RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 PNMA2Q9UL42 364 aa21.57■■□□□ 1.04
PDLIM2-214ENST00000452226 UNC80Q8N2C7 3258 aa21.56■■□□□ 1.04
PDLIM2-214ENST00000452226 ALDH5A1P51649 535 aaPredicted RBP21.56■■□□□ 1.04
PDLIM2-214ENST00000452226 KIAA1211Q6ZU35 1233 aa21.56■■□□□ 1.04
PDLIM2-214ENST00000452226 DGKHQ86XP1 1220 aa21.56■■□□□ 1.04
PDLIM2-214ENST00000452226 CLEC4DQ8WXI8 215 aa21.56■■□□□ 1.04
PDLIM2-214ENST00000452226 SEMA6BQ9H3T3 888 aa21.56■■□□□ 1.04
PDLIM2-214ENST00000452226 TLR3O15455 904 aaKnown RBP21.55■■□□□ 1.04
PDLIM2-214ENST00000452226 ZEB2O60315 1214 aa21.55■■□□□ 1.04
PDLIM2-214ENST00000452226 KDM4AO75164 1064 aa21.55■■□□□ 1.04
PDLIM2-214ENST00000452226 CABYRO75952 493 aa21.55■■□□□ 1.04
PDLIM2-214ENST00000452226 GOLGA8HP0CJ92 632 aa21.55■■□□□ 1.04
PDLIM2-214ENST00000452226 NT5C2P49902 561 aa21.55■■□□□ 1.04
PDLIM2-214ENST00000452226 TMEM63BQ5T3F8 832 aa21.55■■□□□ 1.04
PDLIM2-214ENST00000452226 GPATCH4Q5T3I0 446 aaKnown RBP21.55■■□□□ 1.04
PDLIM2-214ENST00000452226 MFSD5Q6N075 450 aa21.55■■□□□ 1.04
PDLIM2-214ENST00000452226 SLC30A10Q6XR72 485 aa21.55■■□□□ 1.04
PDLIM2-214ENST00000452226 IQCA1Q86XH1 822 aa21.55■■□□□ 1.04
PDLIM2-214ENST00000452226 FAM126BQ8IXS8 530 aa21.55■■□□□ 1.04
PDLIM2-214ENST00000452226 CDX2Q99626 313 aaPredicted RBP21.55■■□□□ 1.04
PDLIM2-214ENST00000452226 Q9Y3F1 56 aa21.55■■□□□ 1.04
PDLIM2-214ENST00000452226 WDR19Q8NEZ3 1342 aa21.55■■□□□ 1.04
PDLIM2-214ENST00000452226 LOC102724159A0A0B4J2E5 919 aa21.54■■□□□ 1.04
PDLIM2-214ENST00000452226 CALML3P27482 149 aa21.54■■□□□ 1.04
PDLIM2-214ENST00000452226 PTH1RQ03431 593 aa21.54■■□□□ 1.04
PDLIM2-214ENST00000452226 PWP2Q15269 919 aaKnown RBP21.54■■□□□ 1.04
PDLIM2-214ENST00000452226 IMMTQ16891 758 aaKnown RBP21.54■■□□□ 1.04
PDLIM2-214ENST00000452226 CCDC178Q5BJE1 867 aa21.54■■□□□ 1.04
PDLIM2-214ENST00000452226 RNF207Q6ZRF8 634 aa21.54■■□□□ 1.04
PDLIM2-214ENST00000452226 MYH6P13533 1939 aa21.54■■□□□ 1.04
PDLIM2-214ENST00000452226 B4E1Z4 1266 aa21.53■■□□□ 1.04
PDLIM2-214ENST00000452226 SLC43A3Q8NBI5 491 aa21.53■■□□□ 1.04
PDLIM2-214ENST00000452226 PNMA1Q8ND90 353 aa21.53■■□□□ 1.04
PDLIM2-214ENST00000452226 CPVLQ9H3G5 476 aa21.53■■□□□ 1.04
PDLIM2-214ENST00000452226 KAT14Q9H8E8 782 aa21.53■■□□□ 1.04
PDLIM2-214ENST00000452226 TMEM265A0A087WTH1 108 aa21.52■■□□□ 1.04
PDLIM2-214ENST00000452226 CD4P01730 458 aa21.52■■□□□ 1.04
PDLIM2-214ENST00000452226 RPS6P62753 249 aaKnown RBP21.52■■□□□ 1.04
PDLIM2-214ENST00000452226 PPIGQ13427 754 aaKnown RBP eCLIP21.52■■□□□ 1.041e-8■■■□□ 18.4
PDLIM2-214ENST00000452226 ITGA7Q13683 1181 aa21.52■■□□□ 1.04
PDLIM2-214ENST00000452226 DUSP28Q4G0W2 176 aa21.52■■□□□ 1.04
PDLIM2-214ENST00000452226 MAFAQ8NHW3 353 aaPredicted RBP21.52■■□□□ 1.04
PDLIM2-214ENST00000452226 ZSCAN10Q96SZ4 725 aaPredicted RBP21.52■■□□□ 1.04
PDLIM2-214ENST00000452226 WDR11Q9BZH6 1224 aa21.52■■□□□ 1.04
PDLIM2-214ENST00000452226 PPP1R12CQ9BZL4 782 aa21.52■■□□□ 1.04
PDLIM2-214ENST00000452226 UBA5Q9GZZ9 404 aa21.52■■□□□ 1.04
PDLIM2-214ENST00000452226 MYO9BQ13459 2157 aa21.52■■□□□ 1.04
PDLIM2-214ENST00000452226 USH1GQ495M9 461 aa21.51■■□□□ 1.03
PDLIM2-214ENST00000452226 TMEM199Q8N511 208 aa21.51■■□□□ 1.03
PDLIM2-214ENST00000452226 ANKS1AQ92625 1134 aa21.51■■□□□ 1.03
PDLIM2-214ENST00000452226 MAP4K1Q92918 833 aa21.51■■□□□ 1.03
PDLIM2-214ENST00000452226 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.51■■□□□ 1.031e-6■■■■□ 22.3
PDLIM2-214ENST00000452226 COL25A1Q9BXS0 654 aaPredicted RBP21.51■■□□□ 1.03
PDLIM2-214ENST00000452226 TTYH1Q9H313 450 aaPredicted RBP21.51■■□□□ 1.03
PDLIM2-214ENST00000452226 PPP4R2Q9NY27 417 aa21.51■■□□□ 1.03
PDLIM2-214ENST00000452226 ZSWIM5Q9P217 1185 aa21.51■■□□□ 1.03
PDLIM2-214ENST00000452226 GRIN2DO15399 1336 aa21.51■■□□□ 1.03
PDLIM2-214ENST00000452226 CSF2RAP15509 400 aa21.5■■□□□ 1.03
PDLIM2-214ENST00000452226 PDE4DQ08499 809 aa21.5■■□□□ 1.03
PDLIM2-214ENST00000452226 ENAHQ8N8S7 591 aaPredicted RBP21.5■■□□□ 1.03
PDLIM2-214ENST00000452226 MPHOSPH6Q99547 160 aaKnown RBP21.5■■□□□ 1.03
PDLIM2-214ENST00000452226 ESYT1Q9BSJ8 1104 aa21.5■■□□□ 1.03
PDLIM2-214ENST00000452226 KRT23Q9C075 422 aa21.5■■□□□ 1.03
PDLIM2-214ENST00000452226 U3KPZ7 1027 aaPredicted RBP21.5■■□□□ 1.03
PDLIM2-214ENST00000452226 RBM47A0AV96 593 aaKnown RBP21.49■■□□□ 1.03
PDLIM2-214ENST00000452226 CYP21A2P08686 494 aa21.49■■□□□ 1.03
PDLIM2-214ENST00000452226 FOSL2P15408 326 aa21.49■■□□□ 1.03
PDLIM2-214ENST00000452226 CYP2C18P33260 490 aa21.49■■□□□ 1.03
PDLIM2-214ENST00000452226 PSMC6P62333 389 aa21.49■■□□□ 1.03
PDLIM2-214ENST00000452226 CDC37Q16543 378 aaPredicted RBP21.49■■□□□ 1.03
PDLIM2-214ENST00000452226 TMEM240Q5SV17 173 aa21.49■■□□□ 1.03
PDLIM2-214ENST00000452226 C16orf59Q7L2K0 433 aa21.49■■□□□ 1.03
PDLIM2-214ENST00000452226 DNERQ8NFT8 737 aa21.49■■□□□ 1.03
PDLIM2-214ENST00000452226 SEZ6LQ9BYH1 1024 aa21.49■■□□□ 1.03
PDLIM2-214ENST00000452226 CNNM2Q9H8M5 875 aa21.49■■□□□ 1.03
PDLIM2-214ENST00000452226 TNKSO95271 1327 aa21.49■■□□□ 1.03
PDLIM2-214ENST00000452226 EYSQ5T1H1 3165 aa21.48■■□□□ 1.03
PDLIM2-214ENST00000452226 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.48■■□□□ 1.03
PDLIM2-214ENST00000452226 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.48■■□□□ 1.03
PDLIM2-214ENST00000452226 EDNRBP24530 442 aa21.48■■□□□ 1.03
PDLIM2-214ENST00000452226 ASPRV1Q53RT3 343 aa21.48■■□□□ 1.03
PDLIM2-214ENST00000452226 ADGRF4Q8IZF3 695 aa21.48■■□□□ 1.03
PDLIM2-214ENST00000452226 RGS22Q8NE09 1264 aa21.48■■□□□ 1.03
PDLIM2-214ENST00000452226 MYLIPQ8WY64 445 aa21.48■■□□□ 1.03
PDLIM2-214ENST00000452226 UBAC1Q9BSL1 405 aa21.48■■□□□ 1.03
PDLIM2-214ENST00000452226 LSG1Q9H089 658 aaKnown RBP21.48■■□□□ 1.03
PDLIM2-214ENST00000452226 TRPV6Q9H1D0 765 aa21.48■■□□□ 1.03
PDLIM2-214ENST00000452226 HIPK3Q9H422 1215 aa21.48■■□□□ 1.03
PDLIM2-214ENST00000452226 PRUNE2Q8WUY3 3088 aa21.47■■□□□ 1.03
PDLIM2-214ENST00000452226 CDH23Q9H251 3354 aa21.47■■□□□ 1.03
PDLIM2-214ENST00000452226 B4DLN1 442 aa21.47■■□□□ 1.03
PDLIM2-214ENST00000452226 ACRP10323 421 aa21.47■■□□□ 1.03
PDLIM2-214ENST00000452226 CPT1AP50416 773 aa21.47■■□□□ 1.03
PDLIM2-214ENST00000452226 MRPL12P52815 198 aaKnown RBP21.47■■□□□ 1.03
PDLIM2-214ENST00000452226 PPP2R5BQ15173 497 aa21.47■■□□□ 1.03
PDLIM2-214ENST00000452226 OR6J1Q8NGC5 347 aa21.47■■□□□ 1.03
PDLIM2-214ENST00000452226 POLR3EQ9NVU0 708 aa21.47■■□□□ 1.03
PDLIM2-214ENST00000452226 B4GALT4O60513 344 aa21.46■■□□□ 1.03
PDLIM2-214ENST00000452226 MYL3P08590 195 aa21.46■■□□□ 1.03
PDLIM2-214ENST00000452226 PARP1P09874 1014 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms