RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 CCDC96Q2M329 555 aa10.44□□□□□ -0.74
DEPDC1B-202ENST00000453022 IQSEC1Q6DN90 963 aa10.44□□□□□ -0.74
DEPDC1B-202ENST00000453022 BTNL9Q6UXG8 535 aa10.44□□□□□ -0.74
DEPDC1B-202ENST00000453022 AP5M1Q9H0R1 490 aa10.44□□□□□ -0.74
DEPDC1B-202ENST00000453022 PRDM12Q9H4Q4 367 aa10.44□□□□□ -0.74
DEPDC1B-202ENST00000453022 VTA1Q9NP79 307 aa10.44□□□□□ -0.74
DEPDC1B-202ENST00000453022 YBX2Q9Y2T7 364 aaKnown RBP10.44□□□□□ -0.74
DEPDC1B-202ENST00000453022 TRIP12Q14669 1992 aaPredicted RBP10.44□□□□□ -0.74
DEPDC1B-202ENST00000453022 BDP1A6H8Y1 2624 aa10.44□□□□□ -0.74
DEPDC1B-202ENST00000453022 A0A0D9SFI3 127 aa10.43□□□□□ -0.74
DEPDC1B-202ENST00000453022 ALDH5A1P51649 535 aaPredicted RBP10.43□□□□□ -0.74
DEPDC1B-202ENST00000453022 CCL23P55773 120 aa10.43□□□□□ -0.74
DEPDC1B-202ENST00000453022 BAATQ14032 418 aaPredicted RBP10.43□□□□□ -0.74
DEPDC1B-202ENST00000453022 ADGRE1Q14246 886 aa10.43□□□□□ -0.74
DEPDC1B-202ENST00000453022 ALX1Q15699 326 aa10.43□□□□□ -0.74
DEPDC1B-202ENST00000453022 SLC30A10Q6XR72 485 aa10.43□□□□□ -0.74
DEPDC1B-202ENST00000453022 FAM227BQ96M60 508 aa10.43□□□□□ -0.74
DEPDC1B-202ENST00000453022 TMEM47Q9BQJ4 181 aa10.43□□□□□ -0.74
DEPDC1B-202ENST00000453022 Q9Y3F1 56 aa10.43□□□□□ -0.74
DEPDC1B-202ENST00000453022 TET1Q8NFU7 2136 aa10.43□□□□□ -0.74
DEPDC1B-202ENST00000453022 COL4A4P53420 1690 aaPredicted RBP10.43□□□□□ -0.74
DEPDC1B-202ENST00000453022 FRMPD2Q68DX3 1309 aaPredicted RBP10.43□□□□□ -0.74
DEPDC1B-202ENST00000453022 FGBP02675 491 aa10.43□□□□□ -0.74
DEPDC1B-202ENST00000453022 DUSP28Q4G0W2 176 aa10.43□□□□□ -0.74
DEPDC1B-202ENST00000453022 TJAP1Q5JTD0 557 aa10.43□□□□□ -0.74
DEPDC1B-202ENST00000453022 SYDE2Q5VT97 1194 aa10.43□□□□□ -0.74
DEPDC1B-202ENST00000453022 KIAA1211Q6ZU35 1233 aa10.43□□□□□ -0.74
DEPDC1B-202ENST00000453022 OTOP2Q7RTS6 562 aa10.43□□□□□ -0.74
DEPDC1B-202ENST00000453022 CLEC4DQ8WXI8 215 aa10.43□□□□□ -0.74
DEPDC1B-202ENST00000453022 EVI5LQ96CN4 794 aa10.43□□□□□ -0.74
DEPDC1B-202ENST00000453022 GAS2L1Q99501 681 aaPredicted RBP10.43□□□□□ -0.74
DEPDC1B-202ENST00000453022 ALDH8A1Q9H2A2 487 aaPredicted RBP10.43□□□□□ -0.74
DEPDC1B-202ENST00000453022 NKX2-4Q9H2Z4 354 aa10.43□□□□□ -0.74
DEPDC1B-202ENST00000453022 TCF20Q9UGU0 1960 aaKnown RBP10.42□□□□□ -0.74
DEPDC1B-202ENST00000453022 RBM47A0AV96 593 aaKnown RBP10.42□□□□□ -0.74
DEPDC1B-202ENST00000453022 ZEB2O60315 1214 aa10.42□□□□□ -0.74
DEPDC1B-202ENST00000453022 FGAP02671 866 aa10.42□□□□□ -0.74
DEPDC1B-202ENST00000453022 TOP1P11387 765 aaKnown RBP10.42□□□□□ -0.74
DEPDC1B-202ENST00000453022 PDE1AP54750 535 aa10.42□□□□□ -0.74
DEPDC1B-202ENST00000453022 PURAQ00577 322 aaKnown RBP10.42□□□□□ -0.74
DEPDC1B-202ENST00000453022 RAB30Q15771 203 aa10.42□□□□□ -0.74
DEPDC1B-202ENST00000453022 RRP12Q5JTH9 1297 aaKnown RBP10.42□□□□□ -0.74
DEPDC1B-202ENST00000453022 AKNAD1Q5T1N1 836 aa10.42□□□□□ -0.74
DEPDC1B-202ENST00000453022 ZNF589Q86UQ0 364 aaPredicted RBP10.42□□□□□ -0.74
DEPDC1B-202ENST00000453022 PPM1EQ8WY54 764 aa10.42□□□□□ -0.74
DEPDC1B-202ENST00000453022 SYMPKQ92797 1274 aaKnown RBP10.42□□□□□ -0.74
DEPDC1B-202ENST00000453022 SCLYQ96I15 445 aa10.42□□□□□ -0.74
DEPDC1B-202ENST00000453022 SEZ6LQ9BYH1 1024 aa10.42□□□□□ -0.74
DEPDC1B-202ENST00000453022 GPCPD1Q9NPB8 672 aa10.42□□□□□ -0.74
DEPDC1B-202ENST00000453022 HELLSQ9NRZ9 838 aa10.42□□□□□ -0.74
DEPDC1B-202ENST00000453022 TRMT13Q9NUP7 481 aaKnown RBP10.42□□□□□ -0.74
DEPDC1B-202ENST00000453022 MSRAQ9UJ68 235 aa10.42□□□□□ -0.74
DEPDC1B-202ENST00000453022 MYH7BA7E2Y1 1941 aa10.42□□□□□ -0.74
DEPDC1B-202ENST00000453022 ZMYM6O95789 1325 aa10.41□□□□□ -0.74
DEPDC1B-202ENST00000453022 PTPDC1A2A3K4 754 aa10.41□□□□□ -0.74
DEPDC1B-202ENST00000453022 PDHBP11177 359 aa10.41□□□□□ -0.74
DEPDC1B-202ENST00000453022 CYP2C9P11712 490 aa10.41□□□□□ -0.74
DEPDC1B-202ENST00000453022 RABGGTBP53611 331 aa10.41□□□□□ -0.74
DEPDC1B-202ENST00000453022 ANKRD45Q5TZF3 282 aa10.41□□□□□ -0.74
DEPDC1B-202ENST00000453022 WDR11Q9BZH6 1224 aa10.41□□□□□ -0.74
DEPDC1B-202ENST00000453022 MTIF3Q9H2K0 278 aaKnown RBP10.41□□□□□ -0.74
DEPDC1B-202ENST00000453022 TOMM22Q9NS69 142 aa10.41□□□□□ -0.74
DEPDC1B-202ENST00000453022 TCP11L1Q9NUJ3 509 aa10.41□□□□□ -0.74
DEPDC1B-202ENST00000453022 ADD3Q9UEY8 706 aaKnown RBP10.41□□□□□ -0.74
DEPDC1B-202ENST00000453022 TNKSO95271 1327 aa10.41□□□□□ -0.74
DEPDC1B-202ENST00000453022 LOC102724159A0A0B4J2E5 919 aa10.4□□□□□ -0.74
DEPDC1B-202ENST00000453022 SNHG28P0DPA3 235 aa10.4□□□□□ -0.74
DEPDC1B-202ENST00000453022 HSPD1P10809 573 aaKnown RBP10.4□□□□□ -0.74
DEPDC1B-202ENST00000453022 MYOGP15173 224 aa10.4□□□□□ -0.74
DEPDC1B-202ENST00000453022 EDNRBP24530 442 aa10.4□□□□□ -0.74
DEPDC1B-202ENST00000453022 CALML3P27482 149 aa10.4□□□□□ -0.74
DEPDC1B-202ENST00000453022 RRP1P56182 461 aaKnown RBP10.4□□□□□ -0.74
DEPDC1B-202ENST00000453022 HAND2P61296 217 aa10.4□□□□□ -0.74
DEPDC1B-202ENST00000453022 ZNF543Q08ER8 600 aa10.4□□□□□ -0.74
DEPDC1B-202ENST00000453022 NMIQ13287 307 aaPredicted RBP10.4□□□□□ -0.74
DEPDC1B-202ENST00000453022 PWP2Q15269 919 aaKnown RBP10.4□□□□□ -0.74
DEPDC1B-202ENST00000453022 MCMDC2Q4G0Z9 681 aa10.4□□□□□ -0.74
DEPDC1B-202ENST00000453022 TBC1D10CQ8IV04 446 aa10.4□□□□□ -0.74
DEPDC1B-202ENST00000453022 PPP1R13LQ8WUF5 828 aa10.4□□□□□ -0.74
DEPDC1B-202ENST00000453022 POLR3EQ9NVU0 708 aa10.4□□□□□ -0.74
DEPDC1B-202ENST00000453022 THEGQ9P2T0 379 aa10.4□□□□□ -0.74
DEPDC1B-202ENST00000453022 NEDD4P46934 1319 aa10.4□□□□□ -0.74
DEPDC1B-202ENST00000453022 MYL3P08590 195 aa10.39□□□□□ -0.75
DEPDC1B-202ENST00000453022 CPT1AP50416 773 aa10.39□□□□□ -0.75
DEPDC1B-202ENST00000453022 RPS6P62753 249 aaKnown RBP10.39□□□□□ -0.75
DEPDC1B-202ENST00000453022 TTLL4Q14679 1199 aa10.39□□□□□ -0.75
DEPDC1B-202ENST00000453022 CCDC85BQ15834 202 aaPredicted RBP10.39□□□□□ -0.75
DEPDC1B-202ENST00000453022 RNF207Q6ZRF8 634 aa10.39□□□□□ -0.75
DEPDC1B-202ENST00000453022 OR6J1Q8NGC5 347 aa10.39□□□□□ -0.75
DEPDC1B-202ENST00000453022 COPS5Q92905 334 aa10.39□□□□□ -0.75
DEPDC1B-202ENST00000453022 CRBNQ96SW2 442 aa10.39□□□□□ -0.75
DEPDC1B-202ENST00000453022 SLC28A3Q9HAS3 691 aa10.39□□□□□ -0.75
DEPDC1B-202ENST00000453022 SLC4A7Q9Y6M7 1214 aa10.39□□□□□ -0.75
DEPDC1B-202ENST00000453022 CCDC171Q6TFL3 1326 aa10.39□□□□□ -0.75
DEPDC1B-202ENST00000453022 WDR19Q8NEZ3 1342 aa10.39□□□□□ -0.75
DEPDC1B-202ENST00000453022 NCOR1O75376 2440 aa10.39□□□□□ -0.75
DEPDC1B-202ENST00000453022 PRRC2BQ5JSZ5 2229 aaKnown RBP10.39□□□□□ -0.75
DEPDC1B-202ENST00000453022 TNFRSF10AO00220 468 aa10.39□□□□□ -0.75
DEPDC1B-202ENST00000453022 ARIH2O95376 493 aa10.39□□□□□ -0.75
DEPDC1B-202ENST00000453022 IGFBP4P22692 258 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms