RNA–Protein interactions for RNA: ENST00000461063.6

SOX2-OT-202, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 566 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-202ENST00000461063 RWDD1Q9H446 243 aaPredicted RBP10.36□□□□□ -0.75
SOX2-OT-202ENST00000461063 GPCPD1Q9NPB8 672 aa10.36□□□□□ -0.75
SOX2-OT-202ENST00000461063 PDGFCQ9NRA1 345 aa10.36□□□□□ -0.75
SOX2-OT-202ENST00000461063 GNEQ9Y223 722 aaKnown RBP10.36□□□□□ -0.75
SOX2-OT-202ENST00000461063 NFIBO00712 420 aa10.35□□□□□ -0.75
SOX2-OT-202ENST00000461063 IGHDP01880 384 aa10.35□□□□□ -0.75
SOX2-OT-202ENST00000461063 PDHBP11177 359 aa10.35□□□□□ -0.75
SOX2-OT-202ENST00000461063 SDSP20132 328 aa10.35□□□□□ -0.75
SOX2-OT-202ENST00000461063 BAATQ14032 418 aaPredicted RBP10.35□□□□□ -0.75
SOX2-OT-202ENST00000461063 GSE1Q14687 1217 aa10.35□□□□□ -0.75
SOX2-OT-202ENST00000461063 AKNAD1Q5T1N1 836 aa10.35□□□□□ -0.75
SOX2-OT-202ENST00000461063 TMEM63BQ5T3F8 832 aa10.35□□□□□ -0.75
SOX2-OT-202ENST00000461063 IQSEC1Q6DN90 963 aa10.35□□□□□ -0.75
SOX2-OT-202ENST00000461063 MFSD5Q6N075 450 aa10.35□□□□□ -0.75
SOX2-OT-202ENST00000461063 CXCL17Q6UXB2 119 aa10.35□□□□□ -0.75
SOX2-OT-202ENST00000461063 MFSD6Q6ZSS7 791 aa10.35□□□□□ -0.75
SOX2-OT-202ENST00000461063 EEPD1Q7L9B9 569 aa10.35□□□□□ -0.75
SOX2-OT-202ENST00000461063 TLK2Q86UE8 772 aa10.35□□□□□ -0.75
SOX2-OT-202ENST00000461063 CHD1LQ86WJ1 897 aa10.35□□□□□ -0.75
SOX2-OT-202ENST00000461063 TBC1D10CQ8IV04 446 aa10.35□□□□□ -0.75
SOX2-OT-202ENST00000461063 PLEKHM2Q8IWE5 1019 aa10.35□□□□□ -0.75
SOX2-OT-202ENST00000461063 FBXO16Q8IX29 292 aaPredicted RBP10.35□□□□□ -0.75
SOX2-OT-202ENST00000461063 FAM126BQ8IXS8 530 aa10.35□□□□□ -0.75
SOX2-OT-202ENST00000461063 SLC43A3Q8NBI5 491 aa10.35□□□□□ -0.75
SOX2-OT-202ENST00000461063 MORC4Q8TE76 937 aa10.35□□□□□ -0.75
SOX2-OT-202ENST00000461063 YTHDC1Q96MU7 727 aaKnown RBP10.35□□□□□ -0.75
SOX2-OT-202ENST00000461063 TTC14Q96N46 770 aa10.35□□□□□ -0.75
SOX2-OT-202ENST00000461063 CDX2Q99626 313 aaPredicted RBP10.35□□□□□ -0.75
SOX2-OT-202ENST00000461063 AP5M1Q9H0R1 490 aa10.35□□□□□ -0.75
SOX2-OT-202ENST00000461063 TTYH1Q9H313 450 aaPredicted RBP10.35□□□□□ -0.75
SOX2-OT-202ENST00000461063 OSBPL3Q9H4L5 887 aa10.35□□□□□ -0.75
SOX2-OT-202ENST00000461063 DYNC1LI2O43237 492 aaPredicted RBP10.34□□□□□ -0.75
SOX2-OT-202ENST00000461063 CD4P01730 458 aa10.34□□□□□ -0.75
SOX2-OT-202ENST00000461063 SNHG28P0DPA3 235 aa10.34□□□□□ -0.75
SOX2-OT-202ENST00000461063 PCP11498 1178 aaKnown RBP10.34□□□□□ -0.75
SOX2-OT-202ENST00000461063 MFAP1P55081 439 aaKnown RBP10.34□□□□□ -0.75
SOX2-OT-202ENST00000461063 NUCB1Q02818 461 aa10.34□□□□□ -0.75
SOX2-OT-202ENST00000461063 ZNF543Q08ER8 600 aa10.34□□□□□ -0.75
SOX2-OT-202ENST00000461063 FSCN1Q16658 493 aaKnown RBP10.34□□□□□ -0.75
SOX2-OT-202ENST00000461063 C16orf59Q7L2K0 433 aa10.34□□□□□ -0.75
SOX2-OT-202ENST00000461063 IFNLR1Q8IU57 520 aaPredicted RBP10.34□□□□□ -0.75
SOX2-OT-202ENST00000461063 CLEC4DQ8WXI8 215 aa10.34□□□□□ -0.75
SOX2-OT-202ENST00000461063 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.34□□□□□ -0.75
SOX2-OT-202ENST00000461063 RNF41Q9H4P4 317 aaPredicted RBP10.34□□□□□ -0.75
SOX2-OT-202ENST00000461063 VTA1Q9NP79 307 aa10.34□□□□□ -0.75
SOX2-OT-202ENST00000461063 ADD3Q9UEY8 706 aaKnown RBP10.34□□□□□ -0.75
SOX2-OT-202ENST00000461063 Q9Y3F1 56 aa10.34□□□□□ -0.75
SOX2-OT-202ENST00000461063 CHD9Q3L8U1 2897 aa10.34□□□□□ -0.75
SOX2-OT-202ENST00000461063 GRIN2DO15399 1336 aa10.33□□□□□ -0.76
SOX2-OT-202ENST00000461063 NEDD4P46934 1319 aa10.33□□□□□ -0.76
SOX2-OT-202ENST00000461063 VCANP13611 3396 aa10.33□□□□□ -0.76
SOX2-OT-202ENST00000461063 SPTBN5Q9NRC6 3674 aaKnown RBP10.33□□□□□ -0.76
SOX2-OT-202ENST00000461063 TMEM265A0A087WTH1 108 aa10.33□□□□□ -0.76
SOX2-OT-202ENST00000461063 TLR3O15455 904 aaKnown RBP10.33□□□□□ -0.76
SOX2-OT-202ENST00000461063 CABYRO75952 493 aa10.33□□□□□ -0.76
SOX2-OT-202ENST00000461063 CSF2RAP15509 400 aa10.33□□□□□ -0.76
SOX2-OT-202ENST00000461063 ALDH5A1P51649 535 aaPredicted RBP10.33□□□□□ -0.76
SOX2-OT-202ENST00000461063 PPIGQ13427 754 aaKnown RBP eCLIP10.33□□□□□ -0.76
SOX2-OT-202ENST00000461063 SLC30A10Q6XR72 485 aa10.33□□□□□ -0.76
SOX2-OT-202ENST00000461063 KIAA1211Q6ZU35 1233 aa10.33□□□□□ -0.76
SOX2-OT-202ENST00000461063 ESR2Q92731 530 aa10.33□□□□□ -0.76
SOX2-OT-202ENST00000461063 PPP1R12CQ9BZL4 782 aa10.33□□□□□ -0.76
SOX2-OT-202ENST00000461063 WDR19Q8NEZ3 1342 aa10.33□□□□□ -0.76
SOX2-OT-202ENST00000461063 PRUNE2Q8WUY3 3088 aa10.32□□□□□ -0.76
SOX2-OT-202ENST00000461063 LOC102724159A0A0B4J2E5 919 aa10.32□□□□□ -0.76
SOX2-OT-202ENST00000461063 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.32□□□□□ -0.76
SOX2-OT-202ENST00000461063 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.32□□□□□ -0.76
SOX2-OT-202ENST00000461063 RBM47A0AV96 593 aaKnown RBP10.32□□□□□ -0.76
SOX2-OT-202ENST00000461063 PTPDC1A2A3K4 754 aa10.32□□□□□ -0.76
SOX2-OT-202ENST00000461063 ZNF213O14771 459 aa10.32□□□□□ -0.76
SOX2-OT-202ENST00000461063 ZEB2O60315 1214 aa10.32□□□□□ -0.76
SOX2-OT-202ENST00000461063 DNAJB2P25686 324 aa10.32□□□□□ -0.76
SOX2-OT-202ENST00000461063 CYP2C18P33260 490 aa10.32□□□□□ -0.76
SOX2-OT-202ENST00000461063 ITGA7Q13683 1181 aa10.32□□□□□ -0.76
SOX2-OT-202ENST00000461063 PWP2Q15269 919 aaKnown RBP10.32□□□□□ -0.76
SOX2-OT-202ENST00000461063 DUSP28Q4G0W2 176 aa10.32□□□□□ -0.76
SOX2-OT-202ENST00000461063 TMEM240Q5SV17 173 aa10.32□□□□□ -0.76
SOX2-OT-202ENST00000461063 RASIP1Q5U651 963 aa10.32□□□□□ -0.76
SOX2-OT-202ENST00000461063 CWC27Q6UX04 472 aaKnown RBP10.32□□□□□ -0.76
SOX2-OT-202ENST00000461063 DGKHQ86XP1 1220 aa10.32□□□□□ -0.76
SOX2-OT-202ENST00000461063 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.32□□□□□ -0.76
SOX2-OT-202ENST00000461063 TMEM199Q8N511 208 aa10.32□□□□□ -0.76
SOX2-OT-202ENST00000461063 EXOC6Q8TAG9 804 aa10.32□□□□□ -0.76
SOX2-OT-202ENST00000461063 MYLIPQ8WY64 445 aa10.32□□□□□ -0.76
SOX2-OT-202ENST00000461063 ZKSCAN3Q9BRR0 538 aa10.32□□□□□ -0.76
SOX2-OT-202ENST00000461063 WDR11Q9BZH6 1224 aa10.32□□□□□ -0.76
SOX2-OT-202ENST00000461063 DIAPH3Q9NSV4 1193 aa10.32□□□□□ -0.76
SOX2-OT-202ENST00000461063 PNMA2Q9UL42 364 aa10.32□□□□□ -0.76
SOX2-OT-202ENST00000461063 LRRC37A2A6NM11 1700 aa10.32□□□□□ -0.76
SOX2-OT-202ENST00000461063 MCM3APO60318 1980 aa10.32□□□□□ -0.76
SOX2-OT-202ENST00000461063 KDM4AO75164 1064 aa10.31□□□□□ -0.76
SOX2-OT-202ENST00000461063 GOLGA8HP0CJ92 632 aa10.31□□□□□ -0.76
SOX2-OT-202ENST00000461063 ACRP10323 421 aa10.31□□□□□ -0.76
SOX2-OT-202ENST00000461063 CALML3P27482 149 aa10.31□□□□□ -0.76
SOX2-OT-202ENST00000461063 NT5C2P49902 561 aa10.31□□□□□ -0.76
SOX2-OT-202ENST00000461063 PSMC6P62333 389 aa10.31□□□□□ -0.76
SOX2-OT-202ENST00000461063 RPS6P62753 249 aaKnown RBP10.31□□□□□ -0.76
SOX2-OT-202ENST00000461063 GPATCH4Q5T3I0 446 aaKnown RBP10.31□□□□□ -0.76
SOX2-OT-202ENST00000461063 RNF207Q6ZRF8 634 aa10.31□□□□□ -0.76
SOX2-OT-202ENST00000461063 ZNF365Q70YC5 407 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms