36
ATPAF2-204ENST00000467560 WDR19Q8NEZ3 1342 aa17.31■□□□□ 0.36
ATPAF2-204ENST00000467560 TIMP1P01033 207 aa17.31■□□□□ 0.36
ATPAF2-204ENST00000467560 PSMC6P62333 389 aa17.31■□□□□ 0.36
ATPAF2-204ENST00000467560 PTH1RQ03431 593 aa17.31■□□□□ 0.36
ATPAF2-204ENST00000467560 FPGSQ05932 587 aa17.31■□□□□ 0.36
ATPAF2-204ENST00000467560 IMMTQ16891 758 aaKnown RBP17.31■□□□□ 0.36
ATPAF2-204ENST00000467560 IQSEC1Q6DN90 963 aa17.31■□□□□ 0.36
ATPAF2-204ENST00000467560 RNF207Q6ZRF8 634 aa17.31■□□□□ 0.36
ATPAF2-204ENST00000467560 CYB5R4Q7L1T6 521 aa17.31■□□□□ 0.36
ATPAF2-204ENST00000467560 IQCA1Q86XH1 822 aa17.31■□□□□ 0.36
ATPAF2-204ENST00000467560 SLC43A3Q8NBI5 491 aa17.31■□□□□ 0.36
ATPAF2-204ENST00000467560 KAT14Q9H8E8 782 aa17.31■□□□□ 0.36
ATPAF2-204ENST00000467560 EYSQ5T1H1 3165 aa17.31■□□□□ 0.36
ATPAF2-204ENST00000467560 CD4P01730 458 aa17.3■□□□□ 0.36
ATPAF2-204ENST00000467560 CDC37Q16543 378 aaPredicted RBP17.3■□□□□ 0.36
ATPAF2-204ENST00000467560 GPATCH4Q5T3I0 446 aaKnown RBP17.3■□□□□ 0.36
ATPAF2-204ENST00000467560 FAM109BQ6ICB4 259 aaPredicted RBP17.3■□□□□ 0.36
ATPAF2-204ENST00000467560 ADGRF4Q8IZF3 695 aa17.3■□□□□ 0.36
ATPAF2-204ENST00000467560 WDR11Q9BZH6 1224 aa17.3■□□□□ 0.36
ATPAF2-204ENST00000467560 AP5M1Q9H0R1 490 aa17.3■□□□□ 0.36
ATPAF2-204ENST00000467560 ADD3Q9UEY8 706 aaKnown RBP17.3■□□□□ 0.36
ATPAF2-204ENST00000467560 CTNNA3Q9UI47 895 aa17.3■□□□□ 0.36
ATPAF2-204ENST00000467560 STXBP5LQ9Y2K9 1186 aa17.3■□□□□ 0.36
ATPAF2-204ENST00000467560 UMODL1Q5DID0 1318 aa17.29■□□□□ 0.36
ATPAF2-204ENST00000467560 RBM47A0AV96 593 aaKnown RBP17.29■□□□□ 0.36
ATPAF2-204ENST00000467560 EDNRBP24530 442 aa17.29■□□□□ 0.36
ATPAF2-204ENST00000467560 CHMLP26374 656 aa17.29■□□□□ 0.36
ATPAF2-204ENST00000467560 SEC23AQ15436 765 aa17.29■□□□□ 0.36
ATPAF2-204ENST00000467560 DUSP28Q4G0W2 176 aa17.29■□□□□ 0.36
ATPAF2-204ENST00000467560 STAG2Q8N3U4 1231 aa17.29■□□□□ 0.36
ATPAF2-204ENST00000467560 RNPC3Q96LT9 517 aaKnown RBP17.29■□□□□ 0.36
ATPAF2-204ENST00000467560 PPP1R12CQ9BZL4 782 aa17.29■□□□□ 0.36
ATPAF2-204ENST00000467560 TRPV6Q9H1D0 765 aa17.29■□□□□ 0.36
ATPAF2-204ENST00000467560 TTYH1Q9H313 450 aaPredicted RBP17.29■□□□□ 0.36
ATPAF2-204ENST00000467560 COL20A1Q9P218 1284 aa17.29■□□□□ 0.36
ATPAF2-204ENST00000467560 CSF2RAP15509 400 aa17.28■□□□□ 0.36
ATPAF2-204ENST00000467560 CYP2C18P33260 490 aa17.28■□□□□ 0.36
ATPAF2-204ENST00000467560 ITGA7Q13683 1181 aa17.28■□□□□ 0.36
ATPAF2-204ENST00000467560 SLC35G1Q2M3R5 365 aa17.28■□□□□ 0.36
ATPAF2-204ENST00000467560 QRICH1Q2TAL8 776 aa17.28■□□□□ 0.36
ATPAF2-204ENST00000467560 MFSD5Q6N075 450 aa17.28■□□□□ 0.36
ATPAF2-204ENST00000467560 SLC17A8Q8NDX2 589 aa17.28■□□□□ 0.36
ATPAF2-204ENST00000467560 PPP1R13LQ8WUF5 828 aa17.28■□□□□ 0.36
ATPAF2-204ENST00000467560 COPS5Q92905 334 aa17.28■□□□□ 0.36
ATPAF2-204ENST00000467560 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.28■□□□□ 0.36
ATPAF2-204ENST00000467560 KRT23Q9C075 422 aa17.28■□□□□ 0.36
ATPAF2-204ENST00000467560 JMJD4Q9H9V9 463 aa17.28■□□□□ 0.36
ATPAF2-204ENST00000467560 SENP2Q9HC62 589 aa17.28■□□□□ 0.36
ATPAF2-204ENST00000467560 VAT1LQ9HCJ6 419 aa17.28■□□□□ 0.36
ATPAF2-204ENST00000467560 Q9Y3F1 56 aa17.28■□□□□ 0.36
ATPAF2-204ENST00000467560 CHD9Q3L8U1 2897 aa17.28■□□□□ 0.36
ATPAF2-204ENST00000467560 MROH7Q68CQ1 1323 aa17.27■□□□□ 0.36
ATPAF2-204ENST00000467560 ARIH2O95376 493 aa17.27■□□□□ 0.36
ATPAF2-204ENST00000467560 CYP21A2P08686 494 aa17.27■□□□□ 0.36
ATPAF2-204ENST00000467560 ACRP10323 421 aa17.27■□□□□ 0.36
ATPAF2-204ENST00000467560 NT5C2P49902 561 aa17.27■□□□□ 0.36
ATPAF2-204ENST00000467560 SMAD3P84022 425 aaKnown RBP17.27■□□□□ 0.36
ATPAF2-204ENST00000467560 ASPRV1Q53RT3 343 aa17.27■□□□□ 0.36
ATPAF2-204ENST00000467560 CCDC178Q5BJE1 867 aa17.27■□□□□ 0.36
ATPAF2-204ENST00000467560 SEMA6BQ9H3T3 888 aa17.27■□□□□ 0.36
ATPAF2-204ENST00000467560 LOC102724159A0A0B4J2E5 919 aa17.26■□□□□ 0.35
ATPAF2-204ENST00000467560 OPLAHO14841 1288 aa17.26■□□□□ 0.35
ATPAF2-204ENST00000467560 B4GALT4O60513 344 aa17.26■□□□□ 0.35
ATPAF2-204ENST00000467560 PPP1R11O60927 126 aaPredicted RBP17.26■□□□□ 0.35
ATPAF2-204ENST00000467560 CABYRO75952 493 aa17.26■□□□□ 0.35
ATPAF2-204ENST00000467560 PARP1P09874 1014 aaKnown RBP17.26■□□□□ 0.35
ATPAF2-204ENST00000467560 PDE4DQ08499 809 aa17.26■□□□□ 0.35
ATPAF2-204ENST00000467560 PWP2Q15269 919 aaKnown RBP17.26■□□□□ 0.35
ATPAF2-204ENST00000467560 TMEM240Q5SV17 173 aa17.26■□□□□ 0.35
ATPAF2-204ENST00000467560 ZNF697Q5TEC3 545 aa17.26■□□□□ 0.35
ATPAF2-204ENST00000467560 STOX1Q6ZVD7 989 aa17.26■□□□□ 0.35
ATPAF2-204ENST00000467560 RGS22Q8NE09 1264 aa17.26■□□□□ 0.35
ATPAF2-204ENST00000467560 SYTL5Q8TDW5 730 aaPredicted RBP17.26■□□□□ 0.35
ATPAF2-204ENST00000467560 TAAR1Q96RJ0 339 aa17.26■□□□□ 0.35
ATPAF2-204ENST00000467560 UBAC1Q9BSL1 405 aa17.26■□□□□ 0.35
ATPAF2-204ENST00000467560 CNNM2Q9H8M5 875 aa17.26■□□□□ 0.35
ATPAF2-204ENST00000467560 PNMA2Q9UL42 364 aa17.26■□□□□ 0.35
ATPAF2-204ENST00000467560 RAD50Q92878 1312 aa17.25■□□□□ 0.35
ATPAF2-204ENST00000467560 IFIT1BQ5T764 474 aaKnown RBP17.25■□□□□ 0.35
ATPAF2-204ENST00000467560 DNERQ8NFT8 737 aa17.25■□□□□ 0.35
ATPAF2-204ENST00000467560 VWCEQ96DN2 955 aa17.25■□□□□ 0.35
ATPAF2-204ENST00000467560 CDX2Q99626 313 aaPredicted RBP17.25■□□□□ 0.35
ATPAF2-204ENST00000467560 MAD2L2Q9UI95 211 aa17.25■□□□□ 0.35
ATPAF2-204ENST00000467560 VCANP13611 3396 aa17.25■□□□□ 0.35
ATPAF2-204ENST00000467560 PRUNE2Q8WUY3 3088 aa17.25■□□□□ 0.35
ATPAF2-204ENST00000467560 ABCB11O95342 1321 aa17.24■□□□□ 0.35
ATPAF2-204ENST00000467560 TLR3O15455 904 aaKnown RBP17.24■□□□□ 0.35
ATPAF2-204ENST00000467560 SGSM2O43147 1006 aa17.24■□□□□ 0.35
ATPAF2-204ENST00000467560 PURAQ00577 322 aaKnown RBP17.24■□□□□ 0.35
ATPAF2-204ENST00000467560 COL9A3Q14050 684 aaPredicted RBP17.24■□□□□ 0.35
ATPAF2-204ENST00000467560 RASIP1Q5U651 963 aa17.24■□□□□ 0.35
ATPAF2-204ENST00000467560 ZNF365Q70YC5 407 aa17.24■□□□□ 0.35
ATPAF2-204ENST00000467560 CHST3Q7LGC8 479 aa17.24■□□□□ 0.35
ATPAF2-204ENST00000467560 OR6J1Q8NGC5 347 aa17.24■□□□□ 0.35
ATPAF2-204ENST00000467560 NOC4LQ9BVI4 516 aaKnown RBP17.24■□□□□ 0.35
ATPAF2-204ENST00000467560 WNT8AQ9H1J5 351 aa17.24■□□□□ 0.35
ATPAF2-204ENST00000467560 TRMT13Q9NUP7 481 aaKnown RBP17.24■□□□□ 0.35
ATPAF2-204ENST00000467560 PALM3A6NDB9 673 aaPredicted RBP17.23■□□□□ 0.35
ATPAF2-204ENST00000467560 GRXCR1A8MXD5 290 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms