RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 LMNB2Q03252 620 aa7.88□□□□□ -1.15
TPM3-214ENST00000466010 FAM160A1Q05DH4 1040 aa7.88□□□□□ -1.15
TPM3-214ENST00000466010 IFRD2Q12894 506 aaPredicted RBP7.88□□□□□ -1.15
TPM3-214ENST00000466010 MTX1Q13505 466 aa7.88□□□□□ -1.15
TPM3-214ENST00000466010 CTC1Q2NKJ3 1217 aa7.88□□□□□ -1.15
TPM3-214ENST00000466010 FKBP1CQ5VVH2 108 aa7.88□□□□□ -1.15
TPM3-214ENST00000466010 PRICKLE2Q7Z3G6 844 aa7.88□□□□□ -1.15
TPM3-214ENST00000466010 ZNF598Q86UK7 904 aaKnown RBP7.88□□□□□ -1.15
TPM3-214ENST00000466010 DZIP1LQ8IYY4 767 aaKnown RBP7.88□□□□□ -1.15
TPM3-214ENST00000466010 CYP4X1Q8N118 509 aa7.88□□□□□ -1.15
TPM3-214ENST00000466010 LINC00528Q8N1L1 170 aa7.88□□□□□ -1.15
TPM3-214ENST00000466010 GOLM1Q8NBJ4 401 aa7.88□□□□□ -1.15
TPM3-214ENST00000466010 PRMT6Q96LA8 375 aaPredicted RBP7.88□□□□□ -1.15
TPM3-214ENST00000466010 ZDHHC15Q96MV8 337 aa7.88□□□□□ -1.15
TPM3-214ENST00000466010 VEZTQ9HBM0 779 aa7.88□□□□□ -1.15
TPM3-214ENST00000466010 LATS2Q9NRM7 1088 aa7.88□□□□□ -1.15
TPM3-214ENST00000466010 A0A1B0GUL6 1792 aa7.88□□□□□ -1.15
TPM3-214ENST00000466010 PDS5AQ29RF7 1337 aaKnown RBP7.87□□□□□ -1.15
TPM3-214ENST00000466010 ZBED9Q6R2W3 1325 aa7.87□□□□□ -1.15
TPM3-214ENST00000466010 MANSC4A6NHS7 340 aaPredicted RBP7.87□□□□□ -1.15
TPM3-214ENST00000466010 CCDC85CA6NKD9 419 aa7.87□□□□□ -1.15
TPM3-214ENST00000466010 GREM1O60565 184 aa7.87□□□□□ -1.15
TPM3-214ENST00000466010 PF4P02776 101 aa7.87□□□□□ -1.15
TPM3-214ENST00000466010 GNAI2P04899 355 aa7.87□□□□□ -1.15
TPM3-214ENST00000466010 TRIM27P14373 513 aa7.87□□□□□ -1.15
TPM3-214ENST00000466010 GRNP28799 593 aaKnown RBP7.87□□□□□ -1.15
TPM3-214ENST00000466010 CRKP46108 304 aa7.87□□□□□ -1.15
TPM3-214ENST00000466010 TM4SF4P48230 202 aa7.87□□□□□ -1.15
TPM3-214ENST00000466010 MAP3K10Q02779 954 aa7.87□□□□□ -1.15
TPM3-214ENST00000466010 ATP2B3Q16720 1220 aa7.87□□□□□ -1.15
TPM3-214ENST00000466010 PEAR1Q5VY43 1037 aaPredicted RBP7.87□□□□□ -1.15
TPM3-214ENST00000466010 ZKSCAN2Q63HK3 967 aa7.87□□□□□ -1.15
TPM3-214ENST00000466010 OTUD7BQ6GQQ9 843 aa7.87□□□□□ -1.15
TPM3-214ENST00000466010 HHIPL2Q6UWX4 724 aa7.87□□□□□ -1.15
TPM3-214ENST00000466010 DLK2Q6UY11 383 aa7.87□□□□□ -1.15
TPM3-214ENST00000466010 ATG9AQ7Z3C6 839 aa7.87□□□□□ -1.15
TPM3-214ENST00000466010 PGBD3Q8N328 593 aa7.87□□□□□ -1.15
TPM3-214ENST00000466010 APPBP2Q92624 585 aa7.87□□□□□ -1.15
TPM3-214ENST00000466010 CRBNQ96SW2 442 aa7.87□□□□□ -1.15
TPM3-214ENST00000466010 RNF186Q9NXI6 227 aa7.87□□□□□ -1.15
TPM3-214ENST00000466010 UBP1Q9NZI7 540 aa7.87□□□□□ -1.15
TPM3-214ENST00000466010 DENND2AQ9ULE3 1009 aa7.87□□□□□ -1.15
TPM3-214ENST00000466010 ANGEL1Q9UNK9 670 aaKnown RBP7.87□□□□□ -1.15
TPM3-214ENST00000466010 LRRFIP2Q9Y608 721 aaKnown RBP7.87□□□□□ -1.15
TPM3-214ENST00000466010 POLR2AP24928 1970 aaKnown RBP7.87□□□□□ -1.15
TPM3-214ENST00000466010 ARAP2Q8WZ64 1704 aa7.86□□□□□ -1.15
TPM3-214ENST00000466010 SALL1Q9NSC2 1324 aa7.86□□□□□ -1.15
TPM3-214ENST00000466010 UBE2Q2LH0YL09 131 aa7.86□□□□□ -1.15
TPM3-214ENST00000466010 J3QL48 77 aa7.86□□□□□ -1.15
TPM3-214ENST00000466010 SRGAP3O43295 1099 aa7.86□□□□□ -1.15
TPM3-214ENST00000466010 CTSOP43234 321 aaPredicted RBP7.86□□□□□ -1.15
TPM3-214ENST00000466010 CHAF1AQ13111 956 aaPredicted RBP7.86□□□□□ -1.15
TPM3-214ENST00000466010 CAMK2GQ13555 558 aaPredicted RBP7.86□□□□□ -1.15
TPM3-214ENST00000466010 MVPQ14764 893 aaKnown RBP7.86□□□□□ -1.15
TPM3-214ENST00000466010 PKN2Q16513 984 aaKnown RBP7.86□□□□□ -1.15
TPM3-214ENST00000466010 SAMD5Q5TGI4 173 aa7.86□□□□□ -1.15
TPM3-214ENST00000466010 FAM83AQ86UY5 434 aa7.86□□□□□ -1.15
TPM3-214ENST00000466010 FTSJ3Q8IY81 847 aaKnown RBP7.86□□□□□ -1.15
TPM3-214ENST00000466010 OR13H1Q8NG92 308 aa7.86□□□□□ -1.15
TPM3-214ENST00000466010 KLHDC4Q8TBB5 520 aa7.86□□□□□ -1.15
TPM3-214ENST00000466010 FRAT1Q92837 279 aaPredicted RBP7.86□□□□□ -1.15
TPM3-214ENST00000466010 MEIS3Q99687 375 aa7.86□□□□□ -1.15
TPM3-214ENST00000466010 CCDC113Q9H0I3 377 aa7.86□□□□□ -1.15
TPM3-214ENST00000466010 CRISPLD1Q9H336 500 aa7.86□□□□□ -1.15
TPM3-214ENST00000466010 PCDH12Q9NPG4 1184 aa7.86□□□□□ -1.15
TPM3-214ENST00000466010 ZNF70Q9UC06 446 aaPredicted RBP7.86□□□□□ -1.15
TPM3-214ENST00000466010 KCNH4Q9UQ05 1017 aa7.86□□□□□ -1.15
TPM3-214ENST00000466010 JAG2Q9Y219 1238 aa7.86□□□□□ -1.15
TPM3-214ENST00000466010 RPAP1Q9BWH6 1393 aaPredicted RBP7.85□□□□□ -1.15
TPM3-214ENST00000466010 ECM29Q5VYK3 1845 aa7.85□□□□□ -1.15
TPM3-214ENST00000466010 CLRN2A0PK11 232 aa7.85□□□□□ -1.15
TPM3-214ENST00000466010 SMAD7O15105 426 aaKnown RBP7.85□□□□□ -1.15
TPM3-214ENST00000466010 WDHD1O75717 1129 aaPredicted RBP7.85□□□□□ -1.15
TPM3-214ENST00000466010 TRPA1O75762 1119 aa7.85□□□□□ -1.15
TPM3-214ENST00000466010 CYP2E1P05181 493 aaPredicted RBP7.85□□□□□ -1.15
TPM3-214ENST00000466010 GARTP22102 1010 aa7.85□□□□□ -1.15
TPM3-214ENST00000466010 RPS26P62854 115 aaKnown RBP7.85□□□□□ -1.15
TPM3-214ENST00000466010 GRIN2CQ14957 1233 aa7.85□□□□□ -1.15
TPM3-214ENST00000466010 ARSHQ5FYA8 562 aa7.85□□□□□ -1.15
TPM3-214ENST00000466010 PRAMEF18Q5VWM3 479 aa7.85□□□□□ -1.15
TPM3-214ENST00000466010 DCAF15Q66K64 600 aa7.85□□□□□ -1.15
TPM3-214ENST00000466010 SPTY2D1Q68D10 685 aaPredicted RBP7.85□□□□□ -1.15
TPM3-214ENST00000466010 TTBK2Q6IQ55 1244 aa7.85□□□□□ -1.15
TPM3-214ENST00000466010 NLRP8Q86W28 1048 aa7.85□□□□□ -1.15
TPM3-214ENST00000466010 NCAPG2Q86XI2 1143 aa7.85□□□□□ -1.15
TPM3-214ENST00000466010 HOMER1Q86YM7 354 aa7.85□□□□□ -1.15
TPM3-214ENST00000466010 SLITRK4Q8IW52 837 aa7.85□□□□□ -1.15
TPM3-214ENST00000466010 RNF217Q8TC41 542 aa7.85□□□□□ -1.15
TPM3-214ENST00000466010 SH3TC2Q8TF17 1288 aa7.85□□□□□ -1.15
TPM3-214ENST00000466010 ABHD8Q96I13 439 aa7.85□□□□□ -1.15
TPM3-214ENST00000466010 SIL1Q9H173 461 aa7.85□□□□□ -1.15
TPM3-214ENST00000466010 CHMP4BQ9H444 224 aaKnown RBP7.85□□□□□ -1.15
TPM3-214ENST00000466010 FANCLQ9NW38 375 aa7.85□□□□□ -1.15
TPM3-214ENST00000466010 PKD2L1Q9P0L9 805 aa7.85□□□□□ -1.15
TPM3-214ENST00000466010 SALL4Q9UJQ4 1053 aa7.85□□□□□ -1.15
TPM3-214ENST00000466010 TLR6Q9Y2C9 796 aa7.85□□□□□ -1.15
TPM3-214ENST00000466010 SASH3O75995 380 aa7.84□□□□□ -1.15
TPM3-214ENST00000466010 MAP4K4O95819 1239 aaPredicted RBP7.84□□□□□ -1.15
TPM3-214ENST00000466010 PSAPP07602 524 aa7.84□□□□□ -1.15
TPM3-214ENST00000466010 CELA3AP09093 270 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms