RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 STRNO43815 780 aa10.11□□□□□ -0.79
COL28A1-205ENST00000453441 DHX16O60231 1041 aaKnown RBP10.11□□□□□ -0.79
COL28A1-205ENST00000453441 STAT3P40763 770 aa10.11□□□□□ -0.79
COL28A1-205ENST00000453441 PKN2Q16513 984 aaKnown RBP10.11□□□□□ -0.79
COL28A1-205ENST00000453441 RTN1Q16799 776 aa10.11□□□□□ -0.79
COL28A1-205ENST00000453441 RIOX2Q8IUF8 465 aa10.11□□□□□ -0.79
COL28A1-205ENST00000453441 TEX2Q8IWB9 1127 aa10.11□□□□□ -0.79
COL28A1-205ENST00000453441 REPS2Q8NFH8 660 aa10.11□□□□□ -0.79
COL28A1-205ENST00000453441 NLRP7Q8WX94 980 aa10.11□□□□□ -0.79
COL28A1-205ENST00000453441 SOCS4Q8WXH5 440 aa10.11□□□□□ -0.79
COL28A1-205ENST00000453441 COA7Q96BR5 231 aa10.11□□□□□ -0.79
COL28A1-205ENST00000453441 TCEANC2Q96MN5 208 aa10.11□□□□□ -0.79
COL28A1-205ENST00000453441 LRRC2Q9BYS8 371 aa10.11□□□□□ -0.79
COL28A1-205ENST00000453441 UPF3BQ9BZI7 483 aaKnown RBP10.11□□□□□ -0.79
COL28A1-205ENST00000453441 SPATC1LQ9H0A9 340 aa10.11□□□□□ -0.79
COL28A1-205ENST00000453441 SENP2Q9HC62 589 aa10.11□□□□□ -0.79
COL28A1-205ENST00000453441 GPCPD1Q9NPB8 672 aa10.11□□□□□ -0.79
COL28A1-205ENST00000453441 MAD2L2Q9UI95 211 aa10.11□□□□□ -0.79
COL28A1-205ENST00000453441 ZNF214Q9UL59 606 aaPredicted RBP10.11□□□□□ -0.79
COL28A1-205ENST00000453441 MGAMO43451 1857 aa10.1□□□□□ -0.79
COL28A1-205ENST00000453441 COL11A1P12107 1806 aaPredicted RBP10.1□□□□□ -0.79
COL28A1-205ENST00000453441 GOLGA8AA7E2F4 631 aa10.1□□□□□ -0.79
COL28A1-205ENST00000453441 GOLGA8BA8MQT2 603 aa10.1□□□□□ -0.79
COL28A1-205ENST00000453441 TNPO2O14787 897 aaKnown RBP10.1□□□□□ -0.79
COL28A1-205ENST00000453441 CNMDO75829 334 aa10.1□□□□□ -0.79
COL28A1-205ENST00000453441 ICAM1P05362 532 aa10.1□□□□□ -0.79
COL28A1-205ENST00000453441 GOLGA8HP0CJ92 632 aa10.1□□□□□ -0.79
COL28A1-205ENST00000453441 CPA1P15085 419 aa10.1□□□□□ -0.79
COL28A1-205ENST00000453441 CLCN1P35523 988 aa10.1□□□□□ -0.79
COL28A1-205ENST00000453441 MCM2P49736 904 aa10.1□□□□□ -0.79
COL28A1-205ENST00000453441 METAP2P50579 478 aaKnown RBP eCLIP10.1□□□□□ -0.79
COL28A1-205ENST00000453441 NEK4P51957 841 aa10.1□□□□□ -0.79
COL28A1-205ENST00000453441 LBX1P52954 281 aa10.1□□□□□ -0.79
COL28A1-205ENST00000453441 TOB2Q14106 344 aaPredicted RBP10.1□□□□□ -0.79
COL28A1-205ENST00000453441 TMEM132BQ14DG7 1078 aa10.1□□□□□ -0.79
COL28A1-205ENST00000453441 CPLX2Q6PUV4 134 aaKnown RBP10.1□□□□□ -0.79
COL28A1-205ENST00000453441 MICU3Q86XE3 530 aa10.1□□□□□ -0.79
COL28A1-205ENST00000453441 ADGRF4Q8IZF3 695 aa10.1□□□□□ -0.79
COL28A1-205ENST00000453441 ABRAQ8N0Z2 381 aa10.1□□□□□ -0.79
COL28A1-205ENST00000453441 RDH13Q8NBN7 331 aa10.1□□□□□ -0.79
COL28A1-205ENST00000453441 CHST13Q8NET6 341 aa10.1□□□□□ -0.79
COL28A1-205ENST00000453441 R3HDMLQ9H3Y0 253 aa10.1□□□□□ -0.79
COL28A1-205ENST00000453441 RIOX1Q9H6W3 641 aa10.1□□□□□ -0.79
COL28A1-205ENST00000453441 CWC22Q9HCG8 908 aaKnown RBP10.1□□□□□ -0.79
COL28A1-205ENST00000453441 TXNRD2Q9NNW7 524 aa10.1□□□□□ -0.79
COL28A1-205ENST00000453441 BTBD7Q9P203 1132 aa10.1□□□□□ -0.79
COL28A1-205ENST00000453441 BRPF3Q9ULD4 1205 aa10.1□□□□□ -0.79
COL28A1-205ENST00000453441 IVNS1ABPQ9Y6Y0 642 aa10.1□□□□□ -0.79
COL28A1-205ENST00000453441 ZNF236Q9UL36 1845 aa10.1□□□□□ -0.79
COL28A1-205ENST00000453441 CASP8AP2Q9UKL3 1982 aa10.09□□□□□ -0.79
COL28A1-205ENST00000453441 hCG_1984214I3L0E3 225 aa10.09□□□□□ -0.79
COL28A1-205ENST00000453441 ZBTB5O15062 677 aa10.09□□□□□ -0.79
COL28A1-205ENST00000453441 CDKL5O76039 1030 aa10.09□□□□□ -0.79
COL28A1-205ENST00000453441 FMNL1O95466 1100 aaPredicted RBP10.09□□□□□ -0.79
COL28A1-205ENST00000453441 SLC16A2P36021 539 aa10.09□□□□□ -0.79
COL28A1-205ENST00000453441 PSMC4P43686 418 aa10.09□□□□□ -0.79
COL28A1-205ENST00000453441 AK2P54819 239 aa10.09□□□□□ -0.79
COL28A1-205ENST00000453441 APOBRQ0VD83 1088 aa10.09□□□□□ -0.79
COL28A1-205ENST00000453441 COL9A3Q14050 684 aaPredicted RBP10.09□□□□□ -0.79
COL28A1-205ENST00000453441 PLS1Q14651 629 aa10.09□□□□□ -0.79
COL28A1-205ENST00000453441 CDC37Q16543 378 aaPredicted RBP10.09□□□□□ -0.79
COL28A1-205ENST00000453441 SNRNP48Q6IEG0 339 aaKnown RBP10.09□□□□□ -0.79
COL28A1-205ENST00000453441 TTBK2Q6IQ55 1244 aa10.09□□□□□ -0.79
COL28A1-205ENST00000453441 TMTC3Q6ZXV5 915 aa10.09□□□□□ -0.79
COL28A1-205ENST00000453441 PLEKHH3Q7Z736 793 aa10.09□□□□□ -0.79
COL28A1-205ENST00000453441 CTU1Q7Z7A3 348 aaKnown RBP10.09□□□□□ -0.79
COL28A1-205ENST00000453441 ZNF713Q8N859 430 aaPredicted RBP10.09□□□□□ -0.79
COL28A1-205ENST00000453441 MTMR8Q96EF0 704 aa10.09□□□□□ -0.79
COL28A1-205ENST00000453441 RRP36Q96EU6 259 aaKnown RBP10.09□□□□□ -0.79
COL28A1-205ENST00000453441 AMNQ9BXJ7 453 aa10.09□□□□□ -0.79
COL28A1-205ENST00000453441 MOV10L1Q9BXT6 1211 aaKnown RBP10.09□□□□□ -0.79
COL28A1-205ENST00000453441 EFCC1Q9HA90 598 aa10.09□□□□□ -0.79
COL28A1-205ENST00000453441 SLC5A4Q9NY91 659 aa10.09□□□□□ -0.79
COL28A1-205ENST00000453441 SEC63Q9UGP8 760 aaKnown RBP10.09□□□□□ -0.79
COL28A1-205ENST00000453441 MYH6P13533 1939 aa10.09□□□□□ -0.79
COL28A1-205ENST00000453441 ABCB11O95342 1321 aa10.08□□□□□ -0.8
COL28A1-205ENST00000453441 PNMA6FA0A0J9YX94 578 aa10.08□□□□□ -0.8
COL28A1-205ENST00000453441 SLC15A5A6NIM6 579 aa10.08□□□□□ -0.8
COL28A1-205ENST00000453441 FCER1AP12319 257 aa10.08□□□□□ -0.8
COL28A1-205ENST00000453441 PDIA3P30101 505 aaKnown RBP10.08□□□□□ -0.8
COL28A1-205ENST00000453441 MDM2Q00987 491 aaPredicted RBP10.08□□□□□ -0.8
COL28A1-205ENST00000453441 IRF5Q13568 498 aa10.08□□□□□ -0.8
COL28A1-205ENST00000453441 RASGRP2Q7LDG7 609 aa10.08□□□□□ -0.8
COL28A1-205ENST00000453441 GPR142Q7Z601 462 aa10.08□□□□□ -0.8
COL28A1-205ENST00000453441 NCAPG2Q86XI2 1143 aa10.08□□□□□ -0.8
COL28A1-205ENST00000453441 TRMT44Q8IYL2 757 aaKnown RBP10.08□□□□□ -0.8
COL28A1-205ENST00000453441 CPXCR1Q8N123 301 aa10.08□□□□□ -0.8
COL28A1-205ENST00000453441 FAM177A1Q8N128 213 aaPredicted RBP10.08□□□□□ -0.8
COL28A1-205ENST00000453441 STAG2Q8N3U4 1231 aa10.08□□□□□ -0.8
COL28A1-205ENST00000453441 SAMD3Q8N6K7 520 aa10.08□□□□□ -0.8
COL28A1-205ENST00000453441 RGS22Q8NE09 1264 aa10.08□□□□□ -0.8
COL28A1-205ENST00000453441 CD99L2Q8TCZ2 262 aa10.08□□□□□ -0.8
COL28A1-205ENST00000453441 ZSCAN31Q96LW9 406 aaPredicted RBP10.08□□□□□ -0.8
COL28A1-205ENST00000453441 KIF2CQ99661 725 aa10.08□□□□□ -0.8
COL28A1-205ENST00000453441 NUDT12Q9BQG2 462 aa10.08□□□□□ -0.8
COL28A1-205ENST00000453441 MYL10Q9BUA6 226 aa10.08□□□□□ -0.8
COL28A1-205ENST00000453441 UBA5Q9GZZ9 404 aa10.08□□□□□ -0.8
COL28A1-205ENST00000453441 ACAD9Q9H845 621 aa10.08□□□□□ -0.8
COL28A1-205ENST00000453441 JMJD4Q9H9V9 463 aa10.08□□□□□ -0.8
COL28A1-205ENST00000453441 MAP3K20Q9NYL2 800 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms