RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 OGDHLQ9ULD0 1010 aa18.79■□□□□ 0.6
SHANK1-205ENST00000461154 CNTNAP5Q8WYK1 1306 aa18.78■□□□□ 0.6
SHANK1-205ENST00000461154 BAZ2BQ9UIF8 2168 aaKnown RBP18.78■□□□□ 0.6
SHANK1-205ENST00000461154 PPP1R11O60927 126 aaPredicted RBP18.78■□□□□ 0.6
SHANK1-205ENST00000461154 CDC27P30260 824 aa18.78■□□□□ 0.6
SHANK1-205ENST00000461154 FAM133AQ8N9E0 248 aa18.78■□□□□ 0.6
SHANK1-205ENST00000461154 FAM217BQ9NTX9 383 aaPredicted RBP18.78■□□□□ 0.6
SHANK1-205ENST00000461154 ADD1P35611 737 aaKnown RBP18.77■□□□□ 0.6
SHANK1-205ENST00000461154 AK2P54819 239 aa18.77■□□□□ 0.6
SHANK1-205ENST00000461154 BAATQ14032 418 aaPredicted RBP18.77■□□□□ 0.6
SHANK1-205ENST00000461154 LHX8Q68G74 356 aa18.77■□□□□ 0.6
SHANK1-205ENST00000461154 UBE2Q1Q7Z7E8 422 aa18.77■□□□□ 0.6
SHANK1-205ENST00000461154 SAMD3Q8N6K7 520 aa18.77■□□□□ 0.6
SHANK1-205ENST00000461154 IL27Q8NEV9 243 aa18.77■□□□□ 0.6
SHANK1-205ENST00000461154 RBM27Q9P2N5 1060 aaKnown RBP18.77■□□□□ 0.6
SHANK1-205ENST00000461154 ADD3Q9UEY8 706 aaKnown RBP18.77■□□□□ 0.6
SHANK1-205ENST00000461154 DDX20Q9UHI6 824 aaKnown RBP18.77■□□□□ 0.6
SHANK1-205ENST00000461154 RPS6P62753 249 aaKnown RBP18.76■□□□□ 0.59
SHANK1-205ENST00000461154 CCT2P78371 535 aaKnown RBP18.76■□□□□ 0.59
SHANK1-205ENST00000461154 FUT2Q10981 343 aa18.76■□□□□ 0.59
SHANK1-205ENST00000461154 CPLX2Q6PUV4 134 aaKnown RBP18.76■□□□□ 0.59
SHANK1-205ENST00000461154 MAMDC4Q6UXC1 1216 aa18.76■□□□□ 0.59
SHANK1-205ENST00000461154 TRPV1Q8NER1 839 aa18.76■□□□□ 0.59
SHANK1-205ENST00000461154 MPHOSPH6Q99547 160 aaKnown RBP18.76■□□□□ 0.59
SHANK1-205ENST00000461154 LARP6Q9BRS8 491 aaKnown RBP18.76■□□□□ 0.59
SHANK1-205ENST00000461154 MAP3K20Q9NYL2 800 aaKnown RBP18.76■□□□□ 0.59
SHANK1-205ENST00000461154 CNPY2Q9Y2B0 182 aa18.76■□□□□ 0.59
SHANK1-205ENST00000461154 CENPFP49454 3210 aa18.76■□□□□ 0.59
SHANK1-205ENST00000461154 SYNGAP1Q96PV0 1343 aa18.75■□□□□ 0.59
SHANK1-205ENST00000461154 LOC102724159A0A0B4J2E5 919 aa18.75■□□□□ 0.59
SHANK1-205ENST00000461154 ASB14A6NK59 587 aa18.75■□□□□ 0.59
SHANK1-205ENST00000461154 CPLX1O14810 134 aa18.75■□□□□ 0.59
SHANK1-205ENST00000461154 SEPT4O43236 478 aa18.75■□□□□ 0.59
SHANK1-205ENST00000461154 CALML3P27482 149 aa18.75■□□□□ 0.59
SHANK1-205ENST00000461154 AKAP17AQ02040 695 aaKnown RBP18.75■□□□□ 0.59
SHANK1-205ENST00000461154 CNTN2Q02246 1040 aa18.75■□□□□ 0.59
SHANK1-205ENST00000461154 PWP2Q15269 919 aaKnown RBP18.75■□□□□ 0.59
SHANK1-205ENST00000461154 RABEP1Q15276 862 aa18.75■□□□□ 0.59
SHANK1-205ENST00000461154 PRAMEF19Q5SWL8 479 aa18.75■□□□□ 0.59
SHANK1-205ENST00000461154 SLC30A10Q6XR72 485 aa18.75■□□□□ 0.59
SHANK1-205ENST00000461154 NECAB2Q7Z6G3 386 aa18.75■□□□□ 0.59
SHANK1-205ENST00000461154 TBC1D32Q96NH3 1257 aa18.75■□□□□ 0.59
SHANK1-205ENST00000461154 KIF2CQ99661 725 aa18.75■□□□□ 0.59
SHANK1-205ENST00000461154 HTATIP2Q9BUP3 242 aa18.75■□□□□ 0.59
SHANK1-205ENST00000461154 SLKQ9H2G2 1235 aaPredicted RBP18.75■□□□□ 0.59
SHANK1-205ENST00000461154 B4DLN1 442 aa18.74■□□□□ 0.59
SHANK1-205ENST00000461154 hCG_1984214I3L0E3 225 aa18.74■□□□□ 0.59
SHANK1-205ENST00000461154 CFBP00751 764 aa18.74■□□□□ 0.59
SHANK1-205ENST00000461154 MRPL12P52815 198 aaKnown RBP18.74■□□□□ 0.59
SHANK1-205ENST00000461154 STK3Q13188 491 aa18.74■□□□□ 0.59
SHANK1-205ENST00000461154 HEATR3Q7Z4Q2 680 aa18.74■□□□□ 0.59
SHANK1-205ENST00000461154 ZNF713Q8N859 430 aaPredicted RBP18.74■□□□□ 0.59
SHANK1-205ENST00000461154 DNERQ8NFT8 737 aa18.74■□□□□ 0.59
SHANK1-205ENST00000461154 PAWRQ96IZ0 340 aaKnown RBP18.74■□□□□ 0.59
SHANK1-205ENST00000461154 NCOA5Q9HCD5 579 aaKnown RBP18.74■□□□□ 0.59
SHANK1-205ENST00000461154 TPCN1Q9ULQ1 816 aa18.74■□□□□ 0.59
SHANK1-205ENST00000461154 V9GY48 417 aaPredicted RBP18.74■□□□□ 0.59
SHANK1-205ENST00000461154 hCG_1642624A0A1W2PR95 340 aa18.73■□□□□ 0.59
SHANK1-205ENST00000461154 SOWAHBA6NEL2 793 aa18.73■□□□□ 0.59
SHANK1-205ENST00000461154 CDKL5O76039 1030 aa18.73■□□□□ 0.59
SHANK1-205ENST00000461154 IFNAR1P17181 557 aa18.73■□□□□ 0.59
SHANK1-205ENST00000461154 GHRHRQ02643 423 aa18.73■□□□□ 0.59
SHANK1-205ENST00000461154 TRIM22Q8IYM9 498 aa18.73■□□□□ 0.59
SHANK1-205ENST00000461154 FGD4Q96M96 766 aa18.73■□□□□ 0.59
SHANK1-205ENST00000461154 RNF26Q9BY78 433 aaPredicted RBP18.73■□□□□ 0.59
SHANK1-205ENST00000461154 GCOM1H8Y6P7 765 aaPredicted RBP18.72■□□□□ 0.59
SHANK1-205ENST00000461154 PRPF3O43395 683 aaKnown RBP18.72■□□□□ 0.59
SHANK1-205ENST00000461154 ST18O60284 1047 aa18.72■□□□□ 0.59
SHANK1-205ENST00000461154 PFKFB2O60825 505 aa18.72■□□□□ 0.59
SHANK1-205ENST00000461154 SNAI1O95863 264 aaPredicted RBP18.72■□□□□ 0.59
SHANK1-205ENST00000461154 POLR2MP0CAP2 368 aa18.72■□□□□ 0.59
SHANK1-205ENST00000461154 ALDH5A1P51649 535 aaPredicted RBP18.72■□□□□ 0.59
SHANK1-205ENST00000461154 HSD17B4P51659 736 aa18.72■□□□□ 0.59
SHANK1-205ENST00000461154 NTRK3Q16288 839 aa18.72■□□□□ 0.59
SHANK1-205ENST00000461154 PPP1R18Q6NYC8 613 aa18.72■□□□□ 0.59
SHANK1-205ENST00000461154 NOL8Q76FK4 1167 aaKnown RBP18.72■□□□□ 0.59
SHANK1-205ENST00000461154 ARMCX2Q7L311 632 aa18.72■□□□□ 0.59
SHANK1-205ENST00000461154 ARRDC4Q8NCT1 418 aa18.72■□□□□ 0.59
SHANK1-205ENST00000461154 SYTL5Q8TDW5 730 aaPredicted RBP18.72■□□□□ 0.59
SHANK1-205ENST00000461154 CUL5Q93034 780 aa18.72■□□□□ 0.59
SHANK1-205ENST00000461154 LCTP09848 1927 aa18.72■□□□□ 0.59
SHANK1-205ENST00000461154 OPLAHO14841 1288 aa18.71■□□□□ 0.59
SHANK1-205ENST00000461154 ZNF865P0CJ78 1059 aaPredicted RBP18.71■□□□□ 0.59
SHANK1-205ENST00000461154 AKR1A1P14550 325 aa18.71■□□□□ 0.59
SHANK1-205ENST00000461154 MNX1P50219 401 aaPredicted RBP18.71■□□□□ 0.59
SHANK1-205ENST00000461154 SSRP1Q08945 709 aaKnown RBP18.71■□□□□ 0.59
SHANK1-205ENST00000461154 PFKFB3Q16875 520 aaPredicted RBP18.71■□□□□ 0.59
SHANK1-205ENST00000461154 TBC1D5Q92609 795 aa18.71■□□□□ 0.59
SHANK1-205ENST00000461154 DPF3Q92784 378 aa18.71■□□□□ 0.59
SHANK1-205ENST00000461154 PHKBQ93100 1093 aa18.71■□□□□ 0.59
SHANK1-205ENST00000461154 SLC26A6Q9BXS9 759 aa18.71■□□□□ 0.59
SHANK1-205ENST00000461154 ABHD16BQ9H3Z7 469 aa18.71■□□□□ 0.59
SHANK1-205ENST00000461154 C11orf49Q9H6J7 331 aa18.71■□□□□ 0.59
SHANK1-205ENST00000461154 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.71■□□□□ 0.59
SHANK1-205ENST00000461154 RARBP10826 455 aa18.7■□□□□ 0.58
SHANK1-205ENST00000461154 SCG2P13521 617 aa18.7■□□□□ 0.58
SHANK1-205ENST00000461154 NAPAP54920 295 aa18.7■□□□□ 0.58
SHANK1-205ENST00000461154 SCRN1Q12765 414 aa18.7■□□□□ 0.58
SHANK1-205ENST00000461154 PRPF38BQ5VTL8 546 aaKnown RBP18.7■□□□□ 0.58
SHANK1-205ENST00000461154 WWC2Q6AWC2 1192 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms