RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 NFIBO00712 420 aa12.23□□□□□ -0.45
GPNMB-206ENST00000465673 ZEB2O60315 1214 aa12.23□□□□□ -0.45
GPNMB-206ENST00000465673 ZFYP08048 801 aaPredicted RBP12.23□□□□□ -0.45
GPNMB-206ENST00000465673 MYL3P08590 195 aa12.23□□□□□ -0.45
GPNMB-206ENST00000465673 BMP1P13497 986 aa12.23□□□□□ -0.45
GPNMB-206ENST00000465673 ATP2A2P16615 1042 aaKnown RBP12.23□□□□□ -0.45
GPNMB-206ENST00000465673 SKIV2LQ15477 1246 aaKnown RBP12.23□□□□□ -0.45
GPNMB-206ENST00000465673 TKFCQ3LXA3 575 aa12.23□□□□□ -0.45
GPNMB-206ENST00000465673 SPRED2Q7Z698 418 aa12.23□□□□□ -0.45
GPNMB-206ENST00000465673 RPUSD2Q8IZ73 545 aaKnown RBP12.23□□□□□ -0.45
GPNMB-206ENST00000465673 NACAP1Q9BZK3 213 aa12.23□□□□□ -0.45
GPNMB-206ENST00000465673 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.23□□□□□ -0.45
GPNMB-206ENST00000465673 PRRC2BQ5JSZ5 2229 aaKnown RBP12.23□□□□□ -0.45
GPNMB-206ENST00000465673 LCTP09848 1927 aa12.23□□□□□ -0.45
GPNMB-206ENST00000465673 TNKSO95271 1327 aa12.22□□□□□ -0.45
GPNMB-206ENST00000465673 TSPY2A6NKD2 308 aa12.22□□□□□ -0.45
GPNMB-206ENST00000465673 CA3P07451 260 aa12.22□□□□□ -0.45
GPNMB-206ENST00000465673 CCDC96Q2M329 555 aa12.22□□□□□ -0.45
GPNMB-206ENST00000465673 ZMYM1Q5SVZ6 1142 aa12.22□□□□□ -0.45
GPNMB-206ENST00000465673 VPS53Q5VIR6 699 aa12.22□□□□□ -0.45
GPNMB-206ENST00000465673 IL27Q8NEV9 243 aa12.22□□□□□ -0.45
GPNMB-206ENST00000465673 PI4K2BQ8TCG2 481 aa12.22□□□□□ -0.45
GPNMB-206ENST00000465673 MORC4Q8TE76 937 aa12.22□□□□□ -0.45
GPNMB-206ENST00000465673 COPS5Q92905 334 aa12.22□□□□□ -0.45
GPNMB-206ENST00000465673 GPATCH3Q96I76 525 aa12.22□□□□□ -0.45
GPNMB-206ENST00000465673 WDR11Q9BZH6 1224 aa12.22□□□□□ -0.45
GPNMB-206ENST00000465673 CHMP4BQ9H444 224 aaKnown RBP12.22□□□□□ -0.45
GPNMB-206ENST00000465673 VTA1Q9NP79 307 aa12.22□□□□□ -0.45
GPNMB-206ENST00000465673 Q9Y3F1 56 aa12.22□□□□□ -0.45
GPNMB-206ENST00000465673 PCDHA11Q9Y5I1 949 aa12.22□□□□□ -0.45
GPNMB-206ENST00000465673 SCN5AQ14524 2016 aa12.21□□□□□ -0.45
GPNMB-206ENST00000465673 XIRP2A4UGR9 3374 aa12.21□□□□□ -0.45
GPNMB-206ENST00000465673 FRMPD2Q68DX3 1309 aaPredicted RBP12.21□□□□□ -0.45
GPNMB-206ENST00000465673 RANBP6O60518 1105 aaKnown RBP12.21□□□□□ -0.45
GPNMB-206ENST00000465673 PLA2G6O60733 806 aa12.21□□□□□ -0.45
GPNMB-206ENST00000465673 SLC3A2P08195 630 aaKnown RBP12.21□□□□□ -0.45
GPNMB-206ENST00000465673 ALDH5A1P51649 535 aaPredicted RBP12.21□□□□□ -0.45
GPNMB-206ENST00000465673 PURAQ00577 322 aaKnown RBP12.21□□□□□ -0.45
GPNMB-206ENST00000465673 NBPF20Q3BBV1 942 aa12.21□□□□□ -0.45
GPNMB-206ENST00000465673 DUSP28Q4G0W2 176 aa12.21□□□□□ -0.45
GPNMB-206ENST00000465673 FAM47CQ5HY64 1035 aa12.21□□□□□ -0.45
GPNMB-206ENST00000465673 SLC30A10Q6XR72 485 aa12.21□□□□□ -0.45
GPNMB-206ENST00000465673 FSD1Q9BTV5 496 aa12.21□□□□□ -0.45
GPNMB-206ENST00000465673 GPCPD1Q9NPB8 672 aa12.21□□□□□ -0.45
GPNMB-206ENST00000465673 MTCH2Q9Y6C9 303 aa12.21□□□□□ -0.45
GPNMB-206ENST00000465673 PTPDC1A2A3K4 754 aa12.2□□□□□ -0.46
GPNMB-206ENST00000465673 ICAM1P05362 532 aa12.2□□□□□ -0.46
GPNMB-206ENST00000465673 CALML3P27482 149 aa12.2□□□□□ -0.46
GPNMB-206ENST00000465673 CHMP4BP1P59074 171 aa12.2□□□□□ -0.46
GPNMB-206ENST00000465673 TMEM67Q5HYA8 995 aa12.2□□□□□ -0.46
GPNMB-206ENST00000465673 TMCO2Q7Z6W1 182 aaPredicted RBP12.2□□□□□ -0.46
GPNMB-206ENST00000465673 OR6J1Q8NGC5 347 aa12.2□□□□□ -0.46
GPNMB-206ENST00000465673 CLEC4DQ8WXI8 215 aa12.2□□□□□ -0.46
GPNMB-206ENST00000465673 ARNTL2Q8WYA1 636 aa12.2□□□□□ -0.46
GPNMB-206ENST00000465673 RANBP17Q9H2T7 1088 aaKnown RBP12.2□□□□□ -0.46
GPNMB-206ENST00000465673 SUPT20HL2P0C7V6 817 aa12.19□□□□□ -0.46
GPNMB-206ENST00000465673 TAP1Q03518 808 aa12.19□□□□□ -0.46
GPNMB-206ENST00000465673 SYDE2Q5VT97 1194 aa12.19□□□□□ -0.46
GPNMB-206ENST00000465673 MTG1Q9BT17 334 aaPredicted RBP12.19□□□□□ -0.46
GPNMB-206ENST00000465673 TSPYL2Q9H2G4 693 aaPredicted RBP12.19□□□□□ -0.46
GPNMB-206ENST00000465673 EPHX3Q9H6B9 360 aa12.19□□□□□ -0.46
GPNMB-206ENST00000465673 POLR3EQ9NVU0 708 aa12.19□□□□□ -0.46
GPNMB-206ENST00000465673 RBM47A0AV96 593 aaKnown RBP12.18□□□□□ -0.46
GPNMB-206ENST00000465673 ERC2O15083 957 aa12.18□□□□□ -0.46
GPNMB-206ENST00000465673 IQCF3P0C7M6 154 aa12.18□□□□□ -0.46
GPNMB-206ENST00000465673 NOVP48745 357 aa12.18□□□□□ -0.46
GPNMB-206ENST00000465673 RRP12Q5JTH9 1297 aaKnown RBP12.18□□□□□ -0.46
GPNMB-206ENST00000465673 DCAF4Q8WV16 495 aa12.18□□□□□ -0.46
GPNMB-206ENST00000465673 KHSRPQ92945 711 aaKnown RBP eCLIP12.18□□□□□ -0.46
GPNMB-206ENST00000465673 TMEM47Q9BQJ4 181 aa12.18□□□□□ -0.46
GPNMB-206ENST00000465673 SEZ6LQ9BYH1 1024 aa12.18□□□□□ -0.46
GPNMB-206ENST00000465673 FTOQ9C0B1 505 aaKnown RBP eCLIP12.18□□□□□ -0.46
GPNMB-206ENST00000465673 GPHNQ9NQX3 736 aaPredicted RBP12.18□□□□□ -0.46
GPNMB-206ENST00000465673 ADD3Q9UEY8 706 aaKnown RBP12.18□□□□□ -0.46
GPNMB-206ENST00000465673 PCDHB15Q9Y5E8 787 aa12.18□□□□□ -0.46
GPNMB-206ENST00000465673 TET1Q8NFU7 2136 aa12.17□□□□□ -0.46
GPNMB-206ENST00000465673 TTC41PQ6P2S7 1318 aa12.17□□□□□ -0.46
GPNMB-206ENST00000465673 LCHNA4D1U4 455 aa12.17□□□□□ -0.46
GPNMB-206ENST00000465673 ARIH2O95376 493 aa12.17□□□□□ -0.46
GPNMB-206ENST00000465673 PFKMP08237 780 aa12.17□□□□□ -0.46
GPNMB-206ENST00000465673 PLA2G5P39877 138 aa12.17□□□□□ -0.46
GPNMB-206ENST00000465673 CPT1AP50416 773 aa12.17□□□□□ -0.46
GPNMB-206ENST00000465673 GPNMBQ14956 572 aa12.17□□□□□ -0.46
GPNMB-206ENST00000465673 LRRFIP1Q32MZ4 808 aaKnown RBP12.17□□□□□ -0.46
GPNMB-206ENST00000465673 DIEXFQ68CQ4 756 aaKnown RBP12.17□□□□□ -0.46
GPNMB-206ENST00000465673 BTNL9Q6UXG8 535 aa12.17□□□□□ -0.46
GPNMB-206ENST00000465673 RNF207Q6ZRF8 634 aa12.17□□□□□ -0.46
GPNMB-206ENST00000465673 HERC6Q8IVU3 1022 aa12.17□□□□□ -0.46
GPNMB-206ENST00000465673 CPVLQ9H3G5 476 aa12.17□□□□□ -0.46
GPNMB-206ENST00000465673 TOMM22Q9NS69 142 aa12.17□□□□□ -0.46
GPNMB-206ENST00000465673 GTPBP6O43824 516 aaPredicted RBP12.16□□□□□ -0.46
GPNMB-206ENST00000465673 TLL1O43897 1013 aa12.16□□□□□ -0.46
GPNMB-206ENST00000465673 ORC4O43929 436 aa12.16□□□□□ -0.46
GPNMB-206ENST00000465673 LPXNO60711 386 aa12.16□□□□□ -0.46
GPNMB-206ENST00000465673 TOP1P11387 765 aaKnown RBP12.16□□□□□ -0.46
GPNMB-206ENST00000465673 ACTN1P12814 892 aa12.16□□□□□ -0.46
GPNMB-206ENST00000465673 POU3F3P20264 500 aaPredicted RBP12.16□□□□□ -0.46
GPNMB-206ENST00000465673 RPS6P62753 249 aaKnown RBP12.16□□□□□ -0.46
GPNMB-206ENST00000465673 PDE4DQ08499 809 aa12.16□□□□□ -0.46
GPNMB-206ENST00000465673 GRB10Q13322 594 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms