RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 TAPT1Q6NXT6 567 aa7.11□□□□□ -1.27
HLA-DPA3-207ENST00000454398 NEDD1Q8NHV4 660 aa7.11□□□□□ -1.27
HLA-DPA3-207ENST00000454398 HERVK_113Q902F9 699 aa7.11□□□□□ -1.27
HLA-DPA3-207ENST00000454398 COPS5Q92905 334 aa7.11□□□□□ -1.27
HLA-DPA3-207ENST00000454398 KHSRPQ92945 711 aaKnown RBP eCLIP7.11□□□□□ -1.27
HLA-DPA3-207ENST00000454398 GMCL1Q96IK5 515 aa7.11□□□□□ -1.27
HLA-DPA3-207ENST00000454398 ASB2Q96Q27 587 aa7.11□□□□□ -1.27
HLA-DPA3-207ENST00000454398 AP5M1Q9H0R1 490 aa7.11□□□□□ -1.27
HLA-DPA3-207ENST00000454398 ALDH8A1Q9H2A2 487 aaPredicted RBP7.11□□□□□ -1.27
HLA-DPA3-207ENST00000454398 GPCPD1Q9NPB8 672 aa7.11□□□□□ -1.27
HLA-DPA3-207ENST00000454398 TOMM22Q9NS69 142 aa7.11□□□□□ -1.27
HLA-DPA3-207ENST00000454398 MSRAQ9UJ68 235 aa7.11□□□□□ -1.27
HLA-DPA3-207ENST00000454398 PIEZO1Q92508 2521 aa7.1□□□□□ -1.27
HLA-DPA3-207ENST00000454398 TNKSO95271 1327 aa7.1□□□□□ -1.27
HLA-DPA3-207ENST00000454398 TRIP12Q14669 1992 aaPredicted RBP7.1□□□□□ -1.27
HLA-DPA3-207ENST00000454398 A0A0D9SFI3 127 aa7.1□□□□□ -1.27
HLA-DPA3-207ENST00000454398 PTPDC1A2A3K4 754 aa7.1□□□□□ -1.27
HLA-DPA3-207ENST00000454398 LCHNA4D1U4 455 aa7.1□□□□□ -1.27
HLA-DPA3-207ENST00000454398 SORBS3O60504 671 aa7.1□□□□□ -1.27
HLA-DPA3-207ENST00000454398 RANBP6O60518 1105 aaKnown RBP7.1□□□□□ -1.27
HLA-DPA3-207ENST00000454398 CALML3P27482 149 aa7.1□□□□□ -1.27
HLA-DPA3-207ENST00000454398 HAND2P61296 217 aa7.1□□□□□ -1.27
HLA-DPA3-207ENST00000454398 PURAQ00577 322 aaKnown RBP7.1□□□□□ -1.27
HLA-DPA3-207ENST00000454398 PDE4BQ07343 736 aa7.1□□□□□ -1.27
HLA-DPA3-207ENST00000454398 BAATQ14032 418 aaPredicted RBP7.1□□□□□ -1.27
HLA-DPA3-207ENST00000454398 GPNMBQ14956 572 aa7.1□□□□□ -1.27
HLA-DPA3-207ENST00000454398 ZMYM1Q5SVZ6 1142 aa7.1□□□□□ -1.27
HLA-DPA3-207ENST00000454398 GIMAP6Q6P9H5 292 aa7.1□□□□□ -1.27
HLA-DPA3-207ENST00000454398 KIAA1211Q6ZU35 1233 aa7.1□□□□□ -1.27
HLA-DPA3-207ENST00000454398 TBC1D10CQ8IV04 446 aa7.1□□□□□ -1.27
HLA-DPA3-207ENST00000454398 OR6J1Q8NGC5 347 aa7.1□□□□□ -1.27
HLA-DPA3-207ENST00000454398 GDPD5Q8WTR4 605 aa7.1□□□□□ -1.27
HLA-DPA3-207ENST00000454398 SYMPKQ92797 1274 aaKnown RBP7.1□□□□□ -1.27
HLA-DPA3-207ENST00000454398 MKL1Q969V6 931 aa7.1□□□□□ -1.27
HLA-DPA3-207ENST00000454398 FAM227BQ96M60 508 aa7.1□□□□□ -1.27
HLA-DPA3-207ENST00000454398 CTAGE1Q96RT6 745 aa7.1□□□□□ -1.27
HLA-DPA3-207ENST00000454398 SLC28A3Q9HAS3 691 aa7.1□□□□□ -1.27
HLA-DPA3-207ENST00000454398 MTUS1Q9ULD2 1270 aa7.1□□□□□ -1.27
HLA-DPA3-207ENST00000454398 PCDHB15Q9Y5E8 787 aa7.1□□□□□ -1.27
HLA-DPA3-207ENST00000454398 SLC4A7Q9Y6M7 1214 aa7.1□□□□□ -1.27
HLA-DPA3-207ENST00000454398 MYO7AQ13402 2215 aa7.09□□□□□ -1.27
HLA-DPA3-207ENST00000454398 NEDD4P46934 1319 aa7.09□□□□□ -1.27
HLA-DPA3-207ENST00000454398 SALL3Q9BXA9 1300 aa7.09□□□□□ -1.27
HLA-DPA3-207ENST00000454398 FAM86C2PA6NEL3 165 aa7.09□□□□□ -1.27
HLA-DPA3-207ENST00000454398 ASB14A6NK59 587 aa7.09□□□□□ -1.27
HLA-DPA3-207ENST00000454398 PATL2C9JE40 543 aaKnown RBP7.09□□□□□ -1.27
HLA-DPA3-207ENST00000454398 ARIH2O95376 493 aa7.09□□□□□ -1.27
HLA-DPA3-207ENST00000454398 FGBP02675 491 aa7.09□□□□□ -1.27
HLA-DPA3-207ENST00000454398 ICAM1P05362 532 aa7.09□□□□□ -1.27
HLA-DPA3-207ENST00000454398 ZFYP08048 801 aaPredicted RBP7.09□□□□□ -1.27
HLA-DPA3-207ENST00000454398 MS4A1P11836 297 aa7.09□□□□□ -1.27
HLA-DPA3-207ENST00000454398 GNAT2P19087 354 aa7.09□□□□□ -1.27
HLA-DPA3-207ENST00000454398 MX1P20591 662 aa7.09□□□□□ -1.27
HLA-DPA3-207ENST00000454398 ALDH5A1P51649 535 aaPredicted RBP7.09□□□□□ -1.27
HLA-DPA3-207ENST00000454398 MRPS5P82675 430 aaKnown RBP7.09□□□□□ -1.27
HLA-DPA3-207ENST00000454398 USH1GQ495M9 461 aa7.09□□□□□ -1.27
HLA-DPA3-207ENST00000454398 AKNAD1Q5T1N1 836 aa7.09□□□□□ -1.27
HLA-DPA3-207ENST00000454398 SYDE2Q5VT97 1194 aa7.09□□□□□ -1.27
HLA-DPA3-207ENST00000454398 ZNF589Q86UQ0 364 aaPredicted RBP7.09□□□□□ -1.27
HLA-DPA3-207ENST00000454398 FAM160B2Q86V87 743 aa7.09□□□□□ -1.27
HLA-DPA3-207ENST00000454398 IL27Q8NEV9 243 aa7.09□□□□□ -1.27
HLA-DPA3-207ENST00000454398 STAG1Q8WVM7 1258 aa7.09□□□□□ -1.27
HLA-DPA3-207ENST00000454398 ARNTL2Q8WYA1 636 aa7.09□□□□□ -1.27
HLA-DPA3-207ENST00000454398 WDR11Q9BZH6 1224 aa7.09□□□□□ -1.27
HLA-DPA3-207ENST00000454398 NACAP1Q9BZK3 213 aa7.09□□□□□ -1.27
HLA-DPA3-207ENST00000454398 MTIF3Q9H2K0 278 aaKnown RBP7.09□□□□□ -1.27
HLA-DPA3-207ENST00000454398 MYH6P13533 1939 aa7.09□□□□□ -1.27
HLA-DPA3-207ENST00000454398 ZNF286BP0CG31 522 aa7.08□□□□□ -1.28
HLA-DPA3-207ENST00000454398 GOLGA8HP0CJ92 632 aa7.08□□□□□ -1.28
HLA-DPA3-207ENST00000454398 NOVP48745 357 aa7.08□□□□□ -1.28
HLA-DPA3-207ENST00000454398 DEFB103AP81534 67 aa7.08□□□□□ -1.28
HLA-DPA3-207ENST00000454398 PPP2R5BQ15173 497 aa7.08□□□□□ -1.28
HLA-DPA3-207ENST00000454398 NBPF20Q3BBV1 942 aa7.08□□□□□ -1.28
HLA-DPA3-207ENST00000454398 DUSP28Q4G0W2 176 aa7.08□□□□□ -1.28
HLA-DPA3-207ENST00000454398 FAM117BQ6P1L5 589 aa7.08□□□□□ -1.28
HLA-DPA3-207ENST00000454398 CHURC1Q8WUH1 139 aa7.08□□□□□ -1.28
HLA-DPA3-207ENST00000454398 ATXN2LQ8WWM7 1075 aaKnown RBP7.08□□□□□ -1.28
HLA-DPA3-207ENST00000454398 CLEC4DQ8WXI8 215 aa7.08□□□□□ -1.28
HLA-DPA3-207ENST00000454398 TMEM47Q9BQJ4 181 aa7.08□□□□□ -1.28
HLA-DPA3-207ENST00000454398 ZKSCAN3Q9BRR0 538 aa7.08□□□□□ -1.28
HLA-DPA3-207ENST00000454398 RANBP17Q9H2T7 1088 aaKnown RBP7.08□□□□□ -1.28
HLA-DPA3-207ENST00000454398 DCTPP1Q9H773 170 aa7.08□□□□□ -1.28
HLA-DPA3-207ENST00000454398 ZNF287Q9HBT7 754 aa7.08□□□□□ -1.28
HLA-DPA3-207ENST00000454398 VTA1Q9NP79 307 aa7.08□□□□□ -1.28
HLA-DPA3-207ENST00000454398 C5orf42Q9H799 3197 aa7.08□□□□□ -1.28
HLA-DPA3-207ENST00000454398 WDFY4Q6ZS81 3184 aa7.07□□□□□ -1.28
HLA-DPA3-207ENST00000454398 SIP14410 1827 aa7.07□□□□□ -1.28
HLA-DPA3-207ENST00000454398 LPXNO60711 386 aa7.07□□□□□ -1.28
HLA-DPA3-207ENST00000454398 CABYRO75952 493 aa7.07□□□□□ -1.28
HLA-DPA3-207ENST00000454398 CSPG5O95196 566 aa7.07□□□□□ -1.28
HLA-DPA3-207ENST00000454398 SLC3A2P08195 630 aaKnown RBP7.07□□□□□ -1.28
HLA-DPA3-207ENST00000454398 PDHBP11177 359 aa7.07□□□□□ -1.28
HLA-DPA3-207ENST00000454398 RPS6P62753 249 aaKnown RBP7.07□□□□□ -1.28
HLA-DPA3-207ENST00000454398 TAP1Q03518 808 aa7.07□□□□□ -1.28
HLA-DPA3-207ENST00000454398 PDE4DQ08499 809 aa7.07□□□□□ -1.28
HLA-DPA3-207ENST00000454398 TKFCQ3LXA3 575 aa7.07□□□□□ -1.28
HLA-DPA3-207ENST00000454398 TMEM67Q5HYA8 995 aa7.07□□□□□ -1.28
HLA-DPA3-207ENST00000454398 RCSD1Q6JBY9 416 aa7.07□□□□□ -1.28
HLA-DPA3-207ENST00000454398 CHST3Q7LGC8 479 aa7.07□□□□□ -1.28
HLA-DPA3-207ENST00000454398 MORC4Q8TE76 937 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms