RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 TPCN1Q9ULQ1 816 aa12.79□□□□□ -0.36
MSH5-212ENST00000467319 PCDHA1Q9Y5I3 950 aa12.79□□□□□ -0.36
MSH5-212ENST00000467319 RPTORQ8N122 1335 aa12.79□□□□□ -0.36
MSH5-212ENST00000467319 LOC102724159A0A0B4J2E5 919 aa12.78□□□□□ -0.36
MSH5-212ENST00000467319 POTEFA5A3E0 1075 aa12.78□□□□□ -0.36
MSH5-212ENST00000467319 GJB1P08034 283 aa12.78□□□□□ -0.36
MSH5-212ENST00000467319 IFNAR1P17181 557 aa12.78□□□□□ -0.36
MSH5-212ENST00000467319 EDNRBP24530 442 aa12.78□□□□□ -0.36
MSH5-212ENST00000467319 PWP2Q15269 919 aaKnown RBP12.78□□□□□ -0.36
MSH5-212ENST00000467319 ANKRD1Q15327 319 aa12.78□□□□□ -0.36
MSH5-212ENST00000467319 SYTL5Q8TDW5 730 aaPredicted RBP12.78□□□□□ -0.36
MSH5-212ENST00000467319 PURBQ96QR8 312 aaKnown RBP12.78□□□□□ -0.36
MSH5-212ENST00000467319 NCOA5Q9HCD5 579 aaKnown RBP12.78□□□□□ -0.36
MSH5-212ENST00000467319 FRMPD4Q14CM0 1322 aa12.78□□□□□ -0.36
MSH5-212ENST00000467319 hCG_1642624A0A1W2PR95 340 aa12.77□□□□□ -0.37
MSH5-212ENST00000467319 PTPDC1A2A3K4 754 aa12.77□□□□□ -0.37
MSH5-212ENST00000467319 CCDC85CA6NKD9 419 aa12.77□□□□□ -0.37
MSH5-212ENST00000467319 hCG_1984214I3L0E3 225 aa12.77□□□□□ -0.37
MSH5-212ENST00000467319 PFKFB2O60825 505 aa12.77□□□□□ -0.37
MSH5-212ENST00000467319 SNAI1O95863 264 aaPredicted RBP12.77□□□□□ -0.37
MSH5-212ENST00000467319 CCND3P30281 292 aaPredicted RBP12.77□□□□□ -0.37
MSH5-212ENST00000467319 ALDH5A1P51649 535 aaPredicted RBP12.77□□□□□ -0.37
MSH5-212ENST00000467319 NEK4P51957 841 aa12.77□□□□□ -0.37
MSH5-212ENST00000467319 WWC2Q6AWC2 1192 aa12.77□□□□□ -0.37
MSH5-212ENST00000467319 TYW1BQ6NUM6 668 aa12.77□□□□□ -0.37
MSH5-212ENST00000467319 PPP1R18Q6NYC8 613 aa12.77□□□□□ -0.37
MSH5-212ENST00000467319 ARMCX2Q7L311 632 aa12.77□□□□□ -0.37
MSH5-212ENST00000467319 MCF2L2Q86YR7 1114 aa12.77□□□□□ -0.37
MSH5-212ENST00000467319 CCDC82Q8N4S0 544 aa12.77□□□□□ -0.37
MSH5-212ENST00000467319 SAMD3Q8N6K7 520 aa12.77□□□□□ -0.37
MSH5-212ENST00000467319 ZNF713Q8N859 430 aaPredicted RBP12.77□□□□□ -0.37
MSH5-212ENST00000467319 DNERQ8NFT8 737 aa12.77□□□□□ -0.37
MSH5-212ENST00000467319 PIBF1Q8WXW3 757 aa12.77□□□□□ -0.37
MSH5-212ENST00000467319 TBC1D5Q92609 795 aa12.77□□□□□ -0.37
MSH5-212ENST00000467319 LARP6Q9BRS8 491 aaKnown RBP12.77□□□□□ -0.37
MSH5-212ENST00000467319 RNF26Q9BY78 433 aaPredicted RBP12.77□□□□□ -0.37
MSH5-212ENST00000467319 CRISPLD2Q9H0B8 497 aa12.77□□□□□ -0.37
MSH5-212ENST00000467319 UPF2Q9HAU5 1272 aaKnown RBP12.77□□□□□ -0.37
MSH5-212ENST00000467319 HMX1Q9NP08 348 aaPredicted RBP12.77□□□□□ -0.37
MSH5-212ENST00000467319 MAP3K20Q9NYL2 800 aaKnown RBP12.77□□□□□ -0.37
MSH5-212ENST00000467319 NAP1L2Q9ULW6 460 aaPredicted RBP12.77□□□□□ -0.37
MSH5-212ENST00000467319 PIK3CDO00329 1044 aa12.76□□□□□ -0.37
MSH5-212ENST00000467319 LARGE1O95461 756 aa12.76□□□□□ -0.37
MSH5-212ENST00000467319 MYCP01106 439 aaPredicted RBP12.76□□□□□ -0.37
MSH5-212ENST00000467319 ZNF865P0CJ78 1059 aaPredicted RBP12.76□□□□□ -0.37
MSH5-212ENST00000467319 CALML3P27482 149 aa12.76□□□□□ -0.37
MSH5-212ENST00000467319 GJA8P48165 433 aa12.76□□□□□ -0.37
MSH5-212ENST00000467319 SOX10P56693 466 aa12.76□□□□□ -0.37
MSH5-212ENST00000467319 SCRN1Q12765 414 aa12.76□□□□□ -0.37
MSH5-212ENST00000467319 RABEP1Q15276 862 aa12.76□□□□□ -0.37
MSH5-212ENST00000467319 TEX2Q8IWB9 1127 aa12.76□□□□□ -0.37
MSH5-212ENST00000467319 GPKOWQ92917 476 aaPredicted RBP eCLIP12.76□□□□□ -0.37
MSH5-212ENST00000467319 RNF208Q9H0X6 261 aa12.76□□□□□ -0.37
MSH5-212ENST00000467319 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.76□□□□□ -0.37
MSH5-212ENST00000467319 RBM27Q9P2N5 1060 aaKnown RBP12.76□□□□□ -0.37
MSH5-212ENST00000467319 ADD3Q9UEY8 706 aaKnown RBP12.76□□□□□ -0.37
MSH5-212ENST00000467319 DDX49Q9Y6V7 483 aaKnown RBP12.76□□□□□ -0.37
MSH5-212ENST00000467319 ASB14A6NK59 587 aa12.75□□□□□ -0.37
MSH5-212ENST00000467319 STXBP3O00186 592 aa12.75□□□□□ -0.37
MSH5-212ENST00000467319 SEPT4O43236 478 aa12.75□□□□□ -0.37
MSH5-212ENST00000467319 PRPF3O43395 683 aaKnown RBP12.75□□□□□ -0.37
MSH5-212ENST00000467319 SCG2P13521 617 aa12.75□□□□□ -0.37
MSH5-212ENST00000467319 CCT2P78371 535 aaKnown RBP12.75□□□□□ -0.37
MSH5-212ENST00000467319 ST3GAL1Q11201 340 aa12.75□□□□□ -0.37
MSH5-212ENST00000467319 PKN1Q16512 942 aa12.75□□□□□ -0.37
MSH5-212ENST00000467319 ME3Q16798 604 aa12.75□□□□□ -0.37
MSH5-212ENST00000467319 PFKFB3Q16875 520 aaPredicted RBP12.75□□□□□ -0.37
MSH5-212ENST00000467319 LHX8Q68G74 356 aa12.75□□□□□ -0.37
MSH5-212ENST00000467319 HEATR3Q7Z4Q2 680 aa12.75□□□□□ -0.37
MSH5-212ENST00000467319 U2AF1L4Q8WU68 220 aaKnown RBP12.75□□□□□ -0.37
MSH5-212ENST00000467319 PHKBQ93100 1093 aa12.75□□□□□ -0.37
MSH5-212ENST00000467319 GTF3C6Q969F1 213 aa12.75□□□□□ -0.37
MSH5-212ENST00000467319 DEFB118Q96PH6 123 aa12.75□□□□□ -0.37
MSH5-212ENST00000467319 BARHL2Q9NY43 387 aa12.75□□□□□ -0.37
MSH5-212ENST00000467319 DDX20Q9UHI6 824 aaKnown RBP12.75□□□□□ -0.37
MSH5-212ENST00000467319 CNPY2Q9Y2B0 182 aa12.75□□□□□ -0.37
MSH5-212ENST00000467319 V9GY48 417 aaPredicted RBP12.75□□□□□ -0.37
MSH5-212ENST00000467319 STK36Q9NRP7 1315 aa12.74□□□□□ -0.37
MSH5-212ENST00000467319 GCOM1H8Y6P7 765 aaPredicted RBP12.74□□□□□ -0.37
MSH5-212ENST00000467319 MEIS2O14770 477 aa12.74□□□□□ -0.37
MSH5-212ENST00000467319 MSCO60682 206 aa12.74□□□□□ -0.37
MSH5-212ENST00000467319 CTDNEP1O95476 244 aa12.74□□□□□ -0.37
MSH5-212ENST00000467319 CFBP00751 764 aa12.74□□□□□ -0.37
MSH5-212ENST00000467319 POLR2MP0CAP2 368 aa12.74□□□□□ -0.37
MSH5-212ENST00000467319 HOXA13P31271 388 aaPredicted RBP12.74□□□□□ -0.37
MSH5-212ENST00000467319 STK3Q13188 491 aa12.74□□□□□ -0.37
MSH5-212ENST00000467319 UBE2Q1Q7Z7E8 422 aa12.74□□□□□ -0.37
MSH5-212ENST00000467319 IL27Q8NEV9 243 aa12.74□□□□□ -0.37
MSH5-212ENST00000467319 TMEM106CQ9BVX2 250 aa12.74□□□□□ -0.37
MSH5-212ENST00000467319 ABHD16BQ9H3Z7 469 aa12.74□□□□□ -0.37
MSH5-212ENST00000467319 PXMP2Q9NR77 195 aa12.74□□□□□ -0.37
MSH5-212ENST00000467319 OGDHLQ9ULD0 1010 aa12.74□□□□□ -0.37
MSH5-212ENST00000467319 TNRC18O15417 2968 aaPredicted RBP12.74□□□□□ -0.37
MSH5-212ENST00000467319 ESYT2A0FGR8 921 aa12.73□□□□□ -0.37
MSH5-212ENST00000467319 ADCY6O43306 1168 aa12.73□□□□□ -0.37
MSH5-212ENST00000467319 SGPL1O95470 568 aa12.73□□□□□ -0.37
MSH5-212ENST00000467319 CAPN2P17655 700 aa12.73□□□□□ -0.37
MSH5-212ENST00000467319 MNX1P50219 401 aaPredicted RBP12.73□□□□□ -0.37
MSH5-212ENST00000467319 ACVR2BQ13705 512 aa12.73□□□□□ -0.37
MSH5-212ENST00000467319 PRAMEF19Q5SWL8 479 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms