RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 CAPN2P17655 700 aa7.08□□□□□ -1.28
PTCD3-207ENST00000467273 EIF1AXP47813 144 aaKnown RBP7.08□□□□□ -1.28
PTCD3-207ENST00000467273 SP3Q02447 781 aa7.08□□□□□ -1.28
PTCD3-207ENST00000467273 PTPN12Q05209 780 aaKnown RBP7.08□□□□□ -1.28
PTCD3-207ENST00000467273 SF3B3Q15393 1217 aaKnown RBP7.08□□□□□ -1.28
PTCD3-207ENST00000467273 MAP3K11Q16584 847 aa7.08□□□□□ -1.28
PTCD3-207ENST00000467273 SLC9C1Q4G0N8 1177 aa7.08□□□□□ -1.28
PTCD3-207ENST00000467273 FAM26DQ5JW98 314 aa7.08□□□□□ -1.28
PTCD3-207ENST00000467273 LCE4AQ5TA78 99 aa7.08□□□□□ -1.28
PTCD3-207ENST00000467273 NCAPG2Q86XI2 1143 aa7.08□□□□□ -1.28
PTCD3-207ENST00000467273 APOBEC3FQ8IUX4 373 aaKnown RBP7.08□□□□□ -1.28
PTCD3-207ENST00000467273 TBC1D16Q8TBP0 767 aa7.08□□□□□ -1.28
PTCD3-207ENST00000467273 SLC7A3Q8WY07 619 aa7.08□□□□□ -1.28
PTCD3-207ENST00000467273 CFAP53Q96M91 514 aa7.08□□□□□ -1.28
PTCD3-207ENST00000467273 ASB16Q96NS5 453 aa7.08□□□□□ -1.28
PTCD3-207ENST00000467273 PBX4Q9BYU1 374 aa7.08□□□□□ -1.28
PTCD3-207ENST00000467273 KCNQ5Q9NR82 932 aa7.08□□□□□ -1.28
PTCD3-207ENST00000467273 TRMT112Q9UI30 125 aaKnown RBP7.08□□□□□ -1.28
PTCD3-207ENST00000467273 ZNF646O15015 1829 aaPredicted RBP7.08□□□□□ -1.28
PTCD3-207ENST00000467273 MYO3BQ8WXR4 1341 aa7.07□□□□□ -1.28
PTCD3-207ENST00000467273 E9PSI1 815 aa7.07□□□□□ -1.28
PTCD3-207ENST00000467273 H3BRJ5 948 aa7.07□□□□□ -1.28
PTCD3-207ENST00000467273 ZBTB39O15060 712 aa7.07□□□□□ -1.28
PTCD3-207ENST00000467273 HSPA5P11021 654 aaKnown RBP7.07□□□□□ -1.28
PTCD3-207ENST00000467273 JUNBP17275 347 aaPredicted RBP7.07□□□□□ -1.28
PTCD3-207ENST00000467273 ITGB5P18084 799 aa7.07□□□□□ -1.28
PTCD3-207ENST00000467273 GPSM2P81274 684 aa7.07□□□□□ -1.28
PTCD3-207ENST00000467273 SLC4A8Q2Y0W8 1093 aa7.07□□□□□ -1.28
PTCD3-207ENST00000467273 MOB2Q70IA6 237 aa7.07□□□□□ -1.28
PTCD3-207ENST00000467273 LRP10Q7Z4F1 713 aa7.07□□□□□ -1.28
PTCD3-207ENST00000467273 FLCNQ8NFG4 579 aa7.07□□□□□ -1.28
PTCD3-207ENST00000467273 PIK3R5Q8WYR1 880 aa7.07□□□□□ -1.28
PTCD3-207ENST00000467273 HTATIP2Q9BUP3 242 aa7.07□□□□□ -1.28
PTCD3-207ENST00000467273 CLSPNQ9HAW4 1339 aa7.06□□□□□ -1.28
PTCD3-207ENST00000467273 FZD6O60353 706 aa7.06□□□□□ -1.28
PTCD3-207ENST00000467273 PRNPP04156 253 aa7.06□□□□□ -1.28
PTCD3-207ENST00000467273 CYP2E1P05181 493 aaPredicted RBP7.06□□□□□ -1.28
PTCD3-207ENST00000467273 PRMT2P55345 433 aa7.06□□□□□ -1.28
PTCD3-207ENST00000467273 RPS8P62241 208 aaKnown RBP7.06□□□□□ -1.28
PTCD3-207ENST00000467273 CRHR2Q13324 411 aa7.06□□□□□ -1.28
PTCD3-207ENST00000467273 AAMPQ13685 434 aa7.06□□□□□ -1.28
PTCD3-207ENST00000467273 NFXL1Q6ZNB6 911 aa7.06□□□□□ -1.28
PTCD3-207ENST00000467273 ZSCAN29Q8IWY8 852 aaPredicted RBP7.06□□□□□ -1.28
PTCD3-207ENST00000467273 CD99L2Q8TCZ2 262 aa7.06□□□□□ -1.28
PTCD3-207ENST00000467273 CELF1Q92879 486 aaKnown RBP7.06□□□□□ -1.28
PTCD3-207ENST00000467273 POP1Q99575 1024 aaKnown RBP7.06□□□□□ -1.28
PTCD3-207ENST00000467273 PPP2R3BQ9Y5P8 575 aa7.06□□□□□ -1.28
PTCD3-207ENST00000467273 NR2E3Q9Y5X4 410 aa7.06□□□□□ -1.28
PTCD3-207ENST00000467273 IGF2BP3O00425 579 aaKnown RBP eCLIP7.05□□□□□ -1.28
PTCD3-207ENST00000467273 WNT10BO00744 389 aa7.05□□□□□ -1.28
PTCD3-207ENST00000467273 CYP26A1O43174 497 aa7.05□□□□□ -1.28
PTCD3-207ENST00000467273 UFL1O94874 794 aa7.05□□□□□ -1.28
PTCD3-207ENST00000467273 NEFMP07197 916 aa7.05□□□□□ -1.28
PTCD3-207ENST00000467273 ZNF16P17020 682 aaPredicted RBP7.05□□□□□ -1.28
PTCD3-207ENST00000467273 BRD2P25440 801 aaKnown RBP7.05□□□□□ -1.28
PTCD3-207ENST00000467273 DCTN1Q14203 1278 aa7.05□□□□□ -1.28
PTCD3-207ENST00000467273 NFKBIBQ15653 356 aa7.05□□□□□ -1.28
PTCD3-207ENST00000467273 NBPF9Q3BBW0 867 aa7.05□□□□□ -1.28
PTCD3-207ENST00000467273 ZNF648Q5T619 568 aaPredicted RBP7.05□□□□□ -1.28
PTCD3-207ENST00000467273 ALKBH2Q6NS38 261 aa7.05□□□□□ -1.28
PTCD3-207ENST00000467273 ATCAYQ86WG3 371 aa7.05□□□□□ -1.28
PTCD3-207ENST00000467273 GIPC2Q8TF65 315 aa7.05□□□□□ -1.28
PTCD3-207ENST00000467273 WNK4Q96J92 1243 aa7.05□□□□□ -1.28
PTCD3-207ENST00000467273 BABAM1Q9NWV8 329 aa7.05□□□□□ -1.28
PTCD3-207ENST00000467273 BRPF3Q9ULD4 1205 aa7.05□□□□□ -1.28
PTCD3-207ENST00000467273 NDUFB5O43674 189 aa7.04□□□□□ -1.28
PTCD3-207ENST00000467273 WDHD1O75717 1129 aaPredicted RBP7.04□□□□□ -1.28
PTCD3-207ENST00000467273 KIF4AO95239 1232 aa7.04□□□□□ -1.28
PTCD3-207ENST00000467273 U2AF1L5P0DN76 240 aaPredicted RBP7.04□□□□□ -1.28
PTCD3-207ENST00000467273 U2AF1Q01081 240 aaKnown RBP eCLIP7.04□□□□□ -1.28
PTCD3-207ENST00000467273 TAGLNQ01995 201 aaKnown RBP7.04□□□□□ -1.28
PTCD3-207ENST00000467273 CPSF6Q16630 551 aaKnown RBP eCLIP7.04□□□□□ -1.28
PTCD3-207ENST00000467273 CC2D1BQ5T0F9 858 aaKnown RBP7.04□□□□□ -1.28
PTCD3-207ENST00000467273 TMC7Q7Z402 723 aa7.04□□□□□ -1.28
PTCD3-207ENST00000467273 SHISA5Q8N114 240 aa7.04□□□□□ -1.28
PTCD3-207ENST00000467273 C12orf50Q8NA57 414 aaPredicted RBP7.04□□□□□ -1.28
PTCD3-207ENST00000467273 DPF3Q92784 378 aa7.04□□□□□ -1.28
PTCD3-207ENST00000467273 METTL22Q9BUU2 404 aaPredicted RBP7.04□□□□□ -1.28
PTCD3-207ENST00000467273 RBCK1Q9BYM8 510 aa7.04□□□□□ -1.28
PTCD3-207ENST00000467273 ADAM19Q9H013 955 aa7.04□□□□□ -1.28
PTCD3-207ENST00000467273 OSGEPQ9NPF4 335 aa7.04□□□□□ -1.28
PTCD3-207ENST00000467273 BSDC1Q9NW68 430 aaPredicted RBP7.04□□□□□ -1.28
PTCD3-207ENST00000467273 ABI2Q9NYB9 513 aaPredicted RBP7.04□□□□□ -1.28
PTCD3-207ENST00000467273 FAM13BQ9NYF5 915 aa7.04□□□□□ -1.28
PTCD3-207ENST00000467273 MIS18AQ9NYP9 233 aa7.04□□□□□ -1.28
PTCD3-207ENST00000467273 FNDC3AQ9Y2H6 1198 aaKnown RBP7.04□□□□□ -1.28
PTCD3-207ENST00000467273 STXBP5LQ9Y2K9 1186 aa7.04□□□□□ -1.28
PTCD3-207ENST00000467273 XDHP47989 1333 aa7.03□□□□□ -1.28
PTCD3-207ENST00000467273 DLG5Q8TDM6 1919 aa7.03□□□□□ -1.28
PTCD3-207ENST00000467273 FAM95CA0A1B0GW59 222 aa7.03□□□□□ -1.28
PTCD3-207ENST00000467273 KIF22Q14807 665 aa7.03□□□□□ -1.28
PTCD3-207ENST00000467273 COL19A1Q14993 1142 aa7.03□□□□□ -1.28
PTCD3-207ENST00000467273 ZNF124Q15973 351 aa7.03□□□□□ -1.28
PTCD3-207ENST00000467273 SUPT20HL1Q3ZLR7 823 aa7.03□□□□□ -1.28
PTCD3-207ENST00000467273 STRIP1Q5VSL9 837 aa7.03□□□□□ -1.28
PTCD3-207ENST00000467273 PRAMEF18Q5VWM3 479 aa7.03□□□□□ -1.28
PTCD3-207ENST00000467273 PAOXQ6QHF9 649 aa7.03□□□□□ -1.28
PTCD3-207ENST00000467273 COPS6Q7L5N1 327 aa7.03□□□□□ -1.28
PTCD3-207ENST00000467273 FBXO33Q7Z6M2 555 aa7.03□□□□□ -1.28
PTCD3-207ENST00000467273 UBE2Q1Q7Z7E8 422 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms